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PMC:7352545 / 88587-89092 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T859 13-30 Body_part denotes glycosaminoglycan http://purl.org/sig/ont/fma/fma63011
T860 32-35 Body_part denotes GAG http://purl.org/sig/ont/fma/fma63011
T861 91-97 Body_part denotes serine http://purl.org/sig/ont/fma/fma82764
T862 102-104 Body_part denotes HS http://purl.org/sig/ont/fma/fma63023
T863 110-112 Body_part denotes HS http://purl.org/sig/ont/fma/fma63023
T864 141-146 Body_part denotes sugar http://purl.org/sig/ont/fma/fma82737
T865 191-193 Body_part denotes HS http://purl.org/sig/ont/fma/fma63023
T866 202-207 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T867 242-245 Body_part denotes GAG http://purl.org/sig/ont/fma/fma63011
T868 364-379 Body_part denotes heparan sulfate http://purl.org/sig/ont/fma/fma63023
T869 395-410 Body_part denotes glucuronic acid http://purl.org/sig/ont/fma/fma82798
T870 412-416 Body_part denotes GlcA http://purl.org/sig/ont/fma/fma82798

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
4053 13-30 Chemical denotes glycosaminoglycan MESH:D006025
4054 32-35 Chemical denotes GAG MESH:D006025
4055 45-60 Chemical denotes tetrasaccharide
4056 91-97 Chemical denotes serine MESH:D012694
4057 102-104 Chemical denotes HS MESH:D006497
4058 110-112 Chemical denotes HS MESH:D006497
4059 242-245 Chemical denotes GAG MESH:D006025
4060 268-276 Chemical denotes GlcAT-II
4061 364-379 Chemical denotes heparan sulfate MESH:D006497
4062 391-410 Chemical denotes β-D-glucuronic acid
4063 412-416 Chemical denotes GlcA
4064 419-436 Chemical denotes α-L-iduronic acid
4065 438-442 Chemical denotes IdoA
4066 448-475 Chemical denotes 2-O-sulfo-α-L-iduronic acid
4067 477-481 Chemical denotes IdoA

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1186 102-109 http://purl.obolibrary.org/obo/PR_000001932 denotes HS; (A)
T1187 125-126 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T1188 202-207 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T56175 13-30 Chemical denotes glycosaminoglycan http://purl.obolibrary.org/obo/CHEBI_18085
T77968 32-35 Chemical denotes GAG http://purl.obolibrary.org/obo/CHEBI_143889|http://purl.obolibrary.org/obo/CHEBI_18085
T916 45-60 Chemical denotes tetrasaccharide http://purl.obolibrary.org/obo/CHEBI_50126
T917 70-73 Chemical denotes Gal http://purl.obolibrary.org/obo/CHEBI_28260
T918 77-80 Chemical denotes Gal http://purl.obolibrary.org/obo/CHEBI_28260
T46997 84-87 Chemical denotes Xyl http://purl.obolibrary.org/obo/CHEBI_18222
T920 91-97 Chemical denotes serine http://purl.obolibrary.org/obo/CHEBI_17822
T921 102-104 Chemical denotes HS http://purl.obolibrary.org/obo/CHEBI_74056
T922 110-112 Chemical denotes HS http://purl.obolibrary.org/obo/CHEBI_74056
T923 191-193 Chemical denotes HS http://purl.obolibrary.org/obo/CHEBI_74056
T31866 242-245 Chemical denotes GAG http://purl.obolibrary.org/obo/CHEBI_143889|http://purl.obolibrary.org/obo/CHEBI_18085
T37633 274-276 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T927 320-322 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T84729 356-358 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T929 364-379 Chemical denotes heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T12333 364-371 Chemical denotes heparan http://purl.obolibrary.org/obo/CHEBI_24500
T931 372-379 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T932 393-410 Chemical denotes D-glucuronic acid http://purl.obolibrary.org/obo/CHEBI_4178|http://purl.obolibrary.org/obo/CHEBI_47952|http://purl.obolibrary.org/obo/CHEBI_47953
T57649 395-410 Chemical denotes glucuronic acid http://purl.obolibrary.org/obo/CHEBI_24298
T936 406-410 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T937 412-416 Chemical denotes GlcA http://purl.obolibrary.org/obo/CHEBI_24298
T938 421-436 Chemical denotes L-iduronic acid http://purl.obolibrary.org/obo/CHEBI_28481|http://purl.obolibrary.org/obo/CHEBI_85187
T55375 423-436 Chemical denotes iduronic acid http://purl.obolibrary.org/obo/CHEBI_24769
T15629 432-436 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T942 438-442 Chemical denotes IdoA http://purl.obolibrary.org/obo/CHEBI_24769
T34978 452-457 Chemical denotes sulfo http://purl.obolibrary.org/obo/CHEBI_29922
T944 460-475 Chemical denotes L-iduronic acid http://purl.obolibrary.org/obo/CHEBI_28481|http://purl.obolibrary.org/obo/CHEBI_85187
T946 462-475 Chemical denotes iduronic acid http://purl.obolibrary.org/obo/CHEBI_24769
T947 471-475 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T66810 477-481 Chemical denotes IdoA http://purl.obolibrary.org/obo/CHEBI_24769

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T162 128-137 http://purl.obolibrary.org/obo/GO_0051923 denotes Sulfation
T163 161-170 http://purl.obolibrary.org/obo/GO_0009058 denotes Synthesis
T164 175-187 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T165 246-255 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T166 380-389 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T167 412-416 http://purl.obolibrary.org/obo/GO_0043879 denotes GlcA

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T929 209-505 Sentence denotes Glycosyltransferases involved in GAG synthesis include (i) GlcAT-II (glucuronosyltransferase) and (ii) GlcNAcT-II (N-acetylglucosaminyltransferase II) for heparan sulfate synthesis. β-D-glucuronic acid (GlcA), α-L-iduronic acid (IdoA) and 2-O-sulfo-α-L-iduronic acid (IdoA(2S) are composed [124].

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T29 102-104 GlycoEpitope denotes HS http://www.glycoepitope.jp/epitopes/EP0086
T30 110-112 GlycoEpitope denotes HS http://www.glycoepitope.jp/epitopes/EP0086
T31 191-193 GlycoEpitope denotes HS http://www.glycoepitope.jp/epitopes/EP0086
T32 364-379 GlycoEpitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086