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PMC:7402624 / 17044-17324 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T118 28-31 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T119 91-96 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T120 135-138 Body_part denotes HLA http://purl.org/sig/ont/fma/fma84795

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
574 85-88 Gene denotes CD8 Gene:925
575 129-133 Gene denotes CD38 Gene:952
576 149-153 Gene denotes CD39 Gene:953
577 159-162 Gene denotes PD1 Gene:6622
578 263-267 Gene denotes CD95 Gene:355
596 52-60 Species denotes patients Tax:9606
604 43-51 Disease denotes COVID-19 MESH:C000657245
605 70-72 Disease denotes HD MESH:D006816

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T128 43-51 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T129 70-72 Disease denotes HD http://purl.obolibrary.org/obo/MONDO_0007739
T130 76-78 Disease denotes RD http://purl.obolibrary.org/obo/MONDO_0009973
T131 275-278 Disease denotes FAS http://purl.obolibrary.org/obo/MONDO_0016011

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T277 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T278 76-78 http://purl.obolibrary.org/obo/CLO_0008770 denotes RD
T279 85-88 http://purl.obolibrary.org/obo/CLO_0053438 denotes CD8
T280 89-96 http://purl.obolibrary.org/obo/CL_0000084 denotes T cells
T281 129-133 http://purl.obolibrary.org/obo/PR_000001408 denotes CD38
T282 214-224 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T84 70-72 Chemical denotes HD http://purl.obolibrary.org/obo/CHEBI_73925
T85 76-78 Chemical denotes RD http://purl.obolibrary.org/obo/CHEBI_73812
T86 139-141 Chemical denotes DR http://purl.obolibrary.org/obo/CHEBI_73445
T87 159-162 Chemical denotes PD1 http://purl.obolibrary.org/obo/CHEBI_138655
T88 275-278 Chemical denotes FAS http://purl.obolibrary.org/obo/CHEBI_76181

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T109 0-280 Sentence denotes A major region of this tSNE map present in COVID-19 patients, but not HD or RD, were CD8 T cells that enriched for expression of CD38, HLA-DR, KI67, CD39, and PD1 (Fig. 2G), highlighting the co-expression of these activation markers with other features including CD95 (i.e., FAS).