PMC:7352545 / 88587-89092
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T859 | 13-30 | Body_part | denotes | glycosaminoglycan | http://purl.org/sig/ont/fma/fma63011 |
| T860 | 32-35 | Body_part | denotes | GAG | http://purl.org/sig/ont/fma/fma63011 |
| T861 | 91-97 | Body_part | denotes | serine | http://purl.org/sig/ont/fma/fma82764 |
| T862 | 102-104 | Body_part | denotes | HS | http://purl.org/sig/ont/fma/fma63023 |
| T863 | 110-112 | Body_part | denotes | HS | http://purl.org/sig/ont/fma/fma63023 |
| T864 | 141-146 | Body_part | denotes | sugar | http://purl.org/sig/ont/fma/fma82737 |
| T865 | 191-193 | Body_part | denotes | HS | http://purl.org/sig/ont/fma/fma63023 |
| T866 | 202-207 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T867 | 242-245 | Body_part | denotes | GAG | http://purl.org/sig/ont/fma/fma63011 |
| T868 | 364-379 | Body_part | denotes | heparan sulfate | http://purl.org/sig/ont/fma/fma63023 |
| T869 | 395-410 | Body_part | denotes | glucuronic acid | http://purl.org/sig/ont/fma/fma82798 |
| T870 | 412-416 | Body_part | denotes | GlcA | http://purl.org/sig/ont/fma/fma82798 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 4053 | 13-30 | Chemical | denotes | glycosaminoglycan | MESH:D006025 |
| 4054 | 32-35 | Chemical | denotes | GAG | MESH:D006025 |
| 4055 | 45-60 | Chemical | denotes | tetrasaccharide | |
| 4056 | 91-97 | Chemical | denotes | serine | MESH:D012694 |
| 4057 | 102-104 | Chemical | denotes | HS | MESH:D006497 |
| 4058 | 110-112 | Chemical | denotes | HS | MESH:D006497 |
| 4059 | 242-245 | Chemical | denotes | GAG | MESH:D006025 |
| 4060 | 268-276 | Chemical | denotes | GlcAT-II | |
| 4061 | 364-379 | Chemical | denotes | heparan sulfate | MESH:D006497 |
| 4062 | 391-410 | Chemical | denotes | β-D-glucuronic acid | |
| 4063 | 412-416 | Chemical | denotes | GlcA | |
| 4064 | 419-436 | Chemical | denotes | α-L-iduronic acid | |
| 4065 | 438-442 | Chemical | denotes | IdoA | |
| 4066 | 448-475 | Chemical | denotes | 2-O-sulfo-α-L-iduronic acid | |
| 4067 | 477-481 | Chemical | denotes | IdoA |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1186 | 102-109 | http://purl.obolibrary.org/obo/PR_000001932 | denotes | HS; (A) |
| T1187 | 125-126 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T1188 | 202-207 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T56175 | 13-30 | Chemical | denotes | glycosaminoglycan | http://purl.obolibrary.org/obo/CHEBI_18085 |
| T77968 | 32-35 | Chemical | denotes | GAG | http://purl.obolibrary.org/obo/CHEBI_143889|http://purl.obolibrary.org/obo/CHEBI_18085 |
| T916 | 45-60 | Chemical | denotes | tetrasaccharide | http://purl.obolibrary.org/obo/CHEBI_50126 |
| T917 | 70-73 | Chemical | denotes | Gal | http://purl.obolibrary.org/obo/CHEBI_28260 |
| T918 | 77-80 | Chemical | denotes | Gal | http://purl.obolibrary.org/obo/CHEBI_28260 |
| T46997 | 84-87 | Chemical | denotes | Xyl | http://purl.obolibrary.org/obo/CHEBI_18222 |
| T920 | 91-97 | Chemical | denotes | serine | http://purl.obolibrary.org/obo/CHEBI_17822 |
| T921 | 102-104 | Chemical | denotes | HS | http://purl.obolibrary.org/obo/CHEBI_74056 |
| T922 | 110-112 | Chemical | denotes | HS | http://purl.obolibrary.org/obo/CHEBI_74056 |
| T923 | 191-193 | Chemical | denotes | HS | http://purl.obolibrary.org/obo/CHEBI_74056 |
| T31866 | 242-245 | Chemical | denotes | GAG | http://purl.obolibrary.org/obo/CHEBI_143889|http://purl.obolibrary.org/obo/CHEBI_18085 |
| T37633 | 274-276 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
| T927 | 320-322 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
| T84729 | 356-358 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
| T929 | 364-379 | Chemical | denotes | heparan sulfate | http://purl.obolibrary.org/obo/CHEBI_28815 |
| T12333 | 364-371 | Chemical | denotes | heparan | http://purl.obolibrary.org/obo/CHEBI_24500 |
| T931 | 372-379 | Chemical | denotes | sulfate | http://purl.obolibrary.org/obo/CHEBI_16189 |
| T932 | 393-410 | Chemical | denotes | D-glucuronic acid | http://purl.obolibrary.org/obo/CHEBI_4178|http://purl.obolibrary.org/obo/CHEBI_47952|http://purl.obolibrary.org/obo/CHEBI_47953 |
| T57649 | 395-410 | Chemical | denotes | glucuronic acid | http://purl.obolibrary.org/obo/CHEBI_24298 |
| T936 | 406-410 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T937 | 412-416 | Chemical | denotes | GlcA | http://purl.obolibrary.org/obo/CHEBI_24298 |
| T938 | 421-436 | Chemical | denotes | L-iduronic acid | http://purl.obolibrary.org/obo/CHEBI_28481|http://purl.obolibrary.org/obo/CHEBI_85187 |
| T55375 | 423-436 | Chemical | denotes | iduronic acid | http://purl.obolibrary.org/obo/CHEBI_24769 |
| T15629 | 432-436 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T942 | 438-442 | Chemical | denotes | IdoA | http://purl.obolibrary.org/obo/CHEBI_24769 |
| T34978 | 452-457 | Chemical | denotes | sulfo | http://purl.obolibrary.org/obo/CHEBI_29922 |
| T944 | 460-475 | Chemical | denotes | L-iduronic acid | http://purl.obolibrary.org/obo/CHEBI_28481|http://purl.obolibrary.org/obo/CHEBI_85187 |
| T946 | 462-475 | Chemical | denotes | iduronic acid | http://purl.obolibrary.org/obo/CHEBI_24769 |
| T947 | 471-475 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
| T66810 | 477-481 | Chemical | denotes | IdoA | http://purl.obolibrary.org/obo/CHEBI_24769 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T162 | 128-137 | http://purl.obolibrary.org/obo/GO_0051923 | denotes | Sulfation |
| T163 | 161-170 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | Synthesis |
| T164 | 175-187 | http://purl.obolibrary.org/obo/GO_0051179 | denotes | localization |
| T165 | 246-255 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
| T166 | 380-389 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
| T167 | 412-416 | http://purl.obolibrary.org/obo/GO_0043879 | denotes | GlcA |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T929 | 209-505 | Sentence | denotes | Glycosyltransferases involved in GAG synthesis include (i) GlcAT-II (glucuronosyltransferase) and (ii) GlcNAcT-II (N-acetylglucosaminyltransferase II) for heparan sulfate synthesis. β-D-glucuronic acid (GlcA), α-L-iduronic acid (IdoA) and 2-O-sulfo-α-L-iduronic acid (IdoA(2S) are composed [124]. |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T29 | 102-104 | GlycoEpitope | denotes | HS | http://www.glycoepitope.jp/epitopes/EP0086 |
| T30 | 110-112 | GlycoEpitope | denotes | HS | http://www.glycoepitope.jp/epitopes/EP0086 |
| T31 | 191-193 | GlycoEpitope | denotes | HS | http://www.glycoepitope.jp/epitopes/EP0086 |
| T32 | 364-379 | GlycoEpitope | denotes | heparan sulfate | http://www.glycoepitope.jp/epitopes/EP0086 |