PMC:7323532 / 453-1125
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 101-105 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T2 | 154-162 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T3 | 230-234 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T4 | 235-241 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T5 | 532-538 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 101-105 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T2 | 230-234 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T3 | 235-241 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T4 | 532-538 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T12 | 23-70 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T13 | 23-56 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T14 | 72-80 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T15 | 264-274 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
T16 | 338-346 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T17 | 411-419 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T18 | 458-495 | Disease | denotes | chronic obstructive pulmonary disease | http://purl.obolibrary.org/obo/MONDO_0005002 |
T19 | 478-495 | Disease | denotes | pulmonary disease | http://purl.obolibrary.org/obo/MONDO_0005275 |
T20 | 497-509 | Disease | denotes | hypertension | http://purl.obolibrary.org/obo/MONDO_0005044 |
T21 | 511-519 | Disease | denotes | diabetes | http://purl.obolibrary.org/obo/MONDO_0005015 |
T22 | 524-546 | Disease | denotes | chronic kidney disease | http://purl.obolibrary.org/obo/MONDO_0005300 |
T23 | 532-546 | Disease | denotes | kidney disease | http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240 |
T25 | 654-671 | Disease | denotes | fungal infections | http://purl.obolibrary.org/obo/MONDO_0002041 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3 | 101-105 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T4 | 101-105 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T5 | 230-234 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T6 | 230-234 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T7 | 282-283 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T8 | 532-538 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T9 | 532-538 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T10 | 532-538 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
33 | 0-8 | Species | denotes | Patients | Tax:9606 |
34 | 23-70 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
35 | 72-82 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
36 | 374-382 | Species | denotes | patients | Tax:9606 |
37 | 9-17 | Disease | denotes | infected | MESH:D007239 |
38 | 101-112 | Disease | denotes | lung damage | MESH:D008171 |
39 | 264-274 | Disease | denotes | infections | MESH:D007239 |
40 | 317-336 | Disease | denotes | coronavirus disease | MESH:D018352 |
41 | 338-346 | Disease | denotes | COVID-19 | MESH:C000657245 |
42 | 411-419 | Disease | denotes | COVID-19 | MESH:C000657245 |
43 | 458-495 | Disease | denotes | chronic obstructive pulmonary disease | MESH:D029424 |
44 | 497-509 | Disease | denotes | hypertension | MESH:D006973 |
45 | 511-519 | Disease | denotes | diabetes | MESH:D003920 |
46 | 524-546 | Disease | denotes | chronic kidney disease | MESH:D051436 |
47 | 654-671 | Disease | denotes | fungal infections | MESH:D009181 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 120-137 | http://purl.obolibrary.org/obo/GO_0019079 | denotes | viral replication |
T2 | 120-137 | http://purl.obolibrary.org/obo/GO_0019058 | denotes | viral replication |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T6 | 154-168 | Phenotype | denotes | cytokine storm | http://purl.obolibrary.org/obo/HP_0033041 |
T7 | 458-495 | Phenotype | denotes | chronic obstructive pulmonary disease | http://purl.obolibrary.org/obo/HP_0006510 |
T8 | 497-509 | Phenotype | denotes | hypertension | http://purl.obolibrary.org/obo/HP_0000822 |
T9 | 524-546 | Phenotype | denotes | chronic kidney disease | http://purl.obolibrary.org/obo/HP_0012622 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6 | 0-208 | Sentence | denotes | Patients infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) experience major lung damage due to viral replication and the ensuing cytokine storm and complex inflammatory processes (1). |
T7 | 209-352 | Sentence | denotes | The severe damage to lung tissue can lead to secondary infections within a median of 17 days after onset of coronavirus disease (COVID-19) (2). |
T8 | 353-672 | Sentence | denotes | Most immunocompetent patients who develop severe forms of COVID-19 have >1 underlying condition, such as chronic obstructive pulmonary disease, hypertension, diabetes, or chronic kidney disease (3), but none of these predisposing factors generally are associated with an increased risk for developing fungal infections. |