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PMC:7352545 / 18413-19469 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T34 312-314 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA
T35 344-346 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA
T36 543-545 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA
T37 674-676 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA
T38 766-768 https://glytoucan.org/Structures/Glycans/G81533KY denotes SA

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T201 46-49 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T202 195-198 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T203 619-631 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T204 840-852 Body_part denotes erythrocytes http://purl.org/sig/ont/fma/fma62845

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
552 766-768 Gene denotes SA Gene:6296
553 59-63 Species denotes CoVs Tax:11118
554 394-411 Species denotes influenza C virus Tax:11552
555 432-435 Species denotes CoV Tax:11118
556 539-542 Species denotes CoV Tax:11118
557 832-839 Species denotes chicken Tax:9031
558 980-997 Species denotes influenza viruses Tax:11308
559 1044-1055 Species denotes mumps virus Tax:11161
560 786-795 Species denotes influenza Tax:11552
561 1016-1025 Species denotes Newcastle Tax:11176
562 0-18 Chemical denotes HE hemagglutinates
563 465-484 Disease denotes salmon anemia virus MESH:D000740

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T78 394-403 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T79 472-478 Disease denotes anemia http://purl.obolibrary.org/obo/MONDO_0002280
T80 786-795 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T81 980-989 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T82 1016-1033 Disease denotes Newcastle disease http://purl.obolibrary.org/obo/MONDO_0005875
T83 1044-1049 Disease denotes mumps http://purl.obolibrary.org/obo/MONDO_0000989

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T211 50-57 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T212 69-73 http://purl.obolibrary.org/obo/CLO_0008774 denotes RDEs
T213 199-206 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T214 233-237 http://purl.obolibrary.org/obo/CLO_0008774 denotes RDEs
T215 406-411 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T216 479-484 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T217 588-595 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T218 723-726 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T219 742-750 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T220 796-797 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T221 798-799 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T222 800-807 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T223 832-839 http://purl.obolibrary.org/obo/NCBITaxon_9031 denotes chicken
T224 840-852 http://purl.obolibrary.org/obo/CL_0000232 denotes erythrocytes
T225 862-864 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T226 916-921 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T227 990-997 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T228 1050-1055 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T365 304-306 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T366 312-314 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667
T371 317-323 Chemical denotes acetyl http://purl.obolibrary.org/obo/CHEBI_40574|http://purl.obolibrary.org/obo/CHEBI_46887
T373 344-346 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667
T378 349-355 Chemical denotes acetyl http://purl.obolibrary.org/obo/CHEBI_40574|http://purl.obolibrary.org/obo/CHEBI_46887
T380 543-545 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667
T385 619-631 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T386 674-676 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667
T391 766-768 Chemical denotes SA http://purl.obolibrary.org/obo/CHEBI_35962|http://purl.obolibrary.org/obo/CHEBI_38358|http://purl.obolibrary.org/obo/CHEBI_45373|http://purl.obolibrary.org/obo/CHEBI_74801|http://purl.obolibrary.org/obo/CHEBI_26667

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T172 0-42 Sentence denotes HE hemagglutinates and destroys receptors.
T173 43-171 Sentence denotes As RNA viruses, CoVs bear RDEs, which are used in effective attachment to hosts and also reversely in detachment from the hosts.
T174 172-238 Sentence denotes For example, enveloped RNA viruses evade the hosts via their RDEs.
T175 239-343 Sentence denotes Currently, RDE-related functional enzymes such as neuraminidase (NA) and SA-O-acetyl-esterase are known.
T176 344-510 Sentence denotes SA-O-acetyl-esterase was originally identified in influenza C virus and in nidoviruses (CoV and torovirus) as well as in salmon anemia virus (teleost orthomyxovirus).
T177 511-596 Sentence denotes The origin and evolution of CoV SA-O-acetylesterases are correlated to other viruses.
T178 597-715 Sentence denotes The fusion event of S glycoprotein and HE is specific for HCoV attachment to SA-associated receptors in the host [25].
T179 716-756 Sentence denotes The HE has acetylesterase activity [26].
T180 757-866 Sentence denotes In early SA-related biology, influenza A/B viruses were found to recognize chicken erythrocytes in 1942 [27].
T181 867-942 Sentence denotes They caused hemagglutination through clumping by virus-borne hemagglutinin.
T182 943-1056 Sentence denotes These phenomena were widely found in influenza viruses, paramyxoviruses, Newcastle disease (NDV) and mumps virus.

2_test

Id Subject Object Predicate Lexical cue
32604730-25926653-51943968 752-754 25926653 denotes 26
32604730-19871229-51943969 862-864 19871229 denotes 27
T97535 752-754 25926653 denotes 26
T59612 862-864 19871229 denotes 27

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 472-478 Phenotype denotes anemia http://purl.obolibrary.org/obo/HP_0001903