PMC:7340597 / 801-1423
Annnotations
LitCovid_Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 2-15 | https://glytoucan.org/Structures/Glycans/G93424OB | denotes | galactomannan |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T2 | 121-126 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T3 | 334-342 | Body_part | denotes | alveolar | http://purl.org/sig/ont/fma/fma264783 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T2 | 121-126 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 34 | 55-63 | Species | denotes | patients | Tax:9606 |
| 35 | 137-145 | Species | denotes | patients | Tax:9606 |
| 36 | 386-394 | Species | denotes | patients | Tax:9606 |
| 37 | 2-15 | Chemical | denotes | galactomannan | MESH:C012990 |
| 39 | 76-84 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 40 | 96-119 | Disease | denotes | pulmonary aspergillosis | MESH:D055732 |
| 41 | 315-324 | Disease | denotes | pneumonia | MESH:D011014 |
| 42 | 334-349 | Disease | denotes | alveolar damage | MESH:D055370 |
| 43 | 351-359 | Disease | denotes | fibrosis | MESH:D005355 |
| 44 | 409-418 | Disease | denotes | pneumonia | MESH:D011014 |
| 45 | 469-491 | Disease | denotes | invasive aspergillosis | MESH:D055744 |
| 55 | 577-585 | Species | denotes | patients | Tax:9606 |
| 57 | 556-570 | Disease | denotes | critically ill | MESH:D016638 |
| 58 | 571-576 | Disease | denotes | COVID | MESH:C000657245 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T8 | 76-84 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T9 | 106-119 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T10 | 304-324 | Disease | denotes | organizing pneumonia | http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821 |
| T12 | 315-324 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T13 | 398-418 | Disease | denotes | organizing pneumonia | http://purl.obolibrary.org/obo/MONDO_0015265|http://purl.obolibrary.org/obo/MONDO_0056821 |
| T15 | 409-418 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T16 | 469-491 | Disease | denotes | invasive aspergillosis | http://purl.obolibrary.org/obo/MONDO_0000240 |
| T17 | 478-491 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T9 | 121-126 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T10 | 304-314 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | organizing |
| T11 | 398-408 | http://purl.obolibrary.org/obo/OBI_0000245 | denotes | organizing |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 2-15 | Chemical | denotes | galactomannan | http://purl.obolibrary.org/obo/CHEBI_27680 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T2 | 315-324 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T3 | 326-349 | Phenotype | denotes | diffuse alveolar damage | http://purl.obolibrary.org/obo/HP_0033006 |
| T4 | 409-418 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T1 | 2-15 | GlycoEpitope | denotes | galactomannan | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13 | 121-229 | Sentence | denotes | Chest CT in all patients showed ground glass opacities, commonly progressing to nondependent consolidations. |
| T14 | 230-419 | Sentence | denotes | We observed four distinct histopathological patterns: acute fibrinous and organizing pneumonia, diffuse alveolar damage, fibrosis and, in four out of seven patients an organizing pneumonia. |
| T15 | 420-492 | Sentence | denotes | None of the biopsy specimens showed any signs of invasive aspergillosis. |
| T16 | 494-505 | Sentence | denotes | Conclusions |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8 | 2-15 | CHEBI:27680;CHEBI:27680 | denotes | galactomannan |
| T9 | 19-34 | UBERON:0002186;BV_4 | denotes | bronchoalveolar |
| T10 | 35-41 | BV_4 | denotes | lavage |
| T11 | 42-47 | BV_4;UBERON:0006314 | denotes | fluid |
| T12 | 76-84 | SP_7 | denotes | COVID-19 |
| T13 | 96-105 | UBERON:0002048 | denotes | pulmonary |
| T14 | 334-342 | UBERON:0003215 | denotes | alveolar |
| T37393 | 194-208 | GO:0007596 | denotes | ing to nondepe |
| T57275 | 281-287 | UBERON:0001638 | denotes | s: acu |
| T97784 | 288-303 | GO:0007596 | denotes | e fibrinous and |
| T2103 | 324-332 | SP_7 | denotes | , diffus |
| T61739 | 376-385 | UBERON:0002048 | denotes | of seven |
| T56562 | 439-447 | SP_7 | denotes | specimen |
| T20701 | 486-495 | SP_7 | denotes | losis. C |
| T44207 | 594-603 | UBERON:0002048 | denotes | lassic DA |
| T36528 | 604-610 | UBERON:0000479 | denotes | but h |