PMC:7352545 / 43164-44265
Annnotations
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T186 | 639-641 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | SA |
| T187 | 652-654 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | SA |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T365 | 255-267 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T366 | 560-572 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T367 | 610-622 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T368 | 868-875 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T369 | 961-974 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
| T370 | 1003-1010 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T147 | 465-473 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T148 | 950-958 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T586 | 82-88 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | Animal |
| T587 | 93-98 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T588 | 221-228 | http://purl.obolibrary.org/obo/NCBITaxon_33208 | denotes | animals |
| T589 | 232-237 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T590 | 526-527 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T591 | 705-707 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T592 | 887-892 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T593 | 942-943 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T594 | 1042-1043 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1384 | 39-48 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
| T1385 | 255-267 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T1386 | 483-494 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
| T1387 | 560-572 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T1388 | 610-622 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T1389 | 639-641 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667 |
| T1394 | 652-654 | Chemical | denotes | SA | http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667 |
| T1399 | 868-875 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T1400 | 961-974 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T1401 | 1003-1010 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T69 | 322-329 | http://purl.obolibrary.org/obo/GO_0009606 | denotes | tropism |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T412 | 0-81 | Sentence | denotes | CoV S spikes recognize diverse surface molecules as the attachment or entry site. |
| T413 | 82-238 | Sentence | denotes | Animal and human coronaviruses evolve to acquire the same host receptors and attachment factors and overcome the interspecies barrier from animals to human. |
| T414 | 239-372 | Sentence | denotes | Specifically, S glycoprotein interaction with its binding receptor determines host tropism, pathogenicity and therapeutic clues [80]. |
| T415 | 373-435 | Sentence | denotes | CoVs recognize multiple host receptors via distinct S domains. |
| T416 | 436-522 | Sentence | denotes | The host receptors for β-CoV SARS-CoV includes angiotensin-converting enzyme 2 (ACE2). |
| T417 | 523-598 | Sentence | denotes | As a lineage C β-CoV, the MERS-CoV S glycoprotein binds to DPP4 [81,82,83]. |
| T418 | 599-673 | Sentence | denotes | MERS-CoV S glycoprotein recognizes α2,3-SA over α2,6-SA-bearing receptors. |
| T419 | 674-755 | Sentence | denotes | The N-terminal subunits of the S1/S1A/S1B/S1D complex of MERS-CoV recognize DPP4. |
| T420 | 756-824 | Sentence | denotes | MERS-CoV recognizes CEACAM5 as the attachment factor for entry [78]. |
| T421 | 825-988 | Sentence | denotes | Among the six HCoVs, the α-CoV HCoV-229E S protein recognizes human APN (hAPN) [84]. α-CoV HCoV-NL63 and the lineage B β-CoV SARS-CoV S glycoproteins bind to ACE2. |
| T422 | 989-1101 | Sentence | denotes | Meanwhile the protein receptors specific for lineage A β-CoVs such as HCoV-HKU1 and HCoV-OC43 are not known yet. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32604730-23486063-51944038 | 588-590 | 23486063 | denotes | 81 |
| 32604730-32264791-51944039 | 591-593 | 32264791 | denotes | 82 |
| 32604730-32094589-51944040 | 594-596 | 32094589 | denotes | 83 |
| 32604730-29684066-51944041 | 820-822 | 29684066 | denotes | 78 |
| 32604730-31650956-51944042 | 905-907 | 31650956 | denotes | 84 |
| T81414 | 588-590 | 23486063 | denotes | 81 |
| T60977 | 591-593 | 32264791 | denotes | 82 |
| T60147 | 594-596 | 32094589 | denotes | 83 |
| T11222 | 820-822 | 29684066 | denotes | 78 |
| T35004 | 905-907 | 31650956 | denotes | 84 |