PMC:7309518 / 6401-7212
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T27 | 111-126 | Body_part | denotes | lower extremity | http://purl.org/sig/ont/fma/fma7184 |
T28 | 242-248 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
T29 | 308-315 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T30 | 414-417 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
T31 | 434-441 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T32 | 591-602 | Body_part | denotes | nerve roots | http://purl.org/sig/ont/fma/fma5981 |
T33 | 591-596 | Body_part | denotes | nerve | http://purl.org/sig/ont/fma/fma65132 |
T34 | 606-618 | Body_part | denotes | facial nerve | http://purl.org/sig/ont/fma/fma50868 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T13 | 242-248 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
T14 | 591-602 | Body_part | denotes | nerve roots | http://purl.obolibrary.org/obo/UBERON_0002211 |
T15 | 591-596 | Body_part | denotes | nerve | http://purl.obolibrary.org/obo/UBERON_0001021 |
T16 | 606-618 | Body_part | denotes | facial nerve | http://purl.obolibrary.org/obo/UBERON_0001647 |
T17 | 613-618 | Body_part | denotes | nerve | http://purl.obolibrary.org/obo/UBERON_0001021 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T99 | 40-43 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
T100 | 215-222 | Disease | denotes | anosmia | http://purl.obolibrary.org/obo/MONDO_0010528 |
T101 | 237-248 | Disease | denotes | sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
T102 | 272-287 | Disease | denotes | lymphocytopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
T103 | 347-355 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T104 | 401-407 | Disease | denotes | ataxia | http://purl.obolibrary.org/obo/MONDO_0000437 |
T105 | 477-485 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T106 | 549-552 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
T107 | 651-662 | Disease | denotes | tetraplegia | http://purl.obolibrary.org/obo/MONDO_0001590 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T41 | 6-9 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T42 | 117-126 | http://www.ebi.ac.uk/efo/EFO_0000876 | denotes | extremity |
T43 | 591-596 | http://purl.obolibrary.org/obo/UBERON_0001021 | denotes | nerve |
T44 | 613-618 | http://purl.obolibrary.org/obo/UBERON_0001021 | denotes | nerve |
T45 | 727-730 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 3/6 |
T46 | 731-737 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T19 | 308-315 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T20 | 434-441 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
239 | 297-315 | Gene | denotes | C-reactive protein | Gene:1401 |
240 | 317-320 | Gene | denotes | CRP | Gene:1401 |
241 | 414-417 | Gene | denotes | CSF | Gene:1437 |
242 | 26-34 | Species | denotes | patients | Tax:9606 |
243 | 361-368 | Species | denotes | patient | Tax:9606 |
244 | 738-746 | Species | denotes | patients | Tax:9606 |
245 | 111-135 | Disease | denotes | lower extremity weakness | MESH:D020335 |
246 | 162-178 | Disease | denotes | sensory deficits | MESH:D012678 |
247 | 208-213 | Disease | denotes | cough | MESH:D003371 |
248 | 215-222 | Disease | denotes | anosmia | MESH:D000857 |
249 | 224-231 | Disease | denotes | ageusia | MESH:D000370 |
250 | 237-248 | Disease | denotes | sore throat | MESH:D010608 |
251 | 272-287 | Disease | denotes | lymphocytopenia | MESH:D008231 |
252 | 347-355 | Disease | denotes | COVID-19 | MESH:C000657245 |
253 | 373-407 | Disease | denotes | facial diplegia and sensory ataxia | MESH:C531747 |
254 | 477-485 | Disease | denotes | COVID-19 | MESH:C000657245 |
255 | 525-538 | Disease | denotes | demyelinating | MESH:D003711 |
256 | 651-662 | Disease | denotes | tetraplegia | MESH:D011782 |
257 | 806-810 | Disease | denotes | died | MESH:D003643 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T29 | 0-249 | Sentence | denotes | Italy has just reported 6 patients with GBS,8 1 in this issue.9 All presented with subacute onset of upper and lower extremity weakness, distal paresthesias, and sensory deficits 3–10 days after experiencing cough, anosmia, ageusia, and sore throat. |
T30 | 250-356 | Sentence | denotes | On admission, all had lymphocytopenia and high C-reactive protein (CRP) that led to diagnosis of COVID-19. |
T31 | 357-486 | Sentence | denotes | One patient had facial diplegia and sensory ataxia.8 The CSF showed elevated protein concentration but was negative for COVID-19. |
T32 | 487-553 | Sentence | denotes | Electrophysiology was consistent with demyelinating or axonal GBS. |
T33 | 554-619 | Sentence | denotes | MRI showed enhancement of the caudal nerve roots or facial nerve. |
T34 | 620-696 | Sentence | denotes | Symptoms rapidly progressed to tetraplegia requiring mechanical ventilation. |
T35 | 697-761 | Sentence | denotes | Antiganglioside antibodies in 3/6 tested patients were negative. |
T36 | 762-811 | Sentence | denotes | All received IVIg with variable recovery; 1 died. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T45 | 111-135 | Phenotype | denotes | lower extremity weakness | http://purl.obolibrary.org/obo/HP_0007340 |
T46 | 144-156 | Phenotype | denotes | paresthesias | http://purl.obolibrary.org/obo/HP_0003401 |
T47 | 208-213 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
T48 | 215-222 | Phenotype | denotes | anosmia | http://purl.obolibrary.org/obo/HP_0000458 |
T49 | 224-231 | Phenotype | denotes | ageusia | http://purl.obolibrary.org/obo/HP_0041051 |
T50 | 237-248 | Phenotype | denotes | sore throat | http://purl.obolibrary.org/obo/HP_0033050 |
T51 | 272-287 | Phenotype | denotes | lymphocytopenia | http://purl.obolibrary.org/obo/HP_0001888 |
T52 | 373-388 | Phenotype | denotes | facial diplegia | http://purl.obolibrary.org/obo/HP_0001349 |
T53 | 393-407 | Phenotype | denotes | sensory ataxia | http://purl.obolibrary.org/obo/HP_0010871 |
T54 | 525-538 | Phenotype | denotes | demyelinating | http://purl.obolibrary.org/obo/HP_0011096 |
T55 | 651-662 | Phenotype | denotes | tetraplegia | http://purl.obolibrary.org/obo/HP_0002445 |