PMC:7307149 / 11402-12226
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T70 | 22-25 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T71 | 256-259 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
| T72 | 481-484 | Body_part | denotes | HLA | http://purl.org/sig/ont/fma/fma84795 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T60 | 149-157 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T119 | 68-73 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T120 | 86-94 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T121 | 193-201 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T122 | 241-242 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T123 | 280-281 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T124 | 409-417 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T125 | 485-486 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T126 | 489-490 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T127 | 584-592 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T60 | 86-94 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T61 | 193-201 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T62 | 213-215 | Chemical | denotes | S3 | http://purl.obolibrary.org/obo/CHEBI_29388 |
| T63 | 409-417 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T64 | 584-592 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 235 | 481-498 | Gene | denotes | HLA-A, -B, and -C | Gene:3105 |
| 236 | 68-85 | Species | denotes | human coronavirus | Tax:694448 |
| 237 | 149-157 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T68 | 0-158 | Sentence | denotes | FIG 3 Distribution of HLA allelic presentations of highly conserved human coronavirus peptides with potential to elicit cross-protective immunity to COVID-19. |
| T69 | 159-521 | Sentence | denotes | At right, the number of conserved peptides (see Table S3) that putatively bind to a subset of 89 HLA alleles is shown as a series of horizontal bars, with dark and light shading indicating the number of tightly (<50 nM) and loosely (<500 nM) binding peptides, respectively, and with green, orange, and purple representing HLA-A, -B, and -C alleles, respectively. |
| T70 | 522-653 | Sentence | denotes | Alleles are sorted in descending order based on the number of peptides they are anticipated to present (binding affinity, <500 nM). |