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PMC:7373848 / 26274-27118 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T461 2-13 Body_part denotes lymphocytic http://purl.org/sig/ont/fma/fma62863
T462 41-45 Body_part denotes skin http://purl.org/sig/ont/fma/fma7163
T463 61-65 Body_part denotes toes http://purl.org/sig/ont/fma/fma70664
T464 319-330 Body_part denotes lymphocytic http://purl.org/sig/ont/fma/fma62863
T465 371-381 Body_part denotes arterioles http://purl.org/sig/ont/fma/fma63182
T466 423-434 Body_part denotes capillaries http://purl.org/sig/ont/fma/fma63194
T467 548-553 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T468 577-597 Body_part denotes helper t lymphocytes http://purl.org/sig/ont/fma/fma70572
T469 599-610 Body_part denotes Cytoplasmic http://purl.org/sig/ont/fma/fma66835
T470 652-659 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T471 674-691 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T472 686-691 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T473 699-708 Body_part denotes capillary http://purl.org/sig/ont/fma/fma63194
T474 718-727 Body_part denotes capillary http://purl.org/sig/ont/fma/fma63194
T475 744-760 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T476 755-760 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T124 41-45 Body_part denotes skin http://purl.obolibrary.org/obo/UBERON_0000014
T125 67-71 Body_part denotes feet http://purl.obolibrary.org/obo/UBERON_0002387
T126 83-88 Body_part denotes hands http://purl.obolibrary.org/obo/UBERON_0002398
T127 371-381 Body_part denotes arterioles http://purl.obolibrary.org/obo/UBERON_0001980
T128 699-708 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982
T129 718-727 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
481 646-651 Gene denotes spike Gene:43740568
482 133-141 Species denotes children Tax:9606
483 635-645 Species denotes SARS–CoV-2 Tax:2697049
484 779-790 Species denotes Coronavirus Tax:11118
485 2-24 Disease denotes lymphocytic vasculitis MESH:C566008
486 41-53 Disease denotes skin lesions MESH:D012871
487 99-107 Disease denotes COVID-19 MESH:C000657245
488 231-241 Disease denotes dermatitis MESH:D003872
489 246-267 Disease denotes vascular degeneration MESH:D000783
490 298-330 Disease denotes Endotheliitis within lymphocytic MESH:D001929
491 387-434 Disease denotes microthrombosis of papillary dermal capillaries MESH:D016136

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T120 2-24 Disease denotes lymphocytic vasculitis http://purl.obolibrary.org/obo/MONDO_0008640
T121 14-24 Disease denotes vasculitis http://purl.obolibrary.org/obo/MONDO_0018882
T122 99-107 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T123 231-241 Disease denotes dermatitis http://purl.obolibrary.org/obo/MONDO_0002406
T124 298-311 Disease denotes Endotheliitis http://purl.obolibrary.org/obo/MONDO_0015292
T125 635-639 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T455 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T456 41-45 http://purl.obolibrary.org/obo/UBERON_0000014 denotes skin
T457 41-45 http://purl.obolibrary.org/obo/UBERON_0001003 denotes skin
T458 41-45 http://purl.obolibrary.org/obo/UBERON_0002097 denotes skin
T459 41-45 http://purl.obolibrary.org/obo/UBERON_0002199 denotes skin
T460 41-45 http://www.ebi.ac.uk/efo/EFO_0000962 denotes skin
T461 539-553 http://purl.obolibrary.org/obo/CL_0002419 denotes mature T cells
T462 559-560 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T463 577-597 http://purl.obolibrary.org/obo/CL_0000912 denotes helper t lymphocytes
T464 674-691 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T465 744-754 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T466 755-760 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T184 652-659 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T185 824-832 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T48 14-24 Phenotype denotes vasculitis http://purl.obolibrary.org/obo/HP_0002633
T49 231-241 Phenotype denotes dermatitis http://purl.obolibrary.org/obo/HP_0011123

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T231 0-108 Sentence denotes A lymphocytic vasculitis presenting with skin lesions on the toes, feet, heals and hands occurs in COVID-19.
T232 109-183 Sentence denotes Most cases have been in children and adolescents, but not solely [56, 73].
T233 184-297 Sentence denotes Histopathology of biopsy-derived material show dermatitis and vascular degeneration of the basal epidermal layer.
T234 298-455 Sentence denotes Endotheliitis within lymphocytic infiltration of the dermal vesicles and arterioles, and microthrombosis of papillary dermal capillaries are common findings.
T235 456-598 Sentence denotes Immunohistochemistry reveals an inflammatory infiltrate predominately comprised of mature T cells with a predominance of helper t lymphocytes.
T236 599-778 Sentence denotes Cytoplasmic granular positivity for SARS–CoV-2 spike protein is present in endothelial cells of the capillary and post-capillary vesicles and in epithelial cells of eccrine units.
T237 779-844 Sentence denotes Coronavirus-like particles are detectable on electron microscopy.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T844 2-13 CL:0000542 denotes lymphocytic
T845 61-65 UBERON:0002544 denotes toes
T846 67-71 UBERON:0002387 denotes feet
T847 83-88 UBERON:0002398 denotes hands
T848 99-107 SP_7 denotes COVID-19
T849 275-296 UBERON:0002025 denotes basal epidermal layer
T850 319-330 CL:0000542 denotes lymphocytic
T851 358-366 GO:0031982 denotes vesicles
T852 371-381 UBERON:0001980 denotes arterioles
T853 387-402 GO:0007596 denotes microthrombosis
T854 406-422 UBERON:0000412 denotes papillary dermal
T855 423-434 UBERON:0001982 denotes capillaries
T856 546-553 CL:0002419 denotes T cells
T857 577-597 CL:0000912 denotes helper t lymphocytes
T858 599-610 GO:0005737 denotes Cytoplasmic
T859 635-645 SP_7 denotes SARS–CoV-2
T860 674-685 UBERON:0001986;CL:0000115 denotes endothelial
T861 686-691 CL:0000115 denotes cells
T862 699-708 UBERON:0001982 denotes capillary
T863 718-736 UBERON:0001982 denotes capillary vesicles
T864 744-754 UBERON:0000483;CL:0000066 denotes epithelial
T865 755-760 CL:0000066 denotes cells
T866 764-771 UBERON:0000483 denotes eccrine
T867 779-790 NCBITaxon:11118 denotes Coronavirus
T868 824-832 CHEBI:10545;CHEBI:10545 denotes electron

2_test

Id Subject Object Predicate Lexical cue
32700024-32562567-64991494 175-177 32562567 denotes 56
32700024-32396999-64991495 179-181 32396999 denotes 73