PMC:7373848 / 26274-27118
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T461 | 2-13 | Body_part | denotes | lymphocytic | http://purl.org/sig/ont/fma/fma62863 |
T462 | 41-45 | Body_part | denotes | skin | http://purl.org/sig/ont/fma/fma7163 |
T463 | 61-65 | Body_part | denotes | toes | http://purl.org/sig/ont/fma/fma70664 |
T464 | 319-330 | Body_part | denotes | lymphocytic | http://purl.org/sig/ont/fma/fma62863 |
T465 | 371-381 | Body_part | denotes | arterioles | http://purl.org/sig/ont/fma/fma63182 |
T466 | 423-434 | Body_part | denotes | capillaries | http://purl.org/sig/ont/fma/fma63194 |
T467 | 548-553 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T468 | 577-597 | Body_part | denotes | helper t lymphocytes | http://purl.org/sig/ont/fma/fma70572 |
T469 | 599-610 | Body_part | denotes | Cytoplasmic | http://purl.org/sig/ont/fma/fma66835 |
T470 | 652-659 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T471 | 674-691 | Body_part | denotes | endothelial cells | http://purl.org/sig/ont/fma/fma66772 |
T472 | 686-691 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T473 | 699-708 | Body_part | denotes | capillary | http://purl.org/sig/ont/fma/fma63194 |
T474 | 718-727 | Body_part | denotes | capillary | http://purl.org/sig/ont/fma/fma63194 |
T475 | 744-760 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
T476 | 755-760 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T124 | 41-45 | Body_part | denotes | skin | http://purl.obolibrary.org/obo/UBERON_0000014 |
T125 | 67-71 | Body_part | denotes | feet | http://purl.obolibrary.org/obo/UBERON_0002387 |
T126 | 83-88 | Body_part | denotes | hands | http://purl.obolibrary.org/obo/UBERON_0002398 |
T127 | 371-381 | Body_part | denotes | arterioles | http://purl.obolibrary.org/obo/UBERON_0001980 |
T128 | 699-708 | Body_part | denotes | capillary | http://purl.obolibrary.org/obo/UBERON_0001982 |
T129 | 718-727 | Body_part | denotes | capillary | http://purl.obolibrary.org/obo/UBERON_0001982 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
481 | 646-651 | Gene | denotes | spike | Gene:43740568 |
482 | 133-141 | Species | denotes | children | Tax:9606 |
483 | 635-645 | Species | denotes | SARS–CoV-2 | Tax:2697049 |
484 | 779-790 | Species | denotes | Coronavirus | Tax:11118 |
485 | 2-24 | Disease | denotes | lymphocytic vasculitis | MESH:C566008 |
486 | 41-53 | Disease | denotes | skin lesions | MESH:D012871 |
487 | 99-107 | Disease | denotes | COVID-19 | MESH:C000657245 |
488 | 231-241 | Disease | denotes | dermatitis | MESH:D003872 |
489 | 246-267 | Disease | denotes | vascular degeneration | MESH:D000783 |
490 | 298-330 | Disease | denotes | Endotheliitis within lymphocytic | MESH:D001929 |
491 | 387-434 | Disease | denotes | microthrombosis of papillary dermal capillaries | MESH:D016136 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T120 | 2-24 | Disease | denotes | lymphocytic vasculitis | http://purl.obolibrary.org/obo/MONDO_0008640 |
T121 | 14-24 | Disease | denotes | vasculitis | http://purl.obolibrary.org/obo/MONDO_0018882 |
T122 | 99-107 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T123 | 231-241 | Disease | denotes | dermatitis | http://purl.obolibrary.org/obo/MONDO_0002406 |
T124 | 298-311 | Disease | denotes | Endotheliitis | http://purl.obolibrary.org/obo/MONDO_0015292 |
T125 | 635-639 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T455 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T456 | 41-45 | http://purl.obolibrary.org/obo/UBERON_0000014 | denotes | skin |
T457 | 41-45 | http://purl.obolibrary.org/obo/UBERON_0001003 | denotes | skin |
T458 | 41-45 | http://purl.obolibrary.org/obo/UBERON_0002097 | denotes | skin |
T459 | 41-45 | http://purl.obolibrary.org/obo/UBERON_0002199 | denotes | skin |
T460 | 41-45 | http://www.ebi.ac.uk/efo/EFO_0000962 | denotes | skin |
T461 | 539-553 | http://purl.obolibrary.org/obo/CL_0002419 | denotes | mature T cells |
T462 | 559-560 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T463 | 577-597 | http://purl.obolibrary.org/obo/CL_0000912 | denotes | helper t lymphocytes |
T464 | 674-691 | http://purl.obolibrary.org/obo/CL_0000115 | denotes | endothelial cells |
T465 | 744-754 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
T466 | 755-760 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T184 | 652-659 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T185 | 824-832 | Chemical | denotes | electron | http://purl.obolibrary.org/obo/CHEBI_10545 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T48 | 14-24 | Phenotype | denotes | vasculitis | http://purl.obolibrary.org/obo/HP_0002633 |
T49 | 231-241 | Phenotype | denotes | dermatitis | http://purl.obolibrary.org/obo/HP_0011123 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T231 | 0-108 | Sentence | denotes | A lymphocytic vasculitis presenting with skin lesions on the toes, feet, heals and hands occurs in COVID-19. |
T232 | 109-183 | Sentence | denotes | Most cases have been in children and adolescents, but not solely [56, 73]. |
T233 | 184-297 | Sentence | denotes | Histopathology of biopsy-derived material show dermatitis and vascular degeneration of the basal epidermal layer. |
T234 | 298-455 | Sentence | denotes | Endotheliitis within lymphocytic infiltration of the dermal vesicles and arterioles, and microthrombosis of papillary dermal capillaries are common findings. |
T235 | 456-598 | Sentence | denotes | Immunohistochemistry reveals an inflammatory infiltrate predominately comprised of mature T cells with a predominance of helper t lymphocytes. |
T236 | 599-778 | Sentence | denotes | Cytoplasmic granular positivity for SARS–CoV-2 spike protein is present in endothelial cells of the capillary and post-capillary vesicles and in epithelial cells of eccrine units. |
T237 | 779-844 | Sentence | denotes | Coronavirus-like particles are detectable on electron microscopy. |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T844 | 2-13 | CL:0000542 | denotes | lymphocytic |
T845 | 61-65 | UBERON:0002544 | denotes | toes |
T846 | 67-71 | UBERON:0002387 | denotes | feet |
T847 | 83-88 | UBERON:0002398 | denotes | hands |
T848 | 99-107 | SP_7 | denotes | COVID-19 |
T849 | 275-296 | UBERON:0002025 | denotes | basal epidermal layer |
T850 | 319-330 | CL:0000542 | denotes | lymphocytic |
T851 | 358-366 | GO:0031982 | denotes | vesicles |
T852 | 371-381 | UBERON:0001980 | denotes | arterioles |
T853 | 387-402 | GO:0007596 | denotes | microthrombosis |
T854 | 406-422 | UBERON:0000412 | denotes | papillary dermal |
T855 | 423-434 | UBERON:0001982 | denotes | capillaries |
T856 | 546-553 | CL:0002419 | denotes | T cells |
T857 | 577-597 | CL:0000912 | denotes | helper t lymphocytes |
T858 | 599-610 | GO:0005737 | denotes | Cytoplasmic |
T859 | 635-645 | SP_7 | denotes | SARS–CoV-2 |
T860 | 674-685 | UBERON:0001986;CL:0000115 | denotes | endothelial |
T861 | 686-691 | CL:0000115 | denotes | cells |
T862 | 699-708 | UBERON:0001982 | denotes | capillary |
T863 | 718-736 | UBERON:0001982 | denotes | capillary vesicles |
T864 | 744-754 | UBERON:0000483;CL:0000066 | denotes | epithelial |
T865 | 755-760 | CL:0000066 | denotes | cells |
T866 | 764-771 | UBERON:0000483 | denotes | eccrine |
T867 | 779-790 | NCBITaxon:11118 | denotes | Coronavirus |
T868 | 824-832 | CHEBI:10545;CHEBI:10545 | denotes | electron |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32700024-32562567-64991494 | 175-177 | 32562567 | denotes | 56 |
32700024-32396999-64991495 | 179-181 | 32396999 | denotes | 73 |