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PMC:7307149 / 9275-9711 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T55 25-33 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T56 35-42 Body_part denotes Protein http://purl.org/sig/ont/fma/fma67257
T57 364-371 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T55 190-198 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T56 202-210 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T95 7-12 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T96 95-103 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T97 165-170 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T98 252-257 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T40 25-33 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T41 35-42 Chemical denotes Protein http://purl.obolibrary.org/obo/CHEBI_16541
T42 364-371 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
199 133-141 Gene denotes helicase Gene:164045
200 7-24 Species denotes human coronavirus Tax:694448
201 165-170 Species denotes human Tax:9606
202 171-188 Species denotes betacoronaviruses Tax:694002
203 190-200 Species denotes SARS-CoV-2 Tax:2697049
204 202-210 Species denotes SARS-CoV Tax:694009
205 228-236 Species denotes MERS-CoV Tax:1335626
206 252-257 Species denotes human Tax:9606
207 400-411 Species denotes coronavirus Tax:11118

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T58 35-293 Sentence denotes Protein sequence alignments are shown for nucleocapsid (N), membrane (M), and ORF1ab polyprotein (helicase) across all five known human betacoronaviruses (SARS-CoV-2, SARS-CoV, HKU1, OC43, and MERS-CoV) and two known human alphacoronaviruses (229E and NL63).