PMC:7340597 / 11336-12573
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T53 | 341-346 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T54 | 418-423 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
| T55 | 482-487 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T56 | 547-552 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T57 | 679-683 | Body_part | denotes | dens | http://purl.org/sig/ont/fma/fma24043 |
| T58 | 748-753 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T22 | 341-346 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T23 | 418-423 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T24 | 482-487 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T25 | 547-552 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 330 | 455-462 | Species | denotes | patient | Tax:9606 |
| 331 | 679-683 | Chemical | denotes | dens | MESH:D004052 |
| 334 | 100-108 | Species | denotes | patients | Tax:9606 |
| 335 | 380-388 | Species | denotes | patients | Tax:9606 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T121 | 798-812 | Disease | denotes | bronchiectasis | http://purl.obolibrary.org/obo/MONDO_0004822 |
| T122 | 953-967 | Disease | denotes | bronchiectasis | http://purl.obolibrary.org/obo/MONDO_0004822 |
| T123 | 1222-1236 | Disease | denotes | bronchiectasis | http://purl.obolibrary.org/obo/MONDO_0004822 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T84 | 341-346 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T85 | 418-423 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
| T86 | 469-470 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T87 | 482-487 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T88 | 520-521 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T89 | 547-552 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T90 | 733-735 | http://purl.obolibrary.org/obo/CLO_0001236 | denotes | 2A |
| T91 | 748-753 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T27 | 798-812 | Phenotype | denotes | bronchiectasis | http://purl.obolibrary.org/obo/HP_0002110 |
| T28 | 944-967 | Phenotype | denotes | traction bronchiectasis | http://purl.obolibrary.org/obo/HP_0032969 |
| T29 | 1222-1236 | Phenotype | denotes | bronchiectasis | http://purl.obolibrary.org/obo/HP_0002110 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T91 | 0-163 | Sentence | denotes | To further investigate histopathologic findings we now present the detailed clinical course of four patients with four different histopathological characteristics. |
| T92 | 164-340 | Sentence | denotes | Because of complexity and importance of the distinct patterns and their relation with radiologic findings and treatment, we preferred to discuss them separately in more detail. |
| T93 | 341-410 | Sentence | denotes | Chest CT imaging of the four discussed patients are shown in Fig. 1 . |
| T94 | 411-445 | Sentence | denotes | Fig. 1 Chest CT scans of case 1–4. |
| T95 | 446-584 | Sentence | denotes | For each patient image A represents chest CT at hospital admission, image B follow up CT-scan (note: chest CT of case 4 was not repeated). |
| T96 | 585-732 | Sentence | denotes | 1A: bilateral areas of GGO, patchy subpleural non-dependant consolidations 1B: progression of dens subpleural consolidations with air-bronchograms. |
| T97 | 733-843 | Sentence | denotes | 2A GGO in both lungs, combined with crazy-paving pattern, subtle bronchiectasis are present in affected areas. |
| T98 | 844-968 | Sentence | denotes | 2B GGO persisted, without progression to consolidations, more pronounced fibrotic reticulation with traction bronchiectasis. |
| T99 | 969-1038 | Sentence | denotes | 3A diffuse bilateral GGO with large gravity dependant consolidations. |
| T100 | 1039-1137 | Sentence | denotes | 3B persistent GGO and consolidation, newly formed cyst-like lesions in middle and ventral regions. |
| T101 | 1138-1237 | Sentence | denotes | 4A bilateral areas of GGO, patchy non-dependant peripheral consolidations with mild bronchiectasis. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T326 | 180-207 | UBERON:0001852 | denotes | exity and importance of the |
| T327 | 329-339 | GO:0015671 | denotes | ore detail |
| T328 | 567-621 | NCBITaxon:746128 | denotes | as not repeated). 1A: bilateral areas of GGO, patchy s |
| T329 | 669-730 | NCBITaxon:1352 | denotes | ession of dens subpleural consolidations with air-bronchogram |
| T330 | 885-905 | UBERON:0002048 | denotes | consolidations, more |
| T201 | 20-24 | UBERON:0004096 | denotes | te h |
| T202 | 91-96 | UBERON:0000170 | denotes | of f |
| T203 | 780-785 | UBERON:0001443 | denotes | g pat |
| T15177 | 902-912 | UBERON:0002106 | denotes | ore pronou |
| T205 | 1086-1091 | UBERON:0002113 | denotes | ed cy |
| T36509 | 1110-1115 | UBERON:0002113 | denotes | middl |
| T207 | 1192-1197 | UBERON:0001443 | denotes | eral |
| T30186 | 1220-1231 | UBERON:0002048 | denotes | d bronchiec |