PMC:7371427 / 22062-22913
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T259 | 35-40 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T260 | 48-53 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T261 | 56-78 | Body_part | denotes | pancreatic alpha cells | http://purl.org/sig/ont/fma/fma70585 |
T262 | 73-78 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T263 | 84-97 | Body_part | denotes | keratinocytes | http://purl.org/sig/ont/fma/fma62879 |
T264 | 340-344 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T265 | 515-520 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T266 | 544-561 | Body_part | denotes | pancreatic islets | http://purl.org/sig/ont/fma/fma76489 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T454 | 35-40 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T455 | 48-53 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T456 | 73-78 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T457 | 84-97 | http://purl.obolibrary.org/obo/CL_0000312 | denotes | keratinocytes |
T458 | 236-237 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T459 | 340-350 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell types |
T460 | 452-456 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T461 | 515-520 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T462 | 538-543 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T463 | 544-561 | http://purl.obolibrary.org/obo/UBERON_0000006 | denotes | pancreatic islets |
T464 | 820-827 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signals |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T39 | 12-34 | Chemical | denotes | pancreatic polypeptide | http://purl.obolibrary.org/obo/CHEBI_80329 |
T40 | 23-34 | Chemical | denotes | polypeptide | http://purl.obolibrary.org/obo/CHEBI_15841 |
T41 | 42-47 | Chemical | denotes | gamma | http://purl.obolibrary.org/obo/CHEBI_30212 |
T42 | 67-72 | Chemical | denotes | alpha | http://purl.obolibrary.org/obo/CHEBI_30216 |
T43 | 500-505 | Chemical | denotes | gamma | http://purl.obolibrary.org/obo/CHEBI_30212 |
T44 | 509-514 | Chemical | denotes | alpha | http://purl.obolibrary.org/obo/CHEBI_30216 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20 | 762-771 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
T21 | 809-827 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | biological signals |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T135 | 0-202 | Sentence | denotes | Conversely, pancreatic polypeptide cells (gamma cells), pancreatic alpha cells, and keratinocytes show similarly robust ACE2 expression but have not been strongly associated with ACE2 in the literature. |
T136 | 203-285 | Sentence | denotes | This combination suggests either a biological novelty or an experimental artifact. |
T137 | 286-659 | Sentence | denotes | We note that the strong ACE2 expression in pancreatic cell types is derived from only one murine study (Figure 2—figure supplement 1; Tabula Muris Consortium et al., 2018), while ACE2 expression is not observed in gamma or alpha cells from scRNAseq of human pancreatic islets (Figure 2—figure supplement 1; Segerstolpe et al., 2016; Grün et al., 2016; Muraro et al., 2016). |
T138 | 660-851 | Sentence | denotes | While we cannot determine the validity of either observation, this example demonstrates how knowledge synthesis can automatically surface discordant biological signals for further evaluation. |
MyTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32463365-30283141-27519104 | 452-456 | 30283141 | denotes | 2018 |
32463365-27667667-27519105 | 613-617 | 27667667 | denotes | 2016 |
32463365-27345837-27519106 | 632-636 | 27345837 | denotes | 2016 |
32463365-27693023-27519107 | 653-657 | 27693023 | denotes | 2016 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32463365-30283141-27519104 | 452-456 | 30283141 | denotes | 2018 |
32463365-27667667-27519105 | 613-617 | 27667667 | denotes | 2016 |
32463365-27345837-27519106 | 632-636 | 27345837 | denotes | 2016 |
32463365-27693023-27519107 | 653-657 | 27693023 | denotes | 2016 |