
PMC:7376845 / 16389-17077
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7376845","sourcedb":"PMC","sourceid":"7376845","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7376845","text":"Figure 1 Multiple sequence alignment for the S2 subunit fragment of SARS-CoV-1 spike glycoprotein with other relevant coronaviruses\nMERS: Middle East respiratory syndrome; SARS: severe acute respiratory coronavirus 1; SARS-CoV-2: severe acute respiratory coronavirus 2.\nThe name of the viruses, for which sequences are being compared figure on the left side of the alignment, together with the respective sequences’ GenBank accession numbers.\nColour schemes represent the following categories of amino acids: blue – hydrophobic, cyan – aromatic, green – polar, magenta – negative charge, orange – glycines, pink – cysteines, red – positive charge, yellow – prolines, white – unconserved.","divisions":[{"label":"label","span":{"begin":0,"end":8}},{"label":"caption","span":{"begin":10,"end":132}},{"label":"p","span":{"begin":10,"end":132}},{"label":"p","span":{"begin":133,"end":270}},{"label":"p","span":{"begin":271,"end":443}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T98","span":{"begin":86,"end":98},"obj":"Body_part"},{"id":"T99","span":{"begin":497,"end":508},"obj":"Body_part"},{"id":"T100","span":{"begin":598,"end":606},"obj":"Body_part"},{"id":"T101","span":{"begin":615,"end":624},"obj":"Body_part"},{"id":"T102","span":{"begin":658,"end":666},"obj":"Body_part"}],"attributes":[{"id":"A98","pred":"fma_id","subj":"T98","obj":"http://purl.org/sig/ont/fma/fma62925"},{"id":"A99","pred":"fma_id","subj":"T99","obj":"http://purl.org/sig/ont/fma/fma82739"},{"id":"A100","pred":"fma_id","subj":"T100","obj":"http://purl.org/sig/ont/fma/fma82753"},{"id":"A101","pred":"fma_id","subj":"T101","obj":"http://purl.org/sig/ont/fma/fma82751"},{"id":"A102","pred":"fma_id","subj":"T102","obj":"http://purl.org/sig/ont/fma/fma82761"},{"subj":"T98","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T99","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T100","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T101","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T102","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"393","span":{"begin":69,"end":77},"obj":"Species"},{"id":"399","span":{"begin":204,"end":215},"obj":"Species"},{"id":"400","span":{"begin":219,"end":229},"obj":"Species"},{"id":"401","span":{"begin":256,"end":269},"obj":"Species"},{"id":"402","span":{"begin":133,"end":137},"obj":"Disease"},{"id":"403","span":{"begin":139,"end":171},"obj":"Disease"},{"id":"406","span":{"begin":598,"end":606},"obj":"Chemical"},{"id":"407","span":{"begin":615,"end":624},"obj":"Chemical"}],"attributes":[{"id":"A393","pred":"tao:has_database_id","subj":"393","obj":"Tax:694009"},{"id":"A399","pred":"tao:has_database_id","subj":"399","obj":"Tax:11118"},{"id":"A400","pred":"tao:has_database_id","subj":"400","obj":"Tax:2697049"},{"id":"A401","pred":"tao:has_database_id","subj":"401","obj":"Tax:2697049"},{"id":"A402","pred":"tao:has_database_id","subj":"402","obj":"MESH:D018352"},{"id":"A403","pred":"tao:has_database_id","subj":"403","obj":"MESH:D018352"},{"id":"A406","pred":"tao:has_database_id","subj":"406","obj":"MESH:D005998"},{"id":"A407","pred":"tao:has_database_id","subj":"407","obj":"MESH:D003545"},{"subj":"393","pred":"source","obj":"LitCovid-PubTator"},{"subj":"399","pred":"source","obj":"LitCovid-PubTator"},{"subj":"400","pred":"source","obj":"LitCovid-PubTator"},{"subj":"401","pred":"source","obj":"LitCovid-PubTator"},{"subj":"402","pred":"source","obj":"LitCovid-PubTator"},{"subj":"403","pred":"source","obj":"LitCovid-PubTator"},{"subj":"406","pred":"source","obj":"LitCovid-PubTator"},{"subj":"407","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T146","span":{"begin":69,"end":77},"obj":"Disease"},{"id":"T147","span":{"begin":69,"end":73},"obj":"Disease"},{"id":"T148","span":{"begin":173,"end":177},"obj":"Disease"},{"id":"T149","span":{"begin":219,"end":227},"obj":"Disease"},{"id":"T150","span":{"begin":219,"end":223},"obj":"Disease"}],"attributes":[{"id":"A146","pred":"mondo_id","subj":"T146","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A147","pred":"mondo_id","subj":"T147","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A148","pred":"mondo_id","subj":"T148","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A149","pred":"mondo_id","subj":"T149","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A150","pred":"mondo_id","subj":"T150","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T146","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T147","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T148","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T149","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T150","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T177","span":{"begin":46,"end":48},"obj":"http://purl.obolibrary.org/obo/CLO_0008922"},{"id":"T178","span":{"begin":46,"end":48},"obj":"http://purl.obolibrary.org/obo/CLO_0050052"},{"id":"T179","span":{"begin":287,"end":294},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"}],"attributes":[{"subj":"T177","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T178","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T179","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T144","span":{"begin":46,"end":48},"obj":"Chemical"},{"id":"T145","span":{"begin":86,"end":98},"obj":"Chemical"},{"id":"T146","span":{"begin":497,"end":508},"obj":"Chemical"},{"id":"T147","span":{"begin":497,"end":502},"obj":"Chemical"},{"id":"T148","span":{"begin":503,"end":508},"obj":"Chemical"},{"id":"T149","span":{"begin":562,"end":569},"obj":"Chemical"}],"attributes":[{"id":"A144","pred":"chebi_id","subj":"T144","obj":"http://purl.obolibrary.org/obo/CHEBI_29387"},{"id":"A145","pred":"chebi_id","subj":"T145","obj":"http://purl.obolibrary.org/obo/CHEBI_17089"},{"id":"A146","pred":"chebi_id","subj":"T146","obj":"http://purl.obolibrary.org/obo/CHEBI_33709"},{"id":"A147","pred":"chebi_id","subj":"T147","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A148","pred":"chebi_id","subj":"T148","obj":"http://purl.obolibrary.org/obo/CHEBI_37527"},{"id":"A149","pred":"chebi_id","subj":"T149","obj":"http://purl.obolibrary.org/obo/CHEBI_87661"},{"subj":"T144","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T145","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T146","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T147","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T148","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T149","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T114","span":{"begin":0,"end":132},"obj":"Sentence"},{"id":"T115","span":{"begin":133,"end":138},"obj":"Sentence"},{"id":"T116","span":{"begin":139,"end":270},"obj":"Sentence"},{"id":"T117","span":{"begin":271,"end":443},"obj":"Sentence"},{"id":"T118","span":{"begin":444,"end":688},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T114","pred":"source","obj":"LitCovid-sentences"},{"subj":"T115","pred":"source","obj":"LitCovid-sentences"},{"subj":"T116","pred":"source","obj":"LitCovid-sentences"},{"subj":"T117","pred":"source","obj":"LitCovid-sentences"},{"subj":"T118","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93d2ec","default":true},{"id":"LitCovid-PubTator","color":"#ecec93"},{"id":"LitCovid-PD-MONDO","color":"#d293ec"},{"id":"LitCovid-PD-CLO","color":"#93ecb8"},{"id":"LitCovid-PD-CHEBI","color":"#ec9e93"},{"id":"LitCovid-sentences","color":"#93a1ec"}]}]}}