PMC:7402624 / 208-701
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 212-216 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T2 | 223-227 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T3 | 294-298 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T4 | 354-365 | Body_part | denotes | plasmablast | http://purl.org/sig/ont/fma/fma84371 |
| T5 | 407-412 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T6 | 444-454 | Body_part | denotes | lymphocyte | http://purl.org/sig/ont/fma/fma62863 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 13 | 36-44 | Species | denotes | patients | Tax:9606 |
| 14 | 255-263 | Species | denotes | patients | Tax:9606 |
| 15 | 279-287 | Species | denotes | patients | Tax:9606 |
| 17 | 27-35 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 18 | 334-349 | Disease | denotes | viral infection | MESH:D001102 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T3 | 27-35 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 334-349 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T5 | 340-349 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 196-206 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
| T5 | 210-216 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T6 | 221-227 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B cell |
| T7 | 239-240 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T8 | 265-266 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T9 | 292-298 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T cell |
| T10 | 299-309 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
| T11 | 405-412 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B cells |
| T12 | 455-465 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 292-309 | http://purl.obolibrary.org/obo/GO_0042110 | denotes | T cell activation |
| T3 | 294-309 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | cell activation |
| T4 | 334-349 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
| T5 | 444-465 | http://purl.obolibrary.org/obo/GO_0046649 | denotes | lymphocyte activation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 11-125 | Sentence | denotes | We analyzed 125 COVID-19 patients, and compared recovered to healthy individuals using high dimensional cytometry. |
| T5 | 126-264 | Sentence | denotes | Integrated analysis of ~200 immune and ~50 clinical features revealed activation of T cell and B cell subsets in a proportion of patients. |
| T6 | 265-413 | Sentence | denotes | A subgroup of patients had T cell activation characteristic of acute viral infection and plasmablast responses reaching >30% of circulating B cells. |