PMC:7341831 / 8012-8312 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T33","span":{"begin":27,"end":31},"obj":"Body_part"},{"id":"T34","span":{"begin":114,"end":128},"obj":"Body_part"},{"id":"T36","span":{"begin":214,"end":229},"obj":"Body_part"},{"id":"T37","span":{"begin":259,"end":263},"obj":"Body_part"},{"id":"T38","span":{"begin":284,"end":292},"obj":"Body_part"}],"attributes":[{"id":"A33","pred":"fma_id","subj":"T33","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A34","pred":"fma_id","subj":"T34","obj":"http://purl.org/sig/ont/fma/fma13121"},{"id":"A35","pred":"fma_id","subj":"T34","obj":"http://purl.org/sig/ont/fma/fma67480"},{"id":"A36","pred":"fma_id","subj":"T36","obj":"http://purl.org/sig/ont/fma/fma27360"},{"id":"A37","pred":"fma_id","subj":"T37","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A38","pred":"fma_id","subj":"T38","obj":"http://purl.org/sig/ont/fma/fma264783"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T22","span":{"begin":27,"end":31},"obj":"Body_part"},{"id":"T23","span":{"begin":214,"end":229},"obj":"Body_part"},{"id":"T24","span":{"begin":214,"end":218},"obj":"Body_part"},{"id":"T25","span":{"begin":219,"end":229},"obj":"Body_part"},{"id":"T26","span":{"begin":259,"end":263},"obj":"Body_part"}],"attributes":[{"id":"A22","pred":"uberon_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A23","pred":"uberon_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/UBERON_0008946"},{"id":"A24","pred":"uberon_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A25","pred":"uberon_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/UBERON_0000353"},{"id":"A26","pred":"uberon_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-PubTator","denotations":[{"id":"198","span":{"begin":49,"end":56},"obj":"Species"},{"id":"204","span":{"begin":70,"end":78},"obj":"Disease"},{"id":"205","span":{"begin":174,"end":195},"obj":"Disease"},{"id":"206","span":{"begin":259,"end":270},"obj":"Disease"},{"id":"207","span":{"begin":284,"end":299},"obj":"Disease"}],"attributes":[{"id":"A198","pred":"tao:has_database_id","subj":"198","obj":"Tax:9606"},{"id":"A204","pred":"tao:has_database_id","subj":"204","obj":"MESH:C000657245"},{"id":"A205","pred":"tao:has_database_id","subj":"205","obj":"MESH:D011014"},{"id":"A206","pred":"tao:has_database_id","subj":"206","obj":"MESH:D055370"},{"id":"A207","pred":"tao:has_database_id","subj":"207","obj":"MESH:D055370"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T60","span":{"begin":70,"end":78},"obj":"Disease"},{"id":"T61","span":{"begin":129,"end":139},"obj":"Disease"},{"id":"T62","span":{"begin":186,"end":195},"obj":"Disease"},{"id":"T63","span":{"begin":253,"end":270},"obj":"Disease"},{"id":"T65","span":{"begin":264,"end":270},"obj":"Disease"}],"attributes":[{"id":"A60","pred":"mondo_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A61","pred":"mondo_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/MONDO_0043839"},{"id":"A62","pred":"mondo_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A63","pred":"mondo_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A64","pred":"mondo_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/MONDO_0015796"},{"id":"A65","pred":"mondo_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T59","span":{"begin":27,"end":31},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T60","span":{"begin":27,"end":31},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T61","span":{"begin":47,"end":48},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T62","span":{"begin":214,"end":218},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T63","span":{"begin":214,"end":218},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T64","span":{"begin":240,"end":241},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T65","span":{"begin":259,"end":263},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T66","span":{"begin":259,"end":263},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T68","span":{"begin":62,"end":65},"obj":"Chemical"},{"id":"T70","span":{"begin":89,"end":92},"obj":"Chemical"}],"attributes":[{"id":"A68","pred":"chebi_id","subj":"T68","obj":"http://purl.obolibrary.org/obo/CHEBI_17824"},{"id":"A69","pred":"chebi_id","subj":"T68","obj":"http://purl.obolibrary.org/obo/CHEBI_30802"},{"id":"A70","pred":"chebi_id","subj":"T70","obj":"http://purl.obolibrary.org/obo/CHEBI_17824"},{"id":"A71","pred":"chebi_id","subj":"T70","obj":"http://purl.obolibrary.org/obo/CHEBI_30802"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-sentences","denotations":[{"id":"T77","span":{"begin":0,"end":300},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T29","span":{"begin":62,"end":65},"obj":"Phenotype"},{"id":"T30","span":{"begin":89,"end":92},"obj":"Phenotype"},{"id":"T31","span":{"begin":186,"end":195},"obj":"Phenotype"},{"id":"T32","span":{"begin":253,"end":270},"obj":"Phenotype"},{"id":"T33","span":{"begin":276,"end":299},"obj":"Phenotype"}],"attributes":[{"id":"A29","pred":"hp_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/HP_0020103"},{"id":"A30","pred":"hp_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/HP_0020103"},{"id":"A31","pred":"hp_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A32","pred":"hp_id","subj":"T32","obj":"http://www.orpha.net/ORDO/Orphanet_178320"},{"id":"A33","pred":"hp_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/HP_0033006"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"2_test","denotations":[{"id":"32638890-32470620-134289068","span":{"begin":0,"end":1},"obj":"32470620"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T135","span":{"begin":16,"end":26},"obj":"GO:0016265"},{"id":"T136","span":{"begin":27,"end":31},"obj":"UBERON:0002048"},{"id":"T137","span":{"begin":70,"end":78},"obj":"SP_7"},{"id":"T138","span":{"begin":114,"end":123},"obj":"UBERON:0004242"},{"id":"T139","span":{"begin":124,"end":128},"obj":"UBERON:0000060"},{"id":"T140","span":{"begin":214,"end":229},"obj":"UBERON:0008946"},{"id":"T141","span":{"begin":259,"end":263},"obj":"UBERON:0002048"},{"id":"T142","span":{"begin":284,"end":292},"obj":"UBERON:0003215"},{"id":"T61699","span":{"begin":16,"end":26},"obj":"GO:0016265"},{"id":"T93941","span":{"begin":27,"end":31},"obj":"UBERON:0002048"},{"id":"T73256","span":{"begin":70,"end":78},"obj":"SP_7"},{"id":"T83346","span":{"begin":114,"end":123},"obj":"UBERON:0004242"},{"id":"T74144","span":{"begin":124,"end":128},"obj":"UBERON:0000060"},{"id":"T44419","span":{"begin":214,"end":229},"obj":"UBERON:0008946"},{"id":"T67181","span":{"begin":259,"end":263},"obj":"UBERON:0002048"},{"id":"T79335","span":{"begin":284,"end":292},"obj":"UBERON:0003215"}],"text":"8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage."}