PMC:7314078 / 12914-14608
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T3 | 447-459 | Body_part | denotes | Aortic valve | http://purl.org/sig/ont/fma/fma7236 |
| T4 | 623-635 | Body_part | denotes | Mitral valve | http://purl.org/sig/ont/fma/fma7235 |
| T5 | 747-763 | Body_part | denotes | papillary muscle | http://purl.org/sig/ont/fma/fma12154 |
| T6 | 895-898 | Body_part | denotes | LAD | http://purl.org/sig/ont/fma/fma3862 |
| T7 | 1222-1227 | Body_part | denotes | Heart | http://purl.org/sig/ont/fma/fma7088 |
| T8 | 1264-1269 | Body_part | denotes | Heart | http://purl.org/sig/ont/fma/fma7088 |
| T9 | 1518-1521 | Body_part | denotes | LAD | http://purl.org/sig/ont/fma/fma3862 |
| T10 | 1565-1580 | Body_part | denotes | coronary artery | http://purl.org/sig/ont/fma/fma49893 |
| T11 | 1635-1640 | Body_part | denotes | Heart | http://purl.org/sig/ont/fma/fma7088 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T3 | 447-459 | Body_part | denotes | Aortic valve | http://purl.obolibrary.org/obo/UBERON_0002137 |
| T4 | 454-459 | Body_part | denotes | valve | http://purl.obolibrary.org/obo/UBERON_0003978 |
| T5 | 623-635 | Body_part | denotes | Mitral valve | http://purl.obolibrary.org/obo/UBERON_0002135 |
| T6 | 630-635 | Body_part | denotes | valve | http://purl.obolibrary.org/obo/UBERON_0003978 |
| T7 | 1163-1168 | Body_part | denotes | valve | http://purl.obolibrary.org/obo/UBERON_0003978 |
| T8 | 1222-1227 | Body_part | denotes | Heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
| T9 | 1264-1269 | Body_part | denotes | Heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
| T10 | 1442-1447 | Body_part | denotes | valve | http://purl.obolibrary.org/obo/UBERON_0003978 |
| T11 | 1565-1580 | Body_part | denotes | coronary artery | http://purl.obolibrary.org/obo/UBERON_0001621 |
| T12 | 1574-1580 | Body_part | denotes | artery | http://purl.obolibrary.org/obo/UBERON_0001637 |
| T13 | 1635-1640 | Body_part | denotes | Heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T73 | 95-103 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T74 | 233-239 | Disease | denotes | stroke | http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057 |
| T76 | 288-303 | Disease | denotes | aortic aneurysm | http://purl.obolibrary.org/obo/MONDO_0005160 |
| T77 | 320-335 | Disease | denotes | aortic aneurysm | http://purl.obolibrary.org/obo/MONDO_0005160 |
| T78 | 349-364 | Disease | denotes | Marfan syndrome | http://purl.obolibrary.org/obo/MONDO_0007947 |
| T79 | 371-385 | Disease | denotes | collagenopathy | http://purl.obolibrary.org/obo/MONDO_0004603 |
| T80 | 434-446 | Disease | denotes | hypertension | http://purl.obolibrary.org/obo/MONDO_0005044 |
| T81 | 468-483 | Disease | denotes | aortic stenosis | http://purl.obolibrary.org/obo/MONDO_0004978|http://purl.obolibrary.org/obo/MONDO_0042981 |
| T83 | 555-575 | Disease | denotes | aortic regurgitation | http://purl.obolibrary.org/obo/MONDO_0005648 |
| T84 | 644-659 | Disease | denotes | mitral stenosis | http://purl.obolibrary.org/obo/MONDO_0005852 |
| T85 | 719-739 | Disease | denotes | mitral insufficiency | http://purl.obolibrary.org/obo/MONDO_0001298 |
| T86 | 831-846 | Disease | denotes | Unstable angina | http://purl.obolibrary.org/obo/MONDO_0006805 |
| T87 | 895-898 | Disease | denotes | LAD | http://purl.obolibrary.org/obo/MONDO_0017570 |
| T88 | 963-978 | Disease | denotes | cardiac rupture | http://purl.obolibrary.org/obo/MONDO_0020983 |
| T89 | 985-997 | Disease | denotes | endocarditis | http://purl.obolibrary.org/obo/MONDO_0005025 |
| T90 | 1222-1235 | Disease | denotes | Heart failure | http://purl.obolibrary.org/obo/MONDO_0005252 |
| T91 | 1264-1277 | Disease | denotes | Heart failure | http://purl.obolibrary.org/obo/MONDO_0005252 |
| T92 | 1336-1353 | Disease | denotes | Cardiac tamponade | http://purl.obolibrary.org/obo/MONDO_0001297 |
| T93 | 1361-1367 | Disease | denotes | myxoma | http://purl.obolibrary.org/obo/MONDO_0044784 |
| T94 | 1482-1490 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T95 | 1492-1516 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T96 | 1518-1521 | Disease | denotes | LAD | http://purl.obolibrary.org/obo/MONDO_0017570 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T93 | 119-125 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | aortic |
| T94 | 142-148 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | aortic |
| T95 | 288-294 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | aortic |
| T96 | 320-326 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | aortic |
| T97 | 447-453 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | Aortic |
| T98 | 454-459 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | valve |
| T99 | 468-474 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | aortic |
| T100 | 555-561 | http://www.ebi.ac.uk/efo/EFO_0000265 | denotes | aortic |
| T101 | 630-635 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | valve |
| T102 | 757-763 | http://purl.obolibrary.org/obo/UBERON_0001630 | denotes | muscle |
| T103 | 757-763 | http://purl.obolibrary.org/obo/UBERON_0005090 | denotes | muscle |
| T104 | 757-763 | http://www.ebi.ac.uk/efo/EFO_0000801 | denotes | muscle |
| T105 | 757-763 | http://www.ebi.ac.uk/efo/EFO_0001949 | denotes | muscle |
| T106 | 1163-1168 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | valve |
| T107 | 1222-1227 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | Heart |
| T108 | 1222-1227 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | Heart |
| T109 | 1222-1227 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | Heart |
| T110 | 1222-1227 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | Heart |
| T111 | 1264-1269 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | Heart |
| T112 | 1264-1269 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | Heart |
| T113 | 1264-1269 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | Heart |
| T114 | 1264-1269 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | Heart |
| T115 | 1442-1447 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | valve |
| T116 | 1574-1580 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | artery |
| T117 | 1574-1580 | http://www.ebi.ac.uk/efo/EFO_0000814 | denotes | artery |
| T118 | 1612-1618 | http://purl.obolibrary.org/obo/OBI_0000968 | denotes | device |
| T119 | 1635-1640 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | Heart |
| T120 | 1635-1640 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | Heart |
| T121 | 1635-1640 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | Heart |
| T122 | 1635-1640 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | Heart |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T10 | 544-546 | Chemical | denotes | IV | http://purl.obolibrary.org/obo/CHEBI_74327 |
| T11 | 895-898 | Chemical | denotes | LAD | http://purl.obolibrary.org/obo/CHEBI_73524 |
| T12 | 1439-1441 | Chemical | denotes | AV | http://purl.obolibrary.org/obo/CHEBI_73809 |
| T13 | 1460-1462 | Chemical | denotes | AV | http://purl.obolibrary.org/obo/CHEBI_73809 |
| T14 | 1518-1521 | Chemical | denotes | LAD | http://purl.obolibrary.org/obo/CHEBI_73524 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 233 | 192-200 | Species | denotes | patients | Tax:9606 |
| 234 | 113-134 | Disease | denotes | Acute aortic syndrome | MESH:D000208 |
| 235 | 171-180 | Disease | denotes | haematoma | |
| 236 | 206-210 | Disease | denotes | coma | MESH:D003128 |
| 237 | 233-239 | Disease | denotes | stroke | MESH:D020521 |
| 238 | 288-303 | Disease | denotes | aortic aneurysm | MESH:D001014 |
| 239 | 320-335 | Disease | denotes | aortic aneurysm | MESH:D001014 |
| 240 | 371-397 | Disease | denotes | collagenopathy OR Aneurysm | MESH:C535964 |
| 241 | 434-483 | Disease | denotes | hypertension Aortic valve Severe aortic stenosis | MESH:D001024 |
| 242 | 503-543 | Disease | denotes | lipotimia OR angina OR dyspnoea NYHA III | MESH:D000787 |
| 243 | 555-575 | Disease | denotes | aortic regurgitation | MESH:D001022 |
| 244 | 581-659 | Disease | denotes | Pulmonary oedema Haemodynamic instability Mitral valve Severe mitral stenosis | MESH:D008946 |
| 245 | 665-681 | Disease | denotes | Pulmonary oedema | MESH:D011654 |
| 246 | 719-739 | Disease | denotes | mitral insufficiency | MESH:D008944 |
| 247 | 764-779 | Disease | denotes | chordal rupture | MESH:D012421 |
| 248 | 791-867 | Disease | denotes | pulmonary oedema Ischaemic cardiopathy Unstable angina Severe LMCA stenosis | MESH:D011654 |
| 249 | 873-907 | Disease | denotes | Subocclusive proximal LAD stenosis | MESH:C535887 |
| 250 | 925-962 | Disease | denotes | PCI Postinfarction ventricular septal | MESH:D006345 |
| 251 | 963-997 | Disease | denotes | cardiac rupture Acute endocarditis | MESH:D006341 |
| 252 | 1163-1180 | Disease | denotes | valve dysfunction | MESH:D006349 |
| 253 | 1222-1277 | Disease | denotes | Heart failure OR Haemodynamic instability Heart failure | MESH:D006333 |
| 254 | 1303-1367 | Disease | denotes | LVAD implantation Miscellaneous Cardiac tamponade Atrial myxoma | MESH:D006331 |
| 255 | 1377-1392 | Disease | denotes | cardiac tumours | MESH:D006338 |
| 256 | 1399-1411 | Disease | denotes | High embolic | MESH:D004617 |
| 257 | 1439-1459 | Disease | denotes | AV valve obstruction | MESH:D054537 |
| 259 | 95-103 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 262 | 1464-1480 | Disease | denotes | atrioventricular | MESH:D054537 |
| 263 | 1492-1516 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T113 | 0-8 | Sentence | denotes | Table 2: |
| T114 | 10-112 | Sentence | denotes | Definitions of emergency/urgent cardiac surgery cases adopted in Lombardy during the COVID-19 outbreak |
| T115 | 113-277 | Sentence | denotes | Acute aortic syndrome Acute aortic dissection/intramural haematoma (excluding patients with coma OR age >80 years with stroke and/or evident visceral malperfusion) |
| T116 | 278-309 | Sentence | denotes | Ascending aortic aneurysm ≥6 cm |
| T117 | 310-348 | Sentence | denotes | Ascending aortic aneurysm ≥5.5 cm AND: |
| T118 | 349-388 | Sentence | denotes | Marfan syndrome/other collagenopathy OR |
| T119 | 389-420 | Sentence | denotes | Aneurysm increase >5 mm/year OR |
| T120 | 421-446 | Sentence | denotes | Uncontrolled hypertension |
| T121 | 447-547 | Sentence | denotes | Aortic valve Severe aortic stenosis AND symptoms (i.e. lipotimia OR angina OR dyspnoea NYHA III/IV) |
| T122 | 548-580 | Sentence | denotes | Severe aortic regurgitation AND: |
| T123 | 581-597 | Sentence | denotes | Pulmonary oedema |
| T124 | 598-622 | Sentence | denotes | Haemodynamic instability |
| T125 | 623-664 | Sentence | denotes | Mitral valve Severe mitral stenosis AND: |
| T126 | 665-684 | Sentence | denotes | Pulmonary oedema OR |
| T127 | 685-709 | Sentence | denotes | Haemodynamic instability |
| T128 | 710-712 | Sentence | denotes | 2. |
| T129 | 713-807 | Sentence | denotes | Acute mitral insufficiency due to papillary muscle/chordal rupture leading to pulmonary oedema |
| T130 | 808-846 | Sentence | denotes | Ischaemic cardiopathy Unstable angina |
| T131 | 847-872 | Sentence | denotes | Severe LMCA stenosis ≥70% |
| T132 | 873-928 | Sentence | denotes | Subocclusive proximal LAD stenosis not suitable for PCI |
| T133 | 929-978 | Sentence | denotes | Postinfarction ventricular septal/cardiac rupture |
| T134 | 979-1130 | Sentence | denotes | Acute endocarditis Emergency or urgent cases (as defined by European Society of Cardiology/European Association of Cardio-Thoracic Surgery Guidelines) |
| T135 | 1131-1221 | Sentence | denotes | Severe bioprosthetic/mechanical valve dysfunction Emergency or urgent cases resulting in: |
| T136 | 1222-1238 | Sentence | denotes | Heart failure OR |
| T137 | 1239-1263 | Sentence | denotes | Haemodynamic instability |
| T138 | 1264-1320 | Sentence | denotes | Heart failure Non-deferrable need for LVAD implantation |
| T139 | 1321-1353 | Sentence | denotes | Miscellaneous Cardiac tamponade |
| T140 | 1354-1398 | Sentence | denotes | Atrial myxoma OR other cardiac tumours with: |
| T141 | 1399-1419 | Sentence | denotes | High embolic risk OR |
| T142 | 1420-1459 | Sentence | denotes | In the presence of AV valve obstruction |
| T143 | 1460-1625 | Sentence | denotes | AV: atrioventricular; COVID-19: coronavirus disease 2019; LAD: left anterior descending; LMCA: left main coronary artery; LVAD: left ventricular assist device; NYHA: |
| T144 | 1626-1694 | Sentence | denotes | New York Heart Association; PCI: percutaneous coronary intervention. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T17 | 142-159 | Phenotype | denotes | aortic dissection | http://purl.obolibrary.org/obo/HP_0002647 |
| T18 | 206-210 | Phenotype | denotes | coma | http://purl.obolibrary.org/obo/HP_0001259 |
| T19 | 233-239 | Phenotype | denotes | stroke | http://purl.obolibrary.org/obo/HP_0001297 |
| T20 | 278-303 | Phenotype | denotes | Ascending aortic aneurysm | http://purl.obolibrary.org/obo/HP_0004970 |
| T21 | 310-335 | Phenotype | denotes | Ascending aortic aneurysm | http://purl.obolibrary.org/obo/HP_0004970 |
| T22 | 389-397 | Phenotype | denotes | Aneurysm | http://purl.obolibrary.org/obo/HP_0002617 |
| T23 | 434-446 | Phenotype | denotes | hypertension | http://purl.obolibrary.org/obo/HP_0000822 |
| T24 | 468-483 | Phenotype | denotes | aortic stenosis | http://purl.obolibrary.org/obo/HP_0001650 |
| T25 | 526-534 | Phenotype | denotes | dyspnoea | http://purl.obolibrary.org/obo/HP_0002094 |
| T26 | 555-575 | Phenotype | denotes | aortic regurgitation | http://purl.obolibrary.org/obo/HP_0001659 |
| T27 | 581-597 | Phenotype | denotes | Pulmonary oedema | http://purl.obolibrary.org/obo/HP_0100598 |
| T28 | 644-659 | Phenotype | denotes | mitral stenosis | http://purl.obolibrary.org/obo/HP_0001718 |
| T29 | 665-681 | Phenotype | denotes | Pulmonary oedema | http://purl.obolibrary.org/obo/HP_0100598 |
| T30 | 719-739 | Phenotype | denotes | mitral insufficiency | http://purl.obolibrary.org/obo/HP_0001653 |
| T31 | 791-807 | Phenotype | denotes | pulmonary oedema | http://purl.obolibrary.org/obo/HP_0100598 |
| T32 | 985-997 | Phenotype | denotes | endocarditis | http://purl.obolibrary.org/obo/HP_0100584 |
| T33 | 1222-1235 | Phenotype | denotes | Heart failure | http://purl.obolibrary.org/obo/HP_0001635 |
| T34 | 1264-1277 | Phenotype | denotes | Heart failure | http://purl.obolibrary.org/obo/HP_0001635 |
testtesttest
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T17 | 447-459 | Body_part | denotes | Aortic valve | http://purl.obolibrary.org/obo/UBERON_0002137 |
| T18 | 623-635 | Body_part | denotes | Mitral valve | http://purl.obolibrary.org/obo/UBERON_0002135 |
| T19 | 747-763 | Body_part | denotes | papillary muscle | http://purl.obolibrary.org/obo/UBERON_0002494 |
| T20 | 1163-1168 | Body_part | denotes | valve | http://purl.obolibrary.org/obo/UBERON_0003978 |
| T21 | 1222-1227 | Body_part | denotes | Heart | http://purl.obolibrary.org/obo/UBERON_0000948|http://purl.obolibrary.org/obo/UBERON_0007100|http://purl.obolibrary.org/obo/UBERON_0015228|http://purl.obolibrary.org/obo/UBERON_0015230 |
| T25 | 1264-1269 | Body_part | denotes | Heart | http://purl.obolibrary.org/obo/UBERON_0000948|http://purl.obolibrary.org/obo/UBERON_0007100|http://purl.obolibrary.org/obo/UBERON_0015228|http://purl.obolibrary.org/obo/UBERON_0015230 |
| T29 | 1439-1447 | Body_part | denotes | AV valve | http://purl.obolibrary.org/obo/UBERON_0002133 |
| T30 | 1565-1580 | Body_part | denotes | coronary artery | http://purl.obolibrary.org/obo/UBERON_0001621 |
| T31 | 1635-1640 | Body_part | denotes | Heart | http://purl.obolibrary.org/obo/UBERON_0000948|http://purl.obolibrary.org/obo/UBERON_0007100|http://purl.obolibrary.org/obo/UBERON_0015228|http://purl.obolibrary.org/obo/UBERON_0015230 |