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PMC:7335494 / 16638-17523 JSONTXT

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LitCovid_Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T4 578-585 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T128 69-72 Body_part denotes ECM http://purl.org/sig/ont/fma/fma9672
T129 96-103 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T130 133-140 Body_part denotes Lumican http://purl.org/sig/ont/fma/fma82827
T131 187-195 Body_part denotes collagen http://purl.org/sig/ont/fma/fma63891
T132 303-310 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T133 393-400 Body_part denotes lumican http://purl.org/sig/ont/fma/fma82827
T134 438-452 Body_part denotes adipose tissue http://purl.org/sig/ont/fma/fma20110
T135 509-512 Body_part denotes ECM http://purl.org/sig/ont/fma/fma9672
T136 513-520 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T137 521-528 Body_part denotes lumican http://purl.org/sig/ont/fma/fma82827
T138 569-572 Body_part denotes ECM http://purl.org/sig/ont/fma/fma9672
T139 578-585 Body_part denotes glucose http://purl.org/sig/ont/fma/fma82743
T140 663-666 Body_part denotes ECM http://purl.org/sig/ont/fma/fma9672
T141 667-679 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T142 705-719 Body_part denotes adipose tissue http://purl.org/sig/ont/fma/fma20110
T143 720-731 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T144 765-779 Body_part denotes adipose tissue http://purl.org/sig/ont/fma/fma20110
T145 822-829 Body_part denotes insulin http://purl.org/sig/ont/fma/fma83365
T146 882-885 Body_part denotes ECM http://purl.org/sig/ont/fma/fma9672

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T37 438-452 Body_part denotes adipose tissue http://purl.obolibrary.org/obo/UBERON_0001013
T38 446-452 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T39 705-719 Body_part denotes adipose tissue http://purl.obolibrary.org/obo/UBERON_0001013
T40 713-719 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T41 765-779 Body_part denotes adipose tissue http://purl.obolibrary.org/obo/UBERON_0001013
T42 773-779 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T64 284-291 Disease denotes obesity http://purl.obolibrary.org/obo/MONDO_0011122
T65 453-465 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T66 606-624 Disease denotes metabolic syndrome http://purl.obolibrary.org/obo/MONDO_0004955
T67 780-792 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T162 89-92 http://purl.obolibrary.org/obo/UBERON_0001013 denotes fat
T163 96-103 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin
T164 171-183 http://purl.obolibrary.org/obo/OBI_0000245 denotes organization
T165 187-195 http://purl.obolibrary.org/obo/CHEBI_3815 denotes collagen
T166 303-310 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin
T167 350-351 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T168 438-452 http://purl.obolibrary.org/obo/UBERON_0001013 denotes adipose tissue
T169 540-541 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T170 647-658 http://purl.obolibrary.org/obo/PR_000015561 denotes Osteopontin
T171 705-719 http://purl.obolibrary.org/obo/UBERON_0001013 denotes adipose tissue
T172 765-779 http://purl.obolibrary.org/obo/UBERON_0001013 denotes adipose tissue
T173 822-829 http://purl.obolibrary.org/obo/PR_000009054 denotes insulin

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T148 96-103 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810
T149 303-310 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810
T150 513-520 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T151 578-585 Chemical denotes glucose http://purl.obolibrary.org/obo/CHEBI_17234|http://purl.obolibrary.org/obo/CHEBI_4167
T153 667-679 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T154 822-829 Chemical denotes insulin http://purl.obolibrary.org/obo/CHEBI_145810

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T81 211-223 http://purl.obolibrary.org/obo/GO_0060612 denotes adipogenesis
T82 211-223 http://purl.obolibrary.org/obo/GO_0045444 denotes adipogenesis
T83 453-465 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T84 578-597 http://purl.obolibrary.org/obo/GO_0042593 denotes glucose homeostasis
T85 586-597 http://purl.obolibrary.org/obo/GO_0042592 denotes homeostasis
T86 780-792 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T76 133-349 Sentence denotes Lumican was demonstrated to alter the organization of collagen I, dysregulate adipogenesis and trigger oxidative stress, facilitating the pathology of obesity-associated insulin resistance (Guzman-Ruiz et al., 2020).
T77 350-466 Sentence denotes A separate study showed that the effect of lumican was diet-dependent and correlated to adipose tissue inflammation.
T78 467-646 Sentence denotes Indeed, the same authors suggest that the ECM protein lumican could pose a convergent point among the ECM, the glucose homeostasis and the metabolic syndrome (Wolff et al., 2019).
T79 647-863 Sentence denotes Osteopontin, an ECM glycoprotein, excessively secreted by adipose tissue macrophages (Nomiyama et al., 2007) enhances adipose tissue inflammation and facilitates the onset of insulin resistance (Aouadi et al., 2013).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T38 96-113 Phenotype denotes insulin resistant http://purl.obolibrary.org/obo/HP_0000855
T39 236-252 Phenotype denotes oxidative stress http://purl.obolibrary.org/obo/HP_0025464
T40 284-291 Phenotype denotes obesity http://purl.obolibrary.org/obo/HP_0001513
T41 303-321 Phenotype denotes insulin resistance http://purl.obolibrary.org/obo/HP_0000855
T42 822-840 Phenotype denotes insulin resistance http://purl.obolibrary.org/obo/HP_0000855

MyTest

Id Subject Object Predicate Lexical cue
32640331-32293066-30720760 343-347 32293066 denotes 2020
32640331-30409703-30720761 640-644 30409703 denotes 2019
32640331-17823662-30720762 750-754 17823662 denotes 2007
32640331-23630254-30720763 857-861 23630254 denotes 2013

2_test

Id Subject Object Predicate Lexical cue
32640331-32293066-30720760 343-347 32293066 denotes 2020
32640331-30409703-30720761 640-644 30409703 denotes 2019
32640331-17823662-30720762 750-754 17823662 denotes 2007
32640331-23630254-30720763 857-861 23630254 denotes 2013

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T330 52-65 GO:0010467 denotes overexpressed
T331 69-72 GO:0044420 denotes ECM
T332 76-88 UBERON:0002190 denotes subcutaneous
T333 89-92 UBERON:0001013 denotes fat
T334 96-103 PR:000009054 denotes insulin
T335 120-131 NCBITaxon:1 denotes individuals
T336 199-210 GO:0065007 denotes dysregulate
T337 211-223 GO:0060612 denotes adipogenesis
T338 236-245 MOP:0000568 denotes oxidative
T339 303-310 PR:000009054 denotes insulin
T340 438-452 UBERON:0001013 denotes adipose tissue
T341 509-512 GO:0044420 denotes ECM
T342 569-572 GO:0044420 denotes ECM
T343 578-585 CHEBI:17234;CHEBI:17234;GO:0042593 denotes glucose
T344 586-597 GO:0042593 denotes homeostasis
T345 606-615 GO:0008152 denotes metabolic
T346 647-658 PR:000015561 denotes Osteopontin
T347 663-666 GO:0044420 denotes ECM
T348 667-679 CHEBI:17089;BV_11;CHEBI:17089 denotes glycoprotein
T349 693-701 GO:0046903 denotes secreted
T350 705-719 UBERON:0001013 denotes adipose tissue
T351 720-731 CL:0000235 denotes macrophages
T352 765-779 UBERON:0001013 denotes adipose tissue
T353 822-829 PR:000009054 denotes insulin