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PMC:7388103 / 4628-5462 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T33 243-251 Body_part denotes platelet http://purl.org/sig/ont/fma/fma62851
T34 267-275 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T35 568-572 Body_part denotes vein http://purl.org/sig/ont/fma/fma50723

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T8 563-572 Body_part denotes deep vein http://purl.obolibrary.org/obo/UBERON_0035552
T9 568-572 Body_part denotes vein http://purl.obolibrary.org/obo/UBERON_0001638

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T55 77-112 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T56 83-112 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T57 126-134 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T58 135-144 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T59 150-166 Disease denotes thrombocytopenia http://purl.obolibrary.org/obo/MONDO_0002049
T60 220-223 Disease denotes HIT http://purl.obolibrary.org/obo/MONDO_0018048
T61 341-343 Disease denotes OD http://purl.obolibrary.org/obo/MONDO_0017178
T62 520-523 Disease denotes HIT http://purl.obolibrary.org/obo/MONDO_0018048
T63 573-583 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T64 608-626 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T65 674-684 Disease denotes Thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T66 714-758 Disease denotes disseminated intravascular coagulation (DIC) http://purl.obolibrary.org/obo/MONDO_0001243

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T56 62-63 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 232-233 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T58 551-552 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 568-572 http://purl.obolibrary.org/obo/UBERON_0001638 denotes vein
T60 568-572 http://www.ebi.ac.uk/efo/EFO_0000816 denotes vein

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T22 301-311 Chemical denotes argatroban http://purl.obolibrary.org/obo/CHEBI_48720
T23 754-757 Chemical denotes DIC http://purl.obolibrary.org/obo/CHEBI_4305|http://purl.obolibrary.org/obo/CHEBI_53092

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T9 741-752 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T45 0-224 Sentence denotes We encountered 4 additional patients admitted to our ICU with a diagnosis of acute respiratory distress syndrome secondary to COVID-19 infection with thrombocytopenia, and an intermediate to high pretest probability for HIT.
T46 225-372 Sentence denotes Due to a positive platelet factor 4 (PF4) antibody, they were started on an argatroban, pending send out results of OD levels and functional assay.
T47 373-403 Sentence denotes However, the SRA was negative.
T48 404-524 Sentence denotes Interestingly, their clinical characteristics (reported in Table 1) were similar to those of our patients with true HIT.
T49 525-627 Sentence denotes Two of these patients had a confirmed deep vein thrombosis, and one with suspected pulmonary embolism.
T50 628-759 Sentence denotes Also, 2 patients met International Society on Thrombosis and Haemostasis criteria for disseminated intravascular coagulation (DIC).
T51 760-834 Sentence denotes All the patients were in hypotensive shock, requiring vasopressor support.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T34 83-103 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T35 150-166 Phenotype denotes thrombocytopenia http://purl.obolibrary.org/obo/HP_0001873
T36 220-223 Phenotype denotes HIT http://purl.obolibrary.org/obo/HP_0011874
T37 520-523 Phenotype denotes HIT http://purl.obolibrary.org/obo/HP_0011874
T38 563-583 Phenotype denotes deep vein thrombosis http://purl.obolibrary.org/obo/HP_0002625
T39 608-626 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T40 714-752 Phenotype denotes disseminated intravascular coagulation http://purl.obolibrary.org/obo/HP_0005521
T41 754-757 Phenotype denotes DIC http://purl.obolibrary.org/obo/HP_0005521
T42 797-802 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
190 262-265 Gene denotes PF4 Gene:5196
191 28-36 Species denotes patients Tax:9606
192 501-509 Species denotes patients Tax:9606
193 538-546 Species denotes patients Tax:9606
194 636-644 Species denotes patients Tax:9606
195 768-776 Species denotes patients Tax:9606
196 301-311 Chemical denotes argatroban MESH:C031942
197 386-389 Chemical denotes SRA
198 77-112 Disease denotes acute respiratory distress syndrome MESH:D012128
199 126-134 Disease denotes COVID-19 MESH:C000657245
200 135-144 Disease denotes infection MESH:D007239
201 150-166 Disease denotes thrombocytopenia MESH:D013921
202 220-223 Disease denotes HIT MESH:D013921
203 520-523 Disease denotes HIT MESH:D013921
204 563-583 Disease denotes deep vein thrombosis MESH:D020246
205 608-626 Disease denotes pulmonary embolism MESH:D011655
206 674-684 Disease denotes Thrombosis MESH:D013927
207 714-752 Disease denotes disseminated intravascular coagulation MESH:D004211
208 754-757 Disease denotes DIC MESH:D004211
209 785-802 Disease denotes hypotensive shock MESH:D007022