PMC:7321036 / 6047-6624
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T141 | 89-99 | SP_7 | denotes | SARS-CoV-2 |
| T142 | 204-214 | SP_7 | denotes | SARS-CoV-2 |
| T143 | 501-512 | NCBITaxon:60711 | denotes | Chlorocebus |
| T144 | 513-520 | NCBITaxon:9606 | denotes | sabaeus |
| T145 | 525-530 | SP_6;NCBITaxon:9606 | denotes | human |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T98643 | 28-32 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T3823 | 135-140 | Body_part | denotes | Cells | http://purl.org/sig/ont/fma/fma68646 |
| T73925 | 434-441 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T29258 | 531-538 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T54 | 89-97 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T55 | 100-109 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T56 | 204-212 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T57 | 215-224 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T58 | 265-274 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T59 | 340-343 | Disease | denotes | DIA | http://purl.obolibrary.org/obo/MONDO_0022963 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T65668 | 28-37 | http://purl.obolibrary.org/obo/CLO_0000031 | denotes | cell line |
| T47731 | 135-140 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cells |
| T96407 | 232-236 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 4, 8 |
| T17213 | 298-299 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T84745 | 308-309 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T21057 | 496-498 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T22948 | 525-538 | http://purl.obolibrary.org/obo/PR_000029067 | denotes | human protein |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T25 | 434-441 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T26 | 531-538 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T44285 | 455-470 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 193 | 501-520 | Species | denotes | Chlorocebus sabaeus | Tax:60711 |
| 194 | 525-530 | Species | denotes | human | Tax:9606 |
| 196 | 89-109 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
| 197 | 204-224 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
| 198 | 265-274 | Disease | denotes | infection | MESH:D007239 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T38 | 23-134 | Sentence | denotes | This cell line was selected because of its high susceptibility to SARS-CoV-2 infection (Harcourt et al., 2020). |
| T39 | 135-301 | Sentence | denotes | Cells were harvested in biological triplicate at 6 time points after SARS-CoV-2 infection (0, 2, 4, 8, 12, or 24 h) or after mock infection at 0 or 24 h (Figure 1 A). |
| T40 | 302-500 | Sentence | denotes | Using a data-independent acquisition (DIA) proteomics approach, each sample was then partitioned and analyzed for changes in global protein abundance or phosphorylation (data available in Table S1). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32645325-25267831-20773042 | 16-20 | 25267831 | denotes | 2014 |
| 32645325-32160149-20773043 | 128-132 | 32160149 | denotes | 2020 |