PMC:7340597 / 12610-13625
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T59 | 167-172 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T60 | 575-580 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T61 | 684-688 | Body_part | denotes | dens | http://purl.org/sig/ont/fma/fma24043 |
| T62 | 857-861 | Body_part | denotes | head | http://purl.org/sig/ont/fma/fma7154 |
| T63 | 871-876 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T64 | 941-972 | Body_part | denotes | right posterior cerebral artery | http://purl.org/sig/ont/fma/fma50584 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T26 | 167-172 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T27 | 575-580 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T28 | 857-861 | Body_part | denotes | head | http://purl.obolibrary.org/obo/UBERON_0000033 |
| T29 | 871-876 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T30 | 947-972 | Body_part | denotes | posterior cerebral artery | http://purl.obolibrary.org/obo/UBERON_0001636 |
| T31 | 957-972 | Body_part | denotes | cerebral artery | http://purl.obolibrary.org/obo/UBERON_0004449 |
| T32 | 966-972 | Body_part | denotes | artery | http://purl.obolibrary.org/obo/UBERON_0001637 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 351 | 395-402 | Species | denotes | patient | Tax:9606 |
| 352 | 809-816 | Species | denotes | Patient | Tax:9606 |
| 353 | 978-985 | Species | denotes | patient | Tax:9606 |
| 354 | 684-688 | Chemical | denotes | dens | MESH:D004052 |
| 355 | 129-137 | Disease | denotes | weakness | MESH:D018908 |
| 356 | 139-144 | Disease | denotes | fever | MESH:D005334 |
| 357 | 149-157 | Disease | denotes | dyspnoea | MESH:D004417 |
| 358 | 463-482 | Disease | denotes | acute renal failure | MESH:D058186 |
| 359 | 603-619 | Disease | denotes | pulmonary emboli | MESH:D011655 |
| 360 | 752-772 | Disease | denotes | nosocomial infection | MESH:D003428 |
| 361 | 871-885 | Disease | denotes | brain ischemia | MESH:D002545 |
| 362 | 893-903 | Disease | denotes | infarction | MESH:D007238 |
| 363 | 986-990 | Disease | denotes | died | MESH:D003643 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T127 | 463-482 | Disease | denotes | acute renal failure | http://purl.obolibrary.org/obo/MONDO_0002492 |
| T128 | 469-482 | Disease | denotes | renal failure | http://purl.obolibrary.org/obo/MONDO_0001106 |
| T129 | 752-772 | Disease | denotes | nosocomial infection | http://purl.obolibrary.org/obo/MONDO_0043544 |
| T130 | 763-772 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T131 | 871-885 | Disease | denotes | brain ischemia | http://purl.obolibrary.org/obo/MONDO_0005299 |
| T132 | 877-885 | Disease | denotes | ischemia | http://purl.obolibrary.org/obo/MONDO_0005053 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T93 | 0-1 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T94 | 14-18 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
| T95 | 14-18 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
| T96 | 167-172 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T97 | 575-580 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T98 | 750-751 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T99 | 857-861 | http://purl.obolibrary.org/obo/UBERON_0000033 | denotes | head |
| T100 | 857-861 | http://www.ebi.ac.uk/efo/EFO_0000964 | denotes | head |
| T101 | 871-876 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T102 | 871-876 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T103 | 947-956 | http://purl.obolibrary.org/obo/UBERON_0001353 | denotes | posterior |
| T104 | 966-972 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | artery |
| T105 | 966-972 | http://www.ebi.ac.uk/efo/EFO_0000814 | denotes | artery |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T82 | 14-18 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
| T83 | 98-100 | Chemical | denotes | ED | http://purl.obolibrary.org/obo/CHEBI_73503 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T31 | 121-137 | Phenotype | denotes | general weakness | http://purl.obolibrary.org/obo/HP_0003324 |
| T32 | 139-144 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T33 | 149-157 | Phenotype | denotes | dyspnoea | http://purl.obolibrary.org/obo/HP_0002094 |
| T34 | 463-482 | Phenotype | denotes | acute renal failure | http://purl.obolibrary.org/obo/HP_0001919 |
| T35 | 871-885 | Phenotype | denotes | brain ischemia | http://purl.obolibrary.org/obo/HP_0002637 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T103 | 0-158 | Sentence | denotes | A 77-year old male without significant medical history was evaluated in our emergency department (ED) with complaints of general weakness, fever and dyspnoea. |
| T104 | 159-373 | Sentence | denotes | Initial chest CT showed extensive bilateral areas of ground-glass opacity with both central and peripheral distribution, patchy subpleural non-dependant consolidations and areas with subpleural sparing (Fig. 1-1A). |
| T105 | 374-533 | Sentence | denotes | Soon after admission patient was in need of mechanical ventilatory support and developed acute renal failure for which renal replacement therapy was initiated. |
| T106 | 534-749 | Sentence | denotes | After six days of mechanical ventilation chest CT-angiography showed pulmonary emboli along with new areas of ground-glass opacity and progression of dens subpleural consolidations with air-bronchograms (Fig. 1-1B). |
| T107 | 750-808 | Sentence | denotes | A nosocomial infection was ruled out by bronchial culture. |
| T108 | 809-973 | Sentence | denotes | Patient's neurologic status deteriorated and CT head revealed brain ischemia due to infarction of the area supplied by the left and right posterior cerebral artery. |
| T109 | 974-1015 | Sentence | denotes | The patient died 12 days after admission. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T331 | 168-172 | UBERON:0000033 | denotes | hest |
| T332 | 203-258 | UBERON:0002037 | denotes | areas of ground-glass opacity with both central and per |
| T333 | 590-664 | UBERON:0001004 | denotes | raphy showed pulmonary emboli along with new areas of ground-glass opacity |
| T209 | 31-35 | UBERON:0004096 | denotes | ific |
| T210 | 164-174 | UBERON:0001016 | denotes | al chest C |
| T211 | 202-206 | UBERON:0000033 | denotes | are |
| T212 | 216-221 | UBERON:0000955 | denotes | nd-gl |
| T213 | 302-317 | UBERON:0001636 | denotes | dependant conso |
| T214 | 331-335 | GO:0016265 | denotes | area |
| T215 | 361-371 | GO:0016265 | denotes | (Fig. 1-1A |
| T216 | 439-443 | UBERON:0002048 | denotes | y su |
| T217 | 444-450 | UBERON:0000479 | denotes | port a |
| T81145 | 514-526 | CL:0000057 | denotes | rapy was ini |
| T219 | 553-560 | UBERON:0003215 | denotes | echanic |
| T220 | 578-589 | CL:0000235 | denotes | st CT-angio |
| T221 | 624-628 | UBERON:0002048 | denotes | g wi |
| T222 | 629-635 | UBERON:0000479 | denotes | h new |
| T223 | 721-729 | UBERON:0003215 | denotes | ir-bronc |
| T224 | 782-797 | UBERON:0001981 | denotes | out by bronchi |
| T225 | 805-813 | UBERON:0003215 | denotes | re. Pati |
| T226 | 814-819 | UBERON:0003037 | denotes | nt's |
| T28263 | 856-864 | UBERON:0010210 | denotes | head re |
| T40605 | 883-889 | UBERON:0000055 | denotes | ia due |
| T229 | 955-964 | UBERON:0000483 | denotes | r cerebra |
| T34853 | 994-1003 | SP_7 | denotes | days afte |