PMC:7341831 / 8012-8312
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T33 | 27-31 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T34 | 114-128 | Body_part | denotes | bronchial wall | http://purl.org/sig/ont/fma/fma13121|http://purl.org/sig/ont/fma/fma67480 |
| T36 | 214-229 | Body_part | denotes | lung parenchyma | http://purl.org/sig/ont/fma/fma27360 |
| T37 | 259-263 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T38 | 284-292 | Body_part | denotes | alveolar | http://purl.org/sig/ont/fma/fma264783 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T22 | 27-31 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T23 | 214-229 | Body_part | denotes | lung parenchyma | http://purl.obolibrary.org/obo/UBERON_0008946 |
| T24 | 214-218 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T25 | 219-229 | Body_part | denotes | parenchyma | http://purl.obolibrary.org/obo/UBERON_0000353 |
| T26 | 259-263 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 198 | 49-56 | Species | denotes | patient | Tax:9606 |
| 204 | 70-78 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 205 | 174-195 | Disease | denotes | necrotizing pneumonia | MESH:D011014 |
| 206 | 259-270 | Disease | denotes | lung injury | MESH:D055370 |
| 207 | 284-299 | Disease | denotes | alveolar damage | MESH:D055370 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T60 | 70-78 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T61 | 129-139 | Disease | denotes | ulceration | http://purl.obolibrary.org/obo/MONDO_0043839 |
| T62 | 186-195 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T63 | 253-270 | Disease | denotes | acute lung injury | http://purl.obolibrary.org/obo/MONDO_0006502|http://purl.obolibrary.org/obo/MONDO_0015796 |
| T65 | 264-270 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T59 | 27-31 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T60 | 27-31 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T61 | 47-48 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T62 | 214-218 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T63 | 214-218 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T64 | 240-241 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T65 | 259-263 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T66 | 259-263 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T68 | 62-65 | Chemical | denotes | IPA | http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802 |
| T70 | 89-92 | Chemical | denotes | IPA | http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T77 | 0-300 | Sentence | denotes | 8 assessed the postmortem lung examination of a patient with IPA and COVID-19, in which IPA was characterized by bronchial wall ulceration associated with multiple spots of necrotizing pneumonia, and the residual lung parenchyma displayed a pattern of acute lung injury with diffuse alveolar damage. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T29 | 62-65 | Phenotype | denotes | IPA | http://purl.obolibrary.org/obo/HP_0020103 |
| T30 | 89-92 | Phenotype | denotes | IPA | http://purl.obolibrary.org/obo/HP_0020103 |
| T31 | 186-195 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T32 | 253-270 | Phenotype | denotes | acute lung injury | http://www.orpha.net/ORDO/Orphanet_178320 |
| T33 | 276-299 | Phenotype | denotes | diffuse alveolar damage | http://purl.obolibrary.org/obo/HP_0033006 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32638890-32470620-134289068 | 0-1 | 32470620 | denotes | 8 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T135 | 16-26 | GO:0016265 | denotes | postmortem |
| T136 | 27-31 | UBERON:0002048 | denotes | lung |
| T137 | 70-78 | SP_7 | denotes | COVID-19 |
| T138 | 114-123 | UBERON:0004242 | denotes | bronchial |
| T139 | 124-128 | UBERON:0000060 | denotes | wall |
| T140 | 214-229 | UBERON:0008946 | denotes | lung parenchyma |
| T141 | 259-263 | UBERON:0002048 | denotes | lung |
| T142 | 284-292 | UBERON:0003215 | denotes | alveolar |
| T61699 | 16-26 | GO:0016265 | denotes | postmortem |
| T93941 | 27-31 | UBERON:0002048 | denotes | lung |
| T73256 | 70-78 | SP_7 | denotes | COVID-19 |
| T83346 | 114-123 | UBERON:0004242 | denotes | bronchial |
| T74144 | 124-128 | UBERON:0000060 | denotes | wall |
| T44419 | 214-229 | UBERON:0008946 | denotes | lung parenchyma |
| T67181 | 259-263 | UBERON:0002048 | denotes | lung |
| T79335 | 284-292 | UBERON:0003215 | denotes | alveolar |