PMC:7307149 / 7256-7977
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T49 | 22-25 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T50 | 178-181 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T51 | 403-406 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T52 | 73-81 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T74 | 118-126 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T75 | 138-140 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T76 | 202-203 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T77 | 331-339 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T78 | 407-408 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T79 | 411-412 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T80 | 506-514 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T21 | 118-126 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T22 | 331-339 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T23 | 506-514 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 166 | 403-420 | Gene | denotes | HLA-A, -B, and -C | Gene:3105 |
| 167 | 73-83 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T49 | 0-93 | Sentence | denotes | FIG 1 Distribution of HLA allelic presentation of 8- to 12-mers from the SARS-CoV-2 proteome. |
| T50 | 94-443 | Sentence | denotes | At right, the number of peptides (see Table S1) that putatively bind to each of 145 HLA alleles is shown as a series of horizontal bars, with dark and light shading indicating the number of tightly (<50 nM) and loosely (<500 nM) binding peptides, respectively, and with green, orange, and purple representing HLA-A, -B, and -C alleles, respectively. |
| T51 | 444-540 | Sentence | denotes | Alleles are sorted in descending order based on the number of peptides that they bind (<500 nM). |