PMC:7321036 / 95085-96154 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T680","span":{"begin":27,"end":32},"obj":"Body_part"},{"id":"T681","span":{"begin":55,"end":64},"obj":"Body_part"},{"id":"T682","span":{"begin":65,"end":75},"obj":"Body_part"},{"id":"T683","span":{"begin":198,"end":203},"obj":"Body_part"},{"id":"T684","span":{"begin":204,"end":211},"obj":"Body_part"},{"id":"T685","span":{"begin":323,"end":327},"obj":"Body_part"},{"id":"T686","span":{"begin":330,"end":334},"obj":"Body_part"},{"id":"T687","span":{"begin":412,"end":415},"obj":"Body_part"},{"id":"T688","span":{"begin":485,"end":493},"obj":"Body_part"},{"id":"T689","span":{"begin":522,"end":530},"obj":"Body_part"},{"id":"T690","span":{"begin":676,"end":684},"obj":"Body_part"}],"attributes":[{"id":"A680","pred":"fma_id","subj":"T680","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A681","pred":"fma_id","subj":"T681","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A682","pred":"fma_id","subj":"T682","obj":"http://purl.org/sig/ont/fma/fma241981"},{"id":"A683","pred":"fma_id","subj":"T683","obj":"http://purl.org/sig/ont/fma/fma241992"},{"id":"A684","pred":"fma_id","subj":"T684","obj":"http://purl.org/sig/ont/fma/fma241992"},{"id":"A685","pred":"fma_id","subj":"T685","obj":"http://purl.org/sig/ont/fma/fma86583"},{"id":"A686","pred":"fma_id","subj":"T686","obj":"http://purl.org/sig/ont/fma/fma86583"},{"id":"A687","pred":"fma_id","subj":"T687","obj":"http://purl.org/sig/ont/fma/fma20935"},{"id":"A688","pred":"fma_id","subj":"T688","obj":"http://purl.org/sig/ont/fma/fma84050"},{"id":"A689","pred":"fma_id","subj":"T689","obj":"http://purl.org/sig/ont/fma/fma62871"},{"id":"A690","pred":"fma_id","subj":"T690","obj":"http://purl.org/sig/ont/fma/fma84050"}],"text":"Supernatants from infected cells were evaluated for 34 cytokines/chemokines by multiplex ELISA for the following analytes: CCL2/MCP-1, CCL3/MIP-1α, CCL4/MIP-1β, CCL5/RANTES, CCL7/MCP-3, CCL8/MCP-2, CCL11/Eotaxin, CCL13/MCP-4, CCL20/MIP-3α, CXCL1/GROα, CXCL2/GROβ, CXCL5/ENA-78, CXCL8/IL-8, CXCL9/MIG, CXCL10/IP-10, CXCL16, IL-1α, IL-1β, IL-1RA, IL-4, IL-6, IL-7, IL-10, IL-12p70, IL-15, IL-16, IL-17A, IL-22, GM-CSF, MMP-9, S100A8, TNFα, TGFβ, and Trappin-2/Elafin. All antibodies and cytokine standards were purchased as antibody pairs from R\u0026D Systems (Minneapolis, MN) or Peprotech (Rocky Hill, NJ). Individual magnetic Luminex bead sets (Luminex Corp, CA) were coupled to cytokine-specific capture antibodies according to the manufacturer’s recommendations. Samples were analyzed on a Luminex MAGPIX platform and quantified using a standard curve. For each bead region, \u003e 50 beads were collected per analyte. The median fluorescence intensity of these beads was recorded for each bead and was used for analysis using a custom R script and a 5P regression algorithm."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T1295","span":{"begin":27,"end":32},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T28393","span":{"begin":52,"end":54},"obj":"http://purl.obolibrary.org/obo/CLO_0001302"},{"id":"T1297","span":{"begin":284,"end":288},"obj":"http://purl.obolibrary.org/obo/CLO_0053704"},{"id":"T1298","span":{"begin":387,"end":392},"obj":"http://purl.obolibrary.org/obo/CLO_0053703"},{"id":"T1299","span":{"begin":405,"end":407},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T1300","span":{"begin":542,"end":545},"obj":"http://purl.obolibrary.org/obo/CLO_0008693"},{"id":"T1301","span":{"begin":542,"end":545},"obj":"http://purl.obolibrary.org/obo/CLO_0008770"},{"id":"T1302","span":{"begin":787,"end":788},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T1303","span":{"begin":834,"end":835},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T1304","span":{"begin":1021,"end":1022},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T1305","span":{"begin":1043,"end":1044},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"Supernatants from infected cells were evaluated for 34 cytokines/chemokines by multiplex ELISA for the following analytes: CCL2/MCP-1, CCL3/MIP-1α, CCL4/MIP-1β, CCL5/RANTES, CCL7/MCP-3, CCL8/MCP-2, CCL11/Eotaxin, CCL13/MCP-4, CCL20/MIP-3α, CXCL1/GROα, CXCL2/GROβ, CXCL5/ENA-78, CXCL8/IL-8, CXCL9/MIG, CXCL10/IP-10, CXCL16, IL-1α, IL-1β, IL-1RA, IL-4, IL-6, IL-7, IL-10, IL-12p70, IL-15, IL-16, IL-17A, IL-22, GM-CSF, MMP-9, S100A8, TNFα, TGFβ, and Trappin-2/Elafin. All antibodies and cytokine standards were purchased as antibody pairs from R\u0026D Systems (Minneapolis, MN) or Peprotech (Rocky Hill, NJ). Individual magnetic Luminex bead sets (Luminex Corp, CA) were coupled to cytokine-specific capture antibodies according to the manufacturer’s recommendations. Samples were analyzed on a Luminex MAGPIX platform and quantified using a standard curve. For each bead region, \u003e 50 beads were collected per analyte. The median fluorescence intensity of these beads was recorded for each bead and was used for analysis using a custom R script and a 5P regression algorithm."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T562","span":{"begin":128,"end":131},"obj":"Chemical"},{"id":"T564","span":{"begin":174,"end":178},"obj":"Chemical"},{"id":"T565","span":{"begin":179,"end":182},"obj":"Chemical"},{"id":"T567","span":{"begin":191,"end":194},"obj":"Chemical"},{"id":"T569","span":{"begin":219,"end":222},"obj":"Chemical"},{"id":"T571","span":{"begin":232,"end":237},"obj":"Chemical"},{"id":"T572","span":{"begin":264,"end":269},"obj":"Chemical"},{"id":"T573","span":{"begin":284,"end":286},"obj":"Chemical"},{"id":"T575","span":{"begin":290,"end":295},"obj":"Chemical"},{"id":"T576","span":{"begin":301,"end":307},"obj":"Chemical"},{"id":"T577","span":{"begin":308,"end":313},"obj":"Chemical"},{"id":"T578","span":{"begin":308,"end":310},"obj":"Chemical"},{"id":"T579","span":{"begin":323,"end":325},"obj":"Chemical"},{"id":"T581","span":{"begin":330,"end":332},"obj":"Chemical"},{"id":"T583","span":{"begin":337,"end":339},"obj":"Chemical"},{"id":"T585","span":{"begin":345,"end":347},"obj":"Chemical"},{"id":"T587","span":{"begin":351,"end":353},"obj":"Chemical"},{"id":"T589","span":{"begin":357,"end":359},"obj":"Chemical"},{"id":"T591","span":{"begin":363,"end":365},"obj":"Chemical"},{"id":"T593","span":{"begin":370,"end":372},"obj":"Chemical"},{"id":"T595","span":{"begin":380,"end":382},"obj":"Chemical"},{"id":"T597","span":{"begin":387,"end":389},"obj":"Chemical"},{"id":"T599","span":{"begin":394,"end":396},"obj":"Chemical"},{"id":"T601","span":{"begin":402,"end":404},"obj":"Chemical"},{"id":"T603","span":{"begin":409,"end":411},"obj":"Chemical"},{"id":"T604","span":{"begin":417,"end":420},"obj":"Chemical"},{"id":"T606","span":{"begin":568,"end":570},"obj":"Chemical"}],"attributes":[{"id":"A562","pred":"chebi_id","subj":"T562","obj":"http://purl.obolibrary.org/obo/CHEBI_132592"},{"id":"A563","pred":"chebi_id","subj":"T562","obj":"http://purl.obolibrary.org/obo/CHEBI_50099"},{"id":"A564","pred":"chebi_id","subj":"T564","obj":"http://purl.obolibrary.org/obo/CHEBI_138183"},{"id":"A565","pred":"chebi_id","subj":"T565","obj":"http://purl.obolibrary.org/obo/CHEBI_132592"},{"id":"A566","pred":"chebi_id","subj":"T565","obj":"http://purl.obolibrary.org/obo/CHEBI_50099"},{"id":"A567","pred":"chebi_id","subj":"T567","obj":"http://purl.obolibrary.org/obo/CHEBI_132592"},{"id":"A568","pred":"chebi_id","subj":"T567","obj":"http://purl.obolibrary.org/obo/CHEBI_50099"},{"id":"A569","pred":"chebi_id","subj":"T569","obj":"http://purl.obolibrary.org/obo/CHEBI_132592"},{"id":"A570","pred":"chebi_id","subj":"T569","obj":"http://purl.obolibrary.org/obo/CHEBI_50099"},{"id":"A571","pred":"chebi_id","subj":"T571","obj":"http://purl.obolibrary.org/obo/CHEBI_138161"},{"id":"A572","pred":"chebi_id","subj":"T572","obj":"http://purl.obolibrary.org/obo/CHEBI_138180"},{"id":"A573","pred":"chebi_id","subj":"T573","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A574","pred":"chebi_id","subj":"T573","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A36886","pred":"chebi_id","subj":"T575","obj":"http://purl.obolibrary.org/obo/CHEBI_138154"},{"id":"A576","pred":"chebi_id","subj":"T576","obj":"http://purl.obolibrary.org/obo/CHEBI_138157"},{"id":"A577","pred":"chebi_id","subj":"T577","obj":"http://purl.obolibrary.org/obo/CHEBI_138157"},{"id":"A578","pred":"chebi_id","subj":"T578","obj":"http://purl.obolibrary.org/obo/CHEBI_74076"},{"id":"A579","pred":"chebi_id","subj":"T579","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A580","pred":"chebi_id","subj":"T579","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A581","pred":"chebi_id","subj":"T581","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A582","pred":"chebi_id","subj":"T581","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A583","pred":"chebi_id","subj":"T583","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A584","pred":"chebi_id","subj":"T583","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A585","pred":"chebi_id","subj":"T585","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A586","pred":"chebi_id","subj":"T585","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A587","pred":"chebi_id","subj":"T587","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A588","pred":"chebi_id","subj":"T587","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A589","pred":"chebi_id","subj":"T589","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A590","pred":"chebi_id","subj":"T589","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A591","pred":"chebi_id","subj":"T591","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A592","pred":"chebi_id","subj":"T591","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A593","pred":"chebi_id","subj":"T593","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A594","pred":"chebi_id","subj":"T593","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A595","pred":"chebi_id","subj":"T595","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A596","pred":"chebi_id","subj":"T595","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A597","pred":"chebi_id","subj":"T597","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A598","pred":"chebi_id","subj":"T597","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A599","pred":"chebi_id","subj":"T599","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A600","pred":"chebi_id","subj":"T599","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A601","pred":"chebi_id","subj":"T601","obj":"http://purl.obolibrary.org/obo/CHEBI_63895"},{"id":"A602","pred":"chebi_id","subj":"T601","obj":"http://purl.obolibrary.org/obo/CHEBI_74072"},{"id":"A603","pred":"chebi_id","subj":"T603","obj":"http://purl.obolibrary.org/obo/CHEBI_74120"},{"id":"A604","pred":"chebi_id","subj":"T604","obj":"http://purl.obolibrary.org/obo/CHEBI_340824"},{"id":"A605","pred":"chebi_id","subj":"T604","obj":"http://purl.obolibrary.org/obo/CHEBI_59761"},{"id":"A606","pred":"chebi_id","subj":"T606","obj":"http://purl.obolibrary.org/obo/CHEBI_141442"}],"text":"Supernatants from infected cells were evaluated for 34 cytokines/chemokines by multiplex ELISA for the following analytes: CCL2/MCP-1, CCL3/MIP-1α, CCL4/MIP-1β, CCL5/RANTES, CCL7/MCP-3, CCL8/MCP-2, CCL11/Eotaxin, CCL13/MCP-4, CCL20/MIP-3α, CXCL1/GROα, CXCL2/GROβ, CXCL5/ENA-78, CXCL8/IL-8, CXCL9/MIG, CXCL10/IP-10, CXCL16, IL-1α, IL-1β, IL-1RA, IL-4, IL-6, IL-7, IL-10, IL-12p70, IL-15, IL-16, IL-17A, IL-22, GM-CSF, MMP-9, S100A8, TNFα, TGFβ, and Trappin-2/Elafin. All antibodies and cytokine standards were purchased as antibody pairs from R\u0026D Systems (Minneapolis, MN) or Peprotech (Rocky Hill, NJ). Individual magnetic Luminex bead sets (Luminex Corp, CA) were coupled to cytokine-specific capture antibodies according to the manufacturer’s recommendations. Samples were analyzed on a Luminex MAGPIX platform and quantified using a standard curve. For each bead region, \u003e 50 beads were collected per analyte. The median fluorescence intensity of these beads was recorded for each bead and was used for analysis using a custom R script and a 5P regression algorithm."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T478","span":{"begin":337,"end":343},"obj":"http://purl.obolibrary.org/obo/GO_0005152"}],"text":"Supernatants from infected cells were evaluated for 34 cytokines/chemokines by multiplex ELISA for the following analytes: CCL2/MCP-1, CCL3/MIP-1α, CCL4/MIP-1β, CCL5/RANTES, CCL7/MCP-3, CCL8/MCP-2, CCL11/Eotaxin, CCL13/MCP-4, CCL20/MIP-3α, CXCL1/GROα, CXCL2/GROβ, CXCL5/ENA-78, CXCL8/IL-8, CXCL9/MIG, CXCL10/IP-10, CXCL16, IL-1α, IL-1β, IL-1RA, IL-4, IL-6, IL-7, IL-10, IL-12p70, IL-15, IL-16, IL-17A, IL-22, GM-CSF, MMP-9, S100A8, TNFα, TGFβ, and Trappin-2/Elafin. All antibodies and cytokine standards were purchased as antibody pairs from R\u0026D Systems (Minneapolis, MN) or Peprotech (Rocky Hill, NJ). Individual magnetic Luminex bead sets (Luminex Corp, CA) were coupled to cytokine-specific capture antibodies according to the manufacturer’s recommendations. Samples were analyzed on a Luminex MAGPIX platform and quantified using a standard curve. For each bead region, \u003e 50 beads were collected per analyte. The median fluorescence intensity of these beads was recorded for each bead and was used for analysis using a custom R script and a 5P regression algorithm."}

{"project":"LitCovid-PubTator","denotations":[{"id":"2165","span":{"begin":123,"end":127},"obj":"Gene"},{"id":"2166","span":{"begin":148,"end":152},"obj":"Gene"},{"id":"2167","span":{"begin":153,"end":159},"obj":"Gene"},{"id":"2168","span":{"begin":161,"end":165},"obj":"Gene"},{"id":"2169","span":{"begin":166,"end":172},"obj":"Gene"},{"id":"2170","span":{"begin":174,"end":178},"obj":"Gene"},{"id":"2171","span":{"begin":186,"end":190},"obj":"Gene"},{"id":"2172","span":{"begin":198,"end":203},"obj":"Gene"},{"id":"2173","span":{"begin":204,"end":211},"obj":"Gene"},{"id":"2174","span":{"begin":213,"end":218},"obj":"Gene"},{"id":"2175","span":{"begin":226,"end":231},"obj":"Gene"},{"id":"2176","span":{"begin":232,"end":238},"obj":"Gene"},{"id":"2177","span":{"begin":240,"end":245},"obj":"Gene"},{"id":"2178","span":{"begin":246,"end":250},"obj":"Gene"},{"id":"2179","span":{"begin":252,"end":257},"obj":"Gene"},{"id":"2180","span":{"begin":258,"end":262},"obj":"Gene"},{"id":"2181","span":{"begin":264,"end":269},"obj":"Gene"},{"id":"2182","span":{"begin":270,"end":276},"obj":"Gene"},{"id":"2183","span":{"begin":278,"end":283},"obj":"Gene"},{"id":"2184","span":{"begin":284,"end":288},"obj":"Gene"},{"id":"2185","span":{"begin":290,"end":295},"obj":"Gene"},{"id":"2186","span":{"begin":296,"end":299},"obj":"Gene"},{"id":"2187","span":{"begin":301,"end":307},"obj":"Gene"},{"id":"2188","span":{"begin":308,"end":313},"obj":"Gene"},{"id":"2189","span":{"begin":315,"end":321},"obj":"Gene"},{"id":"2190","span":{"begin":323,"end":328},"obj":"Gene"},{"id":"2191","span":{"begin":330,"end":335},"obj":"Gene"},{"id":"2192","span":{"begin":337,"end":343},"obj":"Gene"},{"id":"2193","span":{"begin":345,"end":349},"obj":"Gene"},{"id":"2194","span":{"begin":351,"end":355},"obj":"Gene"},{"id":"2195","span":{"begin":357,"end":361},"obj":"Gene"},{"id":"2196","span":{"begin":363,"end":368},"obj":"Gene"},{"id":"2197","span":{"begin":380,"end":385},"obj":"Gene"},{"id":"2198","span":{"begin":387,"end":392},"obj":"Gene"},{"id":"2199","span":{"begin":394,"end":400},"obj":"Gene"},{"id":"2200","span":{"begin":402,"end":407},"obj":"Gene"},{"id":"2201","span":{"begin":409,"end":415},"obj":"Gene"},{"id":"2202","span":{"begin":417,"end":422},"obj":"Gene"},{"id":"2203","span":{"begin":424,"end":430},"obj":"Gene"},{"id":"2204","span":{"begin":432,"end":436},"obj":"Gene"},{"id":"2205","span":{"begin":438,"end":442},"obj":"Gene"},{"id":"2206","span":{"begin":448,"end":457},"obj":"Gene"},{"id":"2207","span":{"begin":458,"end":464},"obj":"Gene"},{"id":"2208","span":{"begin":18,"end":26},"obj":"Disease"},{"id":"2209","span":{"begin":568,"end":570},"obj":"CellLine"}],"attributes":[{"id":"A2165","pred":"tao:has_database_id","subj":"2165","obj":"Gene:6347"},{"id":"A2166","pred":"tao:has_database_id","subj":"2166","obj":"Gene:6351"},{"id":"A2167","pred":"tao:has_database_id","subj":"2167","obj":"Gene:6351"},{"id":"A2168","pred":"tao:has_database_id","subj":"2168","obj":"Gene:6352"},{"id":"A2169","pred":"tao:has_database_id","subj":"2169","obj":"Gene:6352"},{"id":"A2170","pred":"tao:has_database_id","subj":"2170","obj":"Gene:6354"},{"id":"A2171","pred":"tao:has_database_id","subj":"2171","obj":"Gene:6355"},{"id":"A2172","pred":"tao:has_database_id","subj":"2172","obj":"Gene:6356"},{"id":"A2173","pred":"tao:has_database_id","subj":"2173","obj":"Gene:6356"},{"id":"A2174","pred":"tao:has_database_id","subj":"2174","obj":"Gene:6357"},{"id":"A2175","pred":"tao:has_database_id","subj":"2175","obj":"Gene:6364"},{"id":"A2176","pred":"tao:has_database_id","subj":"2176","obj":"Gene:6364"},{"id":"A2177","pred":"tao:has_database_id","subj":"2177","obj":"Gene:2919"},{"id":"A2178","pred":"tao:has_database_id","subj":"2178","obj":"Gene:2919"},{"id":"A2179","pred":"tao:has_database_id","subj":"2179","obj":"Gene:2920"},{"id":"A2180","pred":"tao:has_database_id","subj":"2180","obj":"Gene:2919"},{"id":"A2181","pred":"tao:has_database_id","subj":"2181","obj":"Gene:6374"},{"id":"A2182","pred":"tao:has_database_id","subj":"2182","obj":"Gene:6374"},{"id":"A2183","pred":"tao:has_database_id","subj":"2183","obj":"Gene:3576"},{"id":"A2184","pred":"tao:has_database_id","subj":"2184","obj":"Gene:3576"},{"id":"A2185","pred":"tao:has_database_id","subj":"2185","obj":"Gene:4283"},{"id":"A2186","pred":"tao:has_database_id","subj":"2186","obj":"Gene:4283"},{"id":"A2187","pred":"tao:has_database_id","subj":"2187","obj":"Gene:3627"},{"id":"A2188","pred":"tao:has_database_id","subj":"2188","obj":"Gene:3627"},{"id":"A2189","pred":"tao:has_database_id","subj":"2189","obj":"Gene:58191"},{"id":"A2190","pred":"tao:has_database_id","subj":"2190","obj":"Gene:3552"},{"id":"A2191","pred":"tao:has_database_id","subj":"2191","obj":"Gene:3552"},{"id":"A2192","pred":"tao:has_database_id","subj":"2192","obj":"Gene:3557"},{"id":"A2193","pred":"tao:has_database_id","subj":"2193","obj":"Gene:3565"},{"id":"A2194","pred":"tao:has_database_id","subj":"2194","obj":"Gene:3569"},{"id":"A2195","pred":"tao:has_database_id","subj":"2195","obj":"Gene:3574"},{"id":"A2196","pred":"tao:has_database_id","subj":"2196","obj":"Gene:3586"},{"id":"A2197","pred":"tao:has_database_id","subj":"2197","obj":"Gene:3600"},{"id":"A2198","pred":"tao:has_database_id","subj":"2198","obj":"Gene:3603"},{"id":"A2199","pred":"tao:has_database_id","subj":"2199","obj":"Gene:3605"},{"id":"A2200","pred":"tao:has_database_id","subj":"2200","obj":"Gene:50616"},{"id":"A2201","pred":"tao:has_database_id","subj":"2201","obj":"Gene:1437"},{"id":"A2202","pred":"tao:has_database_id","subj":"2202","obj":"Gene:4318"},{"id":"A2203","pred":"tao:has_database_id","subj":"2203","obj":"Gene:6279"},{"id":"A2204","pred":"tao:has_database_id","subj":"2204","obj":"Gene:7124"},{"id":"A2205","pred":"tao:has_database_id","subj":"2205","obj":"Gene:7039"},{"id":"A2206","pred":"tao:has_database_id","subj":"2206","obj":"Gene:5266"},{"id":"A2207","pred":"tao:has_database_id","subj":"2207","obj":"Gene:5266"},{"id":"A2208","pred":"tao:has_database_id","subj":"2208","obj":"MESH:D007239"},{"id":"A2209","pred":"tao:has_database_id","subj":"2209","obj":"CVCL:U508"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Supernatants from infected cells were evaluated for 34 cytokines/chemokines by multiplex ELISA for the following analytes: CCL2/MCP-1, CCL3/MIP-1α, CCL4/MIP-1β, CCL5/RANTES, CCL7/MCP-3, CCL8/MCP-2, CCL11/Eotaxin, CCL13/MCP-4, CCL20/MIP-3α, CXCL1/GROα, CXCL2/GROβ, CXCL5/ENA-78, CXCL8/IL-8, CXCL9/MIG, CXCL10/IP-10, CXCL16, IL-1α, IL-1β, IL-1RA, IL-4, IL-6, IL-7, IL-10, IL-12p70, IL-15, IL-16, IL-17A, IL-22, GM-CSF, MMP-9, S100A8, TNFα, TGFβ, and Trappin-2/Elafin. All antibodies and cytokine standards were purchased as antibody pairs from R\u0026D Systems (Minneapolis, MN) or Peprotech (Rocky Hill, NJ). Individual magnetic Luminex bead sets (Luminex Corp, CA) were coupled to cytokine-specific capture antibodies according to the manufacturer’s recommendations. Samples were analyzed on a Luminex MAGPIX platform and quantified using a standard curve. For each bead region, \u003e 50 beads were collected per analyte. The median fluorescence intensity of these beads was recorded for each bead and was used for analysis using a custom R script and a 5P regression algorithm."}

{"project":"LitCovid-sentences","denotations":[{"id":"T832","span":{"begin":0,"end":465},"obj":"Sentence"},{"id":"T833","span":{"begin":466,"end":602},"obj":"Sentence"},{"id":"T834","span":{"begin":603,"end":761},"obj":"Sentence"},{"id":"T835","span":{"begin":762,"end":851},"obj":"Sentence"},{"id":"T836","span":{"begin":852,"end":912},"obj":"Sentence"},{"id":"T837","span":{"begin":913,"end":1069},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Supernatants from infected cells were evaluated for 34 cytokines/chemokines by multiplex ELISA for the following analytes: CCL2/MCP-1, CCL3/MIP-1α, CCL4/MIP-1β, CCL5/RANTES, CCL7/MCP-3, CCL8/MCP-2, CCL11/Eotaxin, CCL13/MCP-4, CCL20/MIP-3α, CXCL1/GROα, CXCL2/GROβ, CXCL5/ENA-78, CXCL8/IL-8, CXCL9/MIG, CXCL10/IP-10, CXCL16, IL-1α, IL-1β, IL-1RA, IL-4, IL-6, IL-7, IL-10, IL-12p70, IL-15, IL-16, IL-17A, IL-22, GM-CSF, MMP-9, S100A8, TNFα, TGFβ, and Trappin-2/Elafin. All antibodies and cytokine standards were purchased as antibody pairs from R\u0026D Systems (Minneapolis, MN) or Peprotech (Rocky Hill, NJ). Individual magnetic Luminex bead sets (Luminex Corp, CA) were coupled to cytokine-specific capture antibodies according to the manufacturer’s recommendations. Samples were analyzed on a Luminex MAGPIX platform and quantified using a standard curve. For each bead region, \u003e 50 beads were collected per analyte. The median fluorescence intensity of these beads was recorded for each bead and was used for analysis using a custom R script and a 5P regression algorithm."}