PMC:7373848 / 26274-27118 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7373848","sourcedb":"PMC","sourceid":"7373848","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7373848","text":"A lymphocytic vasculitis presenting with skin lesions on the toes, feet, heals and hands occurs in COVID-19. Most cases have been in children and adolescents, but not solely [56, 73]. Histopathology of biopsy-derived material show dermatitis and vascular degeneration of the basal epidermal layer. Endotheliitis within lymphocytic infiltration of the dermal vesicles and arterioles, and microthrombosis of papillary dermal capillaries are common findings. Immunohistochemistry reveals an inflammatory infiltrate predominately comprised of mature T cells with a predominance of helper t lymphocytes. Cytoplasmic granular positivity for SARS–CoV-2 spike protein is present in endothelial cells of the capillary and post-capillary vesicles and in epithelial cells of eccrine units. Coronavirus-like particles are detectable on electron microscopy.","tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T461","span":{"begin":2,"end":13},"obj":"Body_part"},{"id":"T462","span":{"begin":41,"end":45},"obj":"Body_part"},{"id":"T463","span":{"begin":61,"end":65},"obj":"Body_part"},{"id":"T464","span":{"begin":319,"end":330},"obj":"Body_part"},{"id":"T465","span":{"begin":371,"end":381},"obj":"Body_part"},{"id":"T466","span":{"begin":423,"end":434},"obj":"Body_part"},{"id":"T467","span":{"begin":548,"end":553},"obj":"Body_part"},{"id":"T468","span":{"begin":577,"end":597},"obj":"Body_part"},{"id":"T469","span":{"begin":599,"end":610},"obj":"Body_part"},{"id":"T470","span":{"begin":652,"end":659},"obj":"Body_part"},{"id":"T471","span":{"begin":674,"end":691},"obj":"Body_part"},{"id":"T472","span":{"begin":686,"end":691},"obj":"Body_part"},{"id":"T473","span":{"begin":699,"end":708},"obj":"Body_part"},{"id":"T474","span":{"begin":718,"end":727},"obj":"Body_part"},{"id":"T475","span":{"begin":744,"end":760},"obj":"Body_part"},{"id":"T476","span":{"begin":755,"end":760},"obj":"Body_part"}],"attributes":[{"id":"A461","pred":"fma_id","subj":"T461","obj":"http://purl.org/sig/ont/fma/fma62863"},{"id":"A462","pred":"fma_id","subj":"T462","obj":"http://purl.org/sig/ont/fma/fma7163"},{"id":"A463","pred":"fma_id","subj":"T463","obj":"http://purl.org/sig/ont/fma/fma70664"},{"id":"A464","pred":"fma_id","subj":"T464","obj":"http://purl.org/sig/ont/fma/fma62863"},{"id":"A465","pred":"fma_id","subj":"T465","obj":"http://purl.org/sig/ont/fma/fma63182"},{"id":"A466","pred":"fma_id","subj":"T466","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A467","pred":"fma_id","subj":"T467","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A468","pred":"fma_id","subj":"T468","obj":"http://purl.org/sig/ont/fma/fma70572"},{"id":"A469","pred":"fma_id","subj":"T469","obj":"http://purl.org/sig/ont/fma/fma66835"},{"id":"A470","pred":"fma_id","subj":"T470","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A471","pred":"fma_id","subj":"T471","obj":"http://purl.org/sig/ont/fma/fma66772"},{"id":"A472","pred":"fma_id","subj":"T472","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A473","pred":"fma_id","subj":"T473","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A474","pred":"fma_id","subj":"T474","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A475","pred":"fma_id","subj":"T475","obj":"http://purl.org/sig/ont/fma/fma66768"},{"id":"A476","pred":"fma_id","subj":"T476","obj":"http://purl.org/sig/ont/fma/fma68646"},{"subj":"T461","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T462","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T463","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T464","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T465","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T466","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T467","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T468","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T469","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T470","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T471","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T472","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T473","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T474","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T475","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T476","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T124","span":{"begin":41,"end":45},"obj":"Body_part"},{"id":"T125","span":{"begin":67,"end":71},"obj":"Body_part"},{"id":"T126","span":{"begin":83,"end":88},"obj":"Body_part"},{"id":"T127","span":{"begin":371,"end":381},"obj":"Body_part"},{"id":"T128","span":{"begin":699,"end":708},"obj":"Body_part"},{"id":"T129","span":{"begin":718,"end":727},"obj":"Body_part"}],"attributes":[{"id":"A124","pred":"uberon_id","subj":"T124","obj":"http://purl.obolibrary.org/obo/UBERON_0000014"},{"id":"A125","pred":"uberon_id","subj":"T125","obj":"http://purl.obolibrary.org/obo/UBERON_0002387"},{"id":"A126","pred":"uberon_id","subj":"T126","obj":"http://purl.obolibrary.org/obo/UBERON_0002398"},{"id":"A127","pred":"uberon_id","subj":"T127","obj":"http://purl.obolibrary.org/obo/UBERON_0001980"},{"id":"A128","pred":"uberon_id","subj":"T128","obj":"http://purl.obolibrary.org/obo/UBERON_0001982"},{"id":"A129","pred":"uberon_id","subj":"T129","obj":"http://purl.obolibrary.org/obo/UBERON_0001982"},{"subj":"T124","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T125","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T126","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T127","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T128","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T129","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"481","span":{"begin":646,"end":651},"obj":"Gene"},{"id":"482","span":{"begin":133,"end":141},"obj":"Species"},{"id":"483","span":{"begin":635,"end":645},"obj":"Species"},{"id":"484","span":{"begin":779,"end":790},"obj":"Species"},{"id":"485","span":{"begin":2,"end":24},"obj":"Disease"},{"id":"486","span":{"begin":41,"end":53},"obj":"Disease"},{"id":"487","span":{"begin":99,"end":107},"obj":"Disease"},{"id":"488","span":{"begin":231,"end":241},"obj":"Disease"},{"id":"489","span":{"begin":246,"end":267},"obj":"Disease"},{"id":"490","span":{"begin":298,"end":330},"obj":"Disease"},{"id":"491","span":{"begin":387,"end":434},"obj":"Disease"}],"attributes":[{"id":"A481","pred":"tao:has_database_id","subj":"481","obj":"Gene:43740568"},{"id":"A482","pred":"tao:has_database_id","subj":"482","obj":"Tax:9606"},{"id":"A483","pred":"tao:has_database_id","subj":"483","obj":"Tax:2697049"},{"id":"A484","pred":"tao:has_database_id","subj":"484","obj":"Tax:11118"},{"id":"A485","pred":"tao:has_database_id","subj":"485","obj":"MESH:C566008"},{"id":"A486","pred":"tao:has_database_id","subj":"486","obj":"MESH:D012871"},{"id":"A487","pred":"tao:has_database_id","subj":"487","obj":"MESH:C000657245"},{"id":"A488","pred":"tao:has_database_id","subj":"488","obj":"MESH:D003872"},{"id":"A489","pred":"tao:has_database_id","subj":"489","obj":"MESH:D000783"},{"id":"A490","pred":"tao:has_database_id","subj":"490","obj":"MESH:D001929"},{"id":"A491","pred":"tao:has_database_id","subj":"491","obj":"MESH:D016136"},{"subj":"481","pred":"source","obj":"LitCovid-PubTator"},{"subj":"482","pred":"source","obj":"LitCovid-PubTator"},{"subj":"483","pred":"source","obj":"LitCovid-PubTator"},{"subj":"484","pred":"source","obj":"LitCovid-PubTator"},{"subj":"485","pred":"source","obj":"LitCovid-PubTator"},{"subj":"486","pred":"source","obj":"LitCovid-PubTator"},{"subj":"487","pred":"source","obj":"LitCovid-PubTator"},{"subj":"488","pred":"source","obj":"LitCovid-PubTator"},{"subj":"489","pred":"source","obj":"LitCovid-PubTator"},{"subj":"490","pred":"source","obj":"LitCovid-PubTator"},{"subj":"491","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T120","span":{"begin":2,"end":24},"obj":"Disease"},{"id":"T121","span":{"begin":14,"end":24},"obj":"Disease"},{"id":"T122","span":{"begin":99,"end":107},"obj":"Disease"},{"id":"T123","span":{"begin":231,"end":241},"obj":"Disease"},{"id":"T124","span":{"begin":298,"end":311},"obj":"Disease"},{"id":"T125","span":{"begin":635,"end":639},"obj":"Disease"}],"attributes":[{"id":"A120","pred":"mondo_id","subj":"T120","obj":"http://purl.obolibrary.org/obo/MONDO_0008640"},{"id":"A121","pred":"mondo_id","subj":"T121","obj":"http://purl.obolibrary.org/obo/MONDO_0018882"},{"id":"A122","pred":"mondo_id","subj":"T122","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A123","pred":"mondo_id","subj":"T123","obj":"http://purl.obolibrary.org/obo/MONDO_0002406"},{"id":"A124","pred":"mondo_id","subj":"T124","obj":"http://purl.obolibrary.org/obo/MONDO_0015292"},{"id":"A125","pred":"mondo_id","subj":"T125","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T120","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T121","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T122","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T123","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T124","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T125","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T455","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T456","span":{"begin":41,"end":45},"obj":"http://purl.obolibrary.org/obo/UBERON_0000014"},{"id":"T457","span":{"begin":41,"end":45},"obj":"http://purl.obolibrary.org/obo/UBERON_0001003"},{"id":"T458","span":{"begin":41,"end":45},"obj":"http://purl.obolibrary.org/obo/UBERON_0002097"},{"id":"T459","span":{"begin":41,"end":45},"obj":"http://purl.obolibrary.org/obo/UBERON_0002199"},{"id":"T460","span":{"begin":41,"end":45},"obj":"http://www.ebi.ac.uk/efo/EFO_0000962"},{"id":"T461","span":{"begin":539,"end":553},"obj":"http://purl.obolibrary.org/obo/CL_0002419"},{"id":"T462","span":{"begin":559,"end":560},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T463","span":{"begin":577,"end":597},"obj":"http://purl.obolibrary.org/obo/CL_0000912"},{"id":"T464","span":{"begin":674,"end":691},"obj":"http://purl.obolibrary.org/obo/CL_0000115"},{"id":"T465","span":{"begin":744,"end":754},"obj":"http://purl.obolibrary.org/obo/CL_0000066"},{"id":"T466","span":{"begin":755,"end":760},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"attributes":[{"subj":"T455","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T456","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T457","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T458","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T459","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T460","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T461","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T462","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T463","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T464","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T465","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T466","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T184","span":{"begin":652,"end":659},"obj":"Chemical"},{"id":"T185","span":{"begin":824,"end":832},"obj":"Chemical"}],"attributes":[{"id":"A184","pred":"chebi_id","subj":"T184","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A185","pred":"chebi_id","subj":"T185","obj":"http://purl.obolibrary.org/obo/CHEBI_10545"},{"subj":"T184","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T185","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-HP","denotations":[{"id":"T48","span":{"begin":14,"end":24},"obj":"Phenotype"},{"id":"T49","span":{"begin":231,"end":241},"obj":"Phenotype"}],"attributes":[{"id":"A48","pred":"hp_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/HP_0002633"},{"id":"A49","pred":"hp_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/HP_0011123"},{"subj":"T48","pred":"source","obj":"LitCovid-PD-HP"},{"subj":"T49","pred":"source","obj":"LitCovid-PD-HP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T231","span":{"begin":0,"end":108},"obj":"Sentence"},{"id":"T232","span":{"begin":109,"end":183},"obj":"Sentence"},{"id":"T233","span":{"begin":184,"end":297},"obj":"Sentence"},{"id":"T234","span":{"begin":298,"end":455},"obj":"Sentence"},{"id":"T235","span":{"begin":456,"end":598},"obj":"Sentence"},{"id":"T236","span":{"begin":599,"end":778},"obj":"Sentence"},{"id":"T237","span":{"begin":779,"end":844},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T231","pred":"source","obj":"LitCovid-sentences"},{"subj":"T232","pred":"source","obj":"LitCovid-sentences"},{"subj":"T233","pred":"source","obj":"LitCovid-sentences"},{"subj":"T234","pred":"source","obj":"LitCovid-sentences"},{"subj":"T235","pred":"source","obj":"LitCovid-sentences"},{"subj":"T236","pred":"source","obj":"LitCovid-sentences"},{"subj":"T237","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T844","span":{"begin":2,"end":13},"obj":"CL:0000542"},{"id":"T845","span":{"begin":61,"end":65},"obj":"UBERON:0002544"},{"id":"T846","span":{"begin":67,"end":71},"obj":"UBERON:0002387"},{"id":"T847","span":{"begin":83,"end":88},"obj":"UBERON:0002398"},{"id":"T848","span":{"begin":99,"end":107},"obj":"SP_7"},{"id":"T849","span":{"begin":275,"end":296},"obj":"UBERON:0002025"},{"id":"T850","span":{"begin":319,"end":330},"obj":"CL:0000542"},{"id":"T851","span":{"begin":358,"end":366},"obj":"GO:0031982"},{"id":"T852","span":{"begin":371,"end":381},"obj":"UBERON:0001980"},{"id":"T853","span":{"begin":387,"end":402},"obj":"GO:0007596"},{"id":"T854","span":{"begin":406,"end":422},"obj":"UBERON:0000412"},{"id":"T855","span":{"begin":423,"end":434},"obj":"UBERON:0001982"},{"id":"T856","span":{"begin":546,"end":553},"obj":"CL:0002419"},{"id":"T857","span":{"begin":577,"end":597},"obj":"CL:0000912"},{"id":"T858","span":{"begin":599,"end":610},"obj":"GO:0005737"},{"id":"T859","span":{"begin":635,"end":645},"obj":"SP_7"},{"id":"T860","span":{"begin":674,"end":685},"obj":"UBERON:0001986;CL:0000115"},{"id":"T861","span":{"begin":686,"end":691},"obj":"CL:0000115"},{"id":"T862","span":{"begin":699,"end":708},"obj":"UBERON:0001982"},{"id":"T863","span":{"begin":718,"end":736},"obj":"UBERON:0001982"},{"id":"T864","span":{"begin":744,"end":754},"obj":"UBERON:0000483;CL:0000066"},{"id":"T865","span":{"begin":755,"end":760},"obj":"CL:0000066"},{"id":"T866","span":{"begin":764,"end":771},"obj":"UBERON:0000483"},{"id":"T867","span":{"begin":779,"end":790},"obj":"NCBITaxon:11118"},{"id":"T868","span":{"begin":824,"end":832},"obj":"CHEBI:10545;CHEBI:10545"}],"attributes":[{"subj":"T844","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T845","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T846","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T847","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T848","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T849","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T850","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T851","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T852","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T853","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T854","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T855","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T856","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T857","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T858","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T859","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T860","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T861","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T862","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T863","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T864","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T865","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T866","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T867","pred":"source","obj":"LitCovid-PMC-OGER-BB"},{"subj":"T868","pred":"source","obj":"LitCovid-PMC-OGER-BB"}]},{"project":"2_test","denotations":[{"id":"32700024-32562567-64991494","span":{"begin":175,"end":177},"obj":"32562567"},{"id":"32700024-32396999-64991495","span":{"begin":179,"end":181},"obj":"32396999"}],"attributes":[{"subj":"32700024-32562567-64991494","pred":"source","obj":"2_test"},{"subj":"32700024-32396999-64991495","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#b4ec93","default":true},{"id":"LitCovid-PD-UBERON","color":"#ec93cf"},{"id":"LitCovid-PubTator","color":"#93e9ec"},{"id":"LitCovid-PD-MONDO","color":"#ecd593"},{"id":"LitCovid-PD-CLO","color":"#bb93ec"},{"id":"LitCovid-PD-CHEBI","color":"#93eca1"},{"id":"LitCovid-PD-HP","color":"#ec939e"},{"id":"LitCovid-sentences","color":"#93b8ec"},{"id":"LitCovid-PMC-OGER-BB","color":"#d2ec93"},{"id":"2_test","color":"#eb93ec"}]}]}}