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PMC:7354481 / 58906-60915 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T378 51-55 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T379 124-129 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T380 309-318 Body_part denotes Cytokines http://purl.org/sig/ont/fma/fma84050
T381 357-361 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T382 417-430 Body_part denotes Interleukin-1 http://purl.org/sig/ont/fma/fma86583
T383 417-428 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T384 445-465 Body_part denotes extracellular matrix http://purl.org/sig/ont/fma/fma9672
T385 469-482 Body_part denotes Interleukin-5 http://purl.org/sig/ont/fma/fma264830
T386 469-480 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T387 531-539 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T388 550-554 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T389 582-595 Body_part denotes Immune system http://purl.org/sig/ont/fma/fma9825
T390 622-634 Body_part denotes interleukins http://purl.org/sig/ont/fma/fma86578
T391 636-645 Body_part denotes prolactin http://purl.org/sig/ont/fma/fma83358
T392 658-666 Body_part denotes hormones http://purl.org/sig/ont/fma/fma12278
T393 812-820 Body_part denotes Cytokine http://purl.org/sig/ont/fma/fma84050
T394 821-829 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T395 975-978 Body_part denotes map http://purl.org/sig/ont/fma/fma67847
T396 1028-1033 Body_part denotes Blood http://purl.org/sig/ont/fma/fma9670
T397 1116-1130 Body_part denotes Interleukin-10 http://purl.org/sig/ont/fma/fma264825
T398 1116-1127 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T399 1153-1166 Body_part denotes Interleukin-4 http://purl.org/sig/ont/fma/fma264831
T400 1153-1164 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T401 1171-1185 Body_part denotes Interleukin-13 http://purl.org/sig/ont/fma/fma264824
T402 1171-1182 Body_part denotes Interleukin http://purl.org/sig/ont/fma/fma86578
T403 1256-1265 Body_part denotes Chemokine http://purl.org/sig/ont/fma/fma241981
T404 1281-1291 Body_part denotes chemokines http://purl.org/sig/ont/fma/fma241981
T405 1576-1587 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740
T406 1654-1665 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740
T407 1701-1712 Body_part denotes nucleotides http://purl.org/sig/ont/fma/fma82740

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T72 357-361 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T73 582-595 Body_part denotes Immune system http://purl.obolibrary.org/obo/UBERON_0002405
T74 1028-1033 Body_part denotes Blood http://purl.obolibrary.org/obo/UBERON_0000178

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T326 91-99 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T327 753-766 Disease denotes Legionellosis http://purl.obolibrary.org/obo/MONDO_0005823
T328 779-799 Disease denotes Rheumatoid arthritis http://purl.obolibrary.org/obo/MONDO_0008383
T329 790-799 Disease denotes arthritis http://purl.obolibrary.org/obo/MONDO_0005578

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T697 51-55 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T698 119-123 http://purl.obolibrary.org/obo/CLO_0001601 denotes A549
T699 119-123 http://purl.obolibrary.org/obo/CLO_0050025 denotes A549
T700 119-123 http://purl.obolibrary.org/obo/CLO_0054264 denotes A549
T701 119-123 http://purl.obolibrary.org/obo/CLO_0054265 denotes A549
T702 119-123 http://purl.obolibrary.org/obo/CLO_0054266 denotes A549
T703 119-123 http://purl.obolibrary.org/obo/CLO_0054267 denotes A549
T704 119-123 http://purl.obolibrary.org/obo/CLO_0054268 denotes A549
T705 119-123 http://purl.obolibrary.org/obo/CLO_0054269 denotes A549
T706 124-129 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T707 184-186 http://purl.obolibrary.org/obo/CLO_0007074 denotes kB
T708 184-186 http://purl.obolibrary.org/obo/CLO_0051988 denotes kB
T709 196-205 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T710 212-214 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T711 215-224 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T712 357-361 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T713 357-361 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T714 417-430 http://purl.obolibrary.org/obo/PR_000001091 denotes Interleukin-1
T715 540-554 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity, cell
T716 582-595 http://purl.obolibrary.org/obo/UBERON_0002405 denotes Immune system
T717 596-605 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T718 636-645 http://purl.obolibrary.org/obo/PR_000013246 denotes prolactin
T719 689-698 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T720 723-732 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T721 879-890 http://purl.obolibrary.org/obo/PR_000012867 denotes Plasminogen
T722 891-901 http://purl.obolibrary.org/obo/CLO_0001658 denotes activating
T723 933-942 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T724 965-974 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T725 979-981 http://purl.obolibrary.org/obo/CLO_0009141 denotes ST
T726 979-981 http://purl.obolibrary.org/obo/CLO_0050980 denotes ST
T727 1001-1010 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T728 1028-1033 http://purl.obolibrary.org/obo/UBERON_0000178 denotes Blood
T729 1028-1033 http://www.ebi.ac.uk/efo/EFO_0000296 denotes Blood
T730 1094-1103 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T731 1116-1130 http://purl.obolibrary.org/obo/PR_000001471 denotes Interleukin-10
T732 1131-1140 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T733 1186-1195 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T734 1324-1326 http://purl.obolibrary.org/obo/CLO_0002709 denotes DB
T735 1341-1351 http://purl.obolibrary.org/obo/SO_0000418 denotes Signalling
T736 1372-1374 http://purl.obolibrary.org/obo/CLO_0007074 denotes kB
T737 1372-1374 http://purl.obolibrary.org/obo/CLO_0051988 denotes kB
T738 1375-1384 http://purl.obolibrary.org/obo/SO_0000418 denotes Signaling
T739 1541-1543 http://purl.obolibrary.org/obo/CLO_0002675 denotes D3
T740 1757-1759 http://purl.obolibrary.org/obo/CLO_0002709 denotes DB
T741 1864-1873 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T742 1901-1910 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T43 181-183 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T40205 209-211 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T85801 514-519 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T49332 622-634 Chemical denotes interleukins http://purl.obolibrary.org/obo/CHEBI_52998
T78269 651-666 Chemical denotes growth hormones http://purl.obolibrary.org/obo/CHEBI_37845
T69867 658-666 Chemical denotes hormones http://purl.obolibrary.org/obo/CHEBI_24621
T9718 683-685 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T96062 979-981 Chemical denotes ST http://purl.obolibrary.org/obo/CHEBI_141393
T62064 1083-1088 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T74514 1089-1093 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T80070 1316-1323 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T81989 1352-1359 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T91246 1369-1371 Chemical denotes NF http://purl.obolibrary.org/obo/CHEBI_141424|http://purl.obolibrary.org/obo/CHEBI_25573|http://purl.obolibrary.org/obo/CHEBI_1224
T61187 1385-1392 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T98824 1421-1428 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T84779 1464-1471 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T97841 1494-1500 Chemical denotes Action http://purl.obolibrary.org/obo/CHEBI_5133
T1497 1501-1508 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T53481 1533-1543 Chemical denotes vitamin D3 http://purl.obolibrary.org/obo/CHEBI_28940
T72741 1533-1540 Chemical denotes vitamin http://purl.obolibrary.org/obo/CHEBI_33229
T61528 1566-1575 Chemical denotes guanosine http://purl.obolibrary.org/obo/CHEBI_16750
T66639 1576-1587 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T94256 1609-1618 Chemical denotes retinoate http://purl.obolibrary.org/obo/CHEBI_139589|http://purl.obolibrary.org/obo/CHEBI_15036
T23098 1632-1634 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T46810 1644-1653 Chemical denotes guanosine http://purl.obolibrary.org/obo/CHEBI_16750
T58030 1654-1665 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T44793 1691-1700 Chemical denotes adenosine http://purl.obolibrary.org/obo/CHEBI_16335
T28161 1701-1712 Chemical denotes nucleotides http://purl.obolibrary.org/obo/CHEBI_36976
T93154 1725-1727 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T96820 1737-1744 Chemical denotes Pathway http://purl.obolibrary.org/obo/CHEBI_34922
T34427 1805-1808 Chemical denotes AP1 http://purl.obolibrary.org/obo/CHEBI_62519

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T98 290-296 Phenotype denotes sepsis http://purl.obolibrary.org/obo/HP_0100806
T99 779-799 Phenotype denotes Rheumatoid arthritis http://purl.obolibrary.org/obo/HP_0001370

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T296 51-66 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T297 196-205 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T298 215-232 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T299 215-224 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T300 271-286 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T301 323-344 http://purl.obolibrary.org/obo/GO_0006954 denotes Inflammatory Response
T302 431-441 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T303 483-506 http://purl.obolibrary.org/obo/GO_0042981 denotes regulation of apoptosis
T304 483-493 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T305 497-506 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T306 497-506 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T307 531-548 http://purl.obolibrary.org/obo/GO_0005125 denotes cytokine activity
T308 550-563 http://purl.obolibrary.org/obo/GO_0048870 denotes cell motility
T309 569-578 http://purl.obolibrary.org/obo/GO_0097194 denotes apoptosis
T310 569-578 http://purl.obolibrary.org/obo/GO_0006915 denotes apoptosis
T311 596-605 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T312 651-657 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T313 689-706 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T314 689-698 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T315 723-740 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T316 723-732 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T317 879-901 http://purl.obolibrary.org/obo/GO_0031639 denotes Plasminogen activating
T318 933-950 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T319 933-942 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T320 965-974 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T321 991-1000 http://purl.obolibrary.org/obo/GO_0097194 denotes Apoptosis
T322 991-1000 http://purl.obolibrary.org/obo/GO_0006915 denotes Apoptosis
T323 1001-1018 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T324 1001-1010 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T325 1028-1045 http://purl.obolibrary.org/obo/GO_0007596 denotes Blood coagulation
T326 1034-1045 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T327 1094-1103 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T328 1131-1140 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T329 1186-1195 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T330 1208-1217 http://purl.obolibrary.org/obo/GO_0009058 denotes Formation
T331 1341-1359 http://purl.obolibrary.org/obo/GO_0007165 denotes Signalling Pathway
T332 1341-1351 http://purl.obolibrary.org/obo/GO_0023052 denotes Signalling
T333 1375-1392 http://purl.obolibrary.org/obo/GO_0007165 denotes Signaling Pathway
T334 1375-1384 http://purl.obolibrary.org/obo/GO_0023052 denotes Signaling
T335 1453-1463 http://purl.obolibrary.org/obo/GO_0008152 denotes Metabolism
T336 1533-1556 http://purl.obolibrary.org/obo/GO_1901755 denotes vitamin D3 biosynthesis
T337 1544-1556 http://purl.obolibrary.org/obo/GO_0009058 denotes biosynthesis
T338 1576-1599 http://purl.obolibrary.org/obo/GO_0009166 denotes nucleotides degradation
T339 1588-1599 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T340 1619-1631 http://purl.obolibrary.org/obo/GO_0009058 denotes biosynthesis
T341 1654-1677 http://purl.obolibrary.org/obo/GO_0009166 denotes nucleotides degradation
T342 1666-1677 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T343 1701-1724 http://purl.obolibrary.org/obo/GO_0009166 denotes nucleotides degradation
T344 1713-1724 http://purl.obolibrary.org/obo/GO_0009056 denotes degradation
T345 1778-1793 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T346 1864-1873 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T347 1901-1910 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T449 0-130 Sentence denotes Table 4 BioProject data analysis for differential gene expression between non-treated and SARS-CoV-2-treated NEHB and A549 cells.
T450 131-151 Sentence denotes WikiPathways p-Adj
T451 152-208 Sentence denotes Photodynamic therapy-induced NF-kB survival signaling 0
T452 209-244 Sentence denotes IL-18 signaling pathway 8.6 × 10−9
T453 245-308 Sentence denotes miRNAs involvement in the immune response in sepsis 2.4 × 10−8
T454 309-356 Sentence denotes Cytokines and Inflammatory Response 9.9 × 10−7
T455 357-382 Sentence denotes Lung fibrosis 2.5 × 10−6
T456 383-400 Sentence denotes BioPlanet p-Adj
T457 401-416 Sentence denotes Oncostatin M 0
T458 417-468 Sentence denotes Interleukin-1 regulation of extracellular matrix 0
T459 469-509 Sentence denotes Interleukin-5 regulation of apoptosis 0
T460 510-581 Sentence denotes TNF-alpha effects on cytokine activity, cell motility, and apoptosis 0
T461 582-669 Sentence denotes Immune system signaling by interferons, interleukins, prolactin, and growth hormones 0
T462 670-682 Sentence denotes KEGG p-Adj
T463 683-718 Sentence denotes IL-17 signaling pathway 1.3 × 10−9
T464 719-752 Sentence denotes TNF signaling pathway 1.6 × 10−9
T465 753-778 Sentence denotes Legionellosis 3.5 × 10−9
T466 779-811 Sentence denotes Rheumatoid arthritis 5.4 × 10−9
T467 812-862 Sentence denotes Cytokine-cytokine receptor interaction 6.6 × 10−9
T468 863-878 Sentence denotes PANTHER p-Adj
T469 879-918 Sentence denotes Plasminogen activating cascade 0.00156
T470 919-959 Sentence denotes Toll receptor signaling pathway 0.00911
T471 960-990 Sentence denotes CCKR signaling map ST 0.02550
T472 991-1027 Sentence denotes Apoptosis signaling pathway 0.10282
T473 1028-1054 Sentence denotes Blood coagulation 0.10433
T474 1055-1071 Sentence denotes REACTOME p-Adj
T475 1072-1115 Sentence denotes Interferon alpha/beta signaling 1.6 × 10−9
T476 1116-1152 Sentence denotes Interleukin-10 signaling 2.5 × 10−9
T477 1153-1207 Sentence denotes Interleukin-4 and Interleukin-13 signaling 2.4 × 10−7
T478 1208-1255 Sentence denotes Formation of the cornified envelope 1.3 × 10−5
T479 1256-1300 Sentence denotes Chemokine receptors bind chemokines 0.00047
T480 1301-1334 Sentence denotes Small Molecule Pathway DB p-Adj
T481 1335-1368 Sentence denotes CD40L Signalling Pathway 0.25268
T482 1369-1401 Sentence denotes NF-kB Signaling Pathway 0.25268
T483 1402-1439 Sentence denotes Toll-Like Receptor Pathway 2 0.25268
T484 1440-1480 Sentence denotes Capecitabine Metabolism Pathway 0.25268
T485 1481-1517 Sentence denotes Capecitabine Action Pathway 0.25268
T486 1518-1532 Sentence denotes BIOCYC p-Adj
T487 1533-1565 Sentence denotes vitamin D3 biosynthesis 0.03597
T488 1566-1608 Sentence denotes guanosine nucleotides degradation 0.03597
T489 1609-1643 Sentence denotes retinoate biosynthesis II 0.03597
T490 1644-1690 Sentence denotes guanosine nucleotides degradation III 0.03597
T491 1691-1736 Sentence denotes adenosine nucleotides degradation II 0.03597
T492 1737-1767 Sentence denotes Pathway Interaction DB p-Adj
T493 1768-1849 Sentence denotes Validated transcriptional targets of AP1 family members Fra1 and Fra2 3.8 × 10−5
T494 1850-1889 Sentence denotes IL23-mediated signaling events 0.00050
T495 1890-1919 Sentence denotes CD40/CD40L signaling 0.02539
T496 1920-1971 Sentence denotes Glucocorticoid receptor regulatory network 0.02603
T497 1972-2009 Sentence denotes LPA receptor mediated events 0.04171

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1735 210-215 Gene denotes L-18 Gene:3606
1736 402-415 Gene denotes ncostatin M Gene:5008
1737 418-431 Gene denotes nterleukin-1 Gene:3552
1738 511-520 Gene denotes NF-alpha Gene:7124
1739 637-646 Gene denotes rolactin, Gene:5617
1740 684-689 Gene denotes L-17 Gene:3605
1741 720-723 Gene denotes NF Gene:7124
1742 1073-1094 Gene denotes nterferon alpha/beta Gene:3440
1743 1117-1131 Gene denotes nterleukin-10 Gene:3586
1744 1154-1167 Gene denotes nterleukin-4 Gene:3565
1745 1172-1186 Gene denotes nterleukin-13 Gene:3596
1746 1336-1341 Gene denotes D40L Gene:959
1747 1825-1829 Gene denotes ra1 Gene:8061
1748 1834-1839 Gene denotes ra2 Gene:2355
1749 1851-1855 Gene denotes L23- Gene:51561
1750 1891-1895 Gene denotes D40/ Gene:958
1751 1896-1901 Gene denotes D40L Gene:959
1752 470-483 Gene denotes nterleukin-5 Gene:3567
1753 1692-1701 Chemical denotes denosine MESH:D000241
1754 291-298 Disease denotes epsis MESH:D018805
1755 363-372 Disease denotes ibrosis MESH:D005355
1756 754-768 Disease denotes egionellosis MESH:D007876
1757 780-801 Disease denotes heumatoid arthritis MESH:D001172
1760 91-101 Species denotes SARS-CoV-2 Tax:2697049
1761 119-123 CellLine denotes A549 CVCL:0023