PMC:7377212 / 2704-3935
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T50 | 144-296 | NCBITaxon:11118 | denotes | course of COVID-19 shows many features that are shared with severe influenza infection. These include ARDS, lymphopenia, bilateral pulmonary infiltrates |
T75354 | 21-30 | UBERON:0002048 | denotes | pulmonary |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T5 | 324-332 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T6 | 374-379 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T7 | 374-379 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
99 | 21-44 | Disease | denotes | pulmonary aspergillosis | MESH:D055732 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T51 | 0-9 | Disease | denotes | Influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T52 | 31-44 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
T53 | 109-118 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T54 | 154-162 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T55 | 211-230 | Disease | denotes | influenza infection | http://purl.obolibrary.org/obo/MONDO_0005812 |
T56 | 221-230 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T57 | 246-250 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
T58 | 252-263 | Disease | denotes | lymphopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
T59 | 365-387 | Disease | denotes | multiple organ failure | http://purl.obolibrary.org/obo/MONDO_0043726 |
T60 | 462-470 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T61 | 503-525 | Disease | denotes | invasive aspergillosis | http://purl.obolibrary.org/obo/MONDO_0000240 |
T62 | 512-525 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
T63 | 627-635 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T64 | 698-702 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T65 | 714-736 | Disease | denotes | invasive aspergillosis | http://purl.obolibrary.org/obo/MONDO_0000240 |
T66 | 723-736 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
T67 | 834-842 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T68 | 889-893 | Disease | denotes | CAPA | http://purl.obolibrary.org/obo/MONDO_0007163 |
T69 | 1064-1072 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T70 | 1169-1173 | Disease | denotes | CAPA | http://purl.obolibrary.org/obo/MONDO_0007163 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22 | 61-62 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T23 | 374-379 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
T24 | 786-789 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T25 | 977-978 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T26 | 1091-1092 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T3 | 743-757 | Chemical | denotes | corticosteroid | http://purl.obolibrary.org/obo/CHEBI_50858 |
T4 | 1022-1035 | Chemical | denotes | dexamethasone | http://purl.obolibrary.org/obo/CHEBI_41879 |
MyTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32703771-22895826-29390903 | 120-122 | 22895826 | denotes | 12 |
32703771-30076119-29390903 | 120-122 | 30076119 | denotes | 12 |
32703771-28387526-29390903 | 120-122 | 28387526 | denotes | 12 |
32703771-28387526-29390904 | 389-391 | 28387526 | denotes | 14 |
32703771-27704024-29390905 | 393-395 | 27704024 | denotes | 15 |
32703771-12890854-29390906 | 763-764 | 12890854 | denotes | 5 |
32703771-32171076-29390907 | 844-845 | 32171076 | denotes | 1 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17 | 0-231 | Sentence | denotes | Influenza-associated pulmonary aspergillosis (IAPA) presents a known risk to critically unwell patients with influenza [12–14] and the clinical course of COVID-19 shows many features that are shared with severe influenza infection. |
T18 | 232-397 | Sentence | denotes | These include ARDS, lymphopenia, bilateral pulmonary infiltrates, systemic pro-inflammatory cytokine responses and sepsis leading to multiple organ failure [14, 15]. |
T19 | 398-526 | Sentence | denotes | It is therefore reasonable to suspect that patients with severe COVID-19 may be similarly susceptible to invasive aspergillosis. |
T20 | 527-766 | Sentence | denotes | Corticosteroid use is an important acquired immunological risk factor for IAPA [16] and, during the SARS-CoV 2003 epidemic, there were case reports of patients developing SARS-associated invasive aspergillosis after corticosteroid use [5]. |
T21 | 767-894 | Sentence | denotes | Corticosteroid use has been reported in hospitalised patients with COVID-19 [1] and may further contribute to the risk of CAPA. |
T22 | 895-1231 | Sentence | denotes | Importantly, the recent finding by the UK RECOVERY trial (ISRCTN50189673) [17] of a one-third mortality reduction conferred by dexamethasone in ventilated patients with COVID-19, while leading to a crucial new therapeutic avenue, may increase the risk of patients acquiring CAPA and emphasises the need for enhanced fungal surveillance. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T5 | 252-263 | Phenotype | denotes | lymphopenia | http://purl.obolibrary.org/obo/HP_0001888 |
T6 | 275-296 | Phenotype | denotes | pulmonary infiltrates | http://purl.obolibrary.org/obo/HP_0002113 |
T7 | 347-353 | Phenotype | denotes | sepsis | http://purl.obolibrary.org/obo/HP_0100806 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32703771-22895826-29390903 | 120-122 | 22895826 | denotes | 12 |
32703771-30076119-29390903 | 120-122 | 30076119 | denotes | 12 |
32703771-28387526-29390903 | 120-122 | 28387526 | denotes | 12 |
32703771-28387526-29390904 | 389-391 | 28387526 | denotes | 14 |
32703771-27704024-29390905 | 393-395 | 27704024 | denotes | 15 |
32703771-12890854-29390906 | 763-764 | 12890854 | denotes | 5 |
32703771-32171076-29390907 | 844-845 | 32171076 | denotes | 1 |