PMC:7309518 / 5518-6400
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T23 | 137-152 | Body_part | denotes | lower extremity | http://purl.org/sig/ont/fma/fma7184 |
| T24 | 309-312 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
| T25 | 313-320 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T26 | 501-515 | Body_part | denotes | immunoglobulin | http://purl.org/sig/ont/fma/fma62871 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T89 | 265-268 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T90 | 369-379 | Disease | denotes | neuropathy | http://purl.obolibrary.org/obo/MONDO_0005244 |
| T91 | 432-447 | Disease | denotes | lymphocytopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
| T92 | 452-468 | Disease | denotes | thrombocytopenia | http://purl.obolibrary.org/obo/MONDO_0002049 |
| T93 | 568-577 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T94 | 589-597 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T95 | 651-666 | Disease | denotes | lymphocytopenia | http://purl.obolibrary.org/obo/MONDO_0003783 |
| T96 | 768-776 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T97 | 791-800 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T98 | 856-859 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T35 | 58-59 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T36 | 143-152 | http://www.ebi.ac.uk/efo/EFO_0000876 | denotes | extremity |
| T37 | 211-215 | http://www.ebi.ac.uk/efo/EFO_0001410 | denotes | arms |
| T38 | 396-400 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T39 | 582-588 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T40 | 761-767 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T18 | 313-320 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 206 | 309-312 | Gene | denotes | CSF | Gene:1437 |
| 207 | 60-65 | Species | denotes | woman | Tax:9606 |
| 208 | 153-161 | Disease | denotes | weakness | MESH:D018908 |
| 209 | 166-175 | Disease | denotes | areflexia | MESH:D000071699 |
| 210 | 355-379 | Disease | denotes | demyelinating neuropathy | MESH:D003711 |
| 211 | 432-447 | Disease | denotes | lymphocytopenia | MESH:D008231 |
| 212 | 452-468 | Disease | denotes | thrombocytopenia | MESH:D013921 |
| 213 | 550-555 | Disease | denotes | fever | MESH:D005334 |
| 214 | 557-562 | Disease | denotes | cough | MESH:D003371 |
| 215 | 568-577 | Disease | denotes | pneumonia | MESH:D011014 |
| 216 | 589-597 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 217 | 651-666 | Disease | denotes | lymphocytopenia | MESH:D008231 |
| 218 | 768-776 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 219 | 791-800 | Disease | denotes | pneumonia | MESH:D011014 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 0-380 | Sentence | denotes | The very first case—and the only one from Wuhan—refers to a woman who 4 days after returning to Shanghai from Wuhan presented with acute lower extremity weakness and areflexia that progressed over 3 days to the arms without any systemic symptoms.7 When first seen, GBS was suspected and confirmed by elevated CSF protein and electromyographic features of demyelinating neuropathy. |
| T25 | 381-469 | Sentence | denotes | Her laboratory test results were normal, except of lymphocytopenia and thrombocytopenia. |
| T26 | 470-607 | Sentence | denotes | She was started on intravenous immunoglobulin (IVIg) but 4 days later developed fever, cough, and pneumonia and tested COVID-19 positive. |
| T27 | 608-676 | Sentence | denotes | After 3 weeks, her strength normalized and lymphocytopenia resolved. |
| T28 | 677-882 | Sentence | denotes | While at the regular neurology ward, however, 2 of her relatives taking care of her tested COVID-19 positive with pneumonia, while 2 of her neurologists and 6 nurses treating her GBS were put on isolation. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T33 | 137-161 | Phenotype | denotes | lower extremity weakness | http://purl.obolibrary.org/obo/HP_0007340 |
| T34 | 166-175 | Phenotype | denotes | areflexia | http://purl.obolibrary.org/obo/HP_0001284 |
| T35 | 300-320 | Phenotype | denotes | elevated CSF protein | http://purl.obolibrary.org/obo/HP_0002922 |
| T36 | 355-368 | Phenotype | denotes | demyelinating | http://purl.obolibrary.org/obo/HP_0011096 |
| T37 | 369-379 | Phenotype | denotes | neuropathy | http://purl.obolibrary.org/obo/HP_0009830 |
| T38 | 432-447 | Phenotype | denotes | lymphocytopenia | http://purl.obolibrary.org/obo/HP_0001888 |
| T39 | 452-468 | Phenotype | denotes | thrombocytopenia | http://purl.obolibrary.org/obo/HP_0001873 |
| T40 | 550-555 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T41 | 557-562 | Phenotype | denotes | cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T42 | 568-577 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T43 | 651-666 | Phenotype | denotes | lymphocytopenia | http://purl.obolibrary.org/obo/HP_0001888 |
| T44 | 791-800 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |