
PMC:7306567 / 22869-23406
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T28 | 83-88 | Body_part | denotes | Serum | http://purl.org/sig/ont/fma/fma63083 |
T29 | 200-206 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
T30 | 312-317 | Body_part | denotes | Serum | http://purl.org/sig/ont/fma/fma63083 |
T31 | 485-491 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T24 | 83-88 | Body_part | denotes | Serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
T25 | 200-206 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
T26 | 312-317 | Body_part | denotes | Serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
T27 | 485-491 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T98 | 42-47 | Disease | denotes | ulcer | http://purl.obolibrary.org/obo/MONDO_0043839 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T148 | 9-15 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | Airway |
T149 | 253-254 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T150 | 382-383 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T148 | 89-91 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
T150 | 107-110 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
T151 | 111-113 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
T153 | 138-141 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
T154 | 318-320 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
T156 | 336-339 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
T157 | 340-342 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680 |
T159 | 367-370 | Chemical | denotes | BAL | http://purl.obolibrary.org/obo/CHEBI_64198 |
LitCovid-PD-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
---|---|---|---|---|---|
T14 | 89-91 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
T15 | 111-113 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
T16 | 318-320 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
T17 | 340-342 | GlycoEpitope | denotes | GM | http://www.glycoepitope.jp/epitopes/EP0510 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T30 | 256-276 | Phenotype | denotes | Pulmonary infiltrate | http://purl.obolibrary.org/obo/HP_0002113 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T151 | 0-47 | Sentence | denotes | Probable Airway plaque, pseudomembrane or ulcer |
T152 | 48-82 | Sentence | denotes | and at least one of the following: |
T153 | 83-103 | Sentence | denotes | Serum GM index > 0.5 |
T154 | 104-106 | Sentence | denotes | or |
T155 | 107-125 | Sentence | denotes | BAL GM index ≥ 1.0 |
T156 | 126-128 | Sentence | denotes | or |
T157 | 129-149 | Sentence | denotes | Positive BAL culture |
T158 | 150-152 | Sentence | denotes | or |
T159 | 153-187 | Sentence | denotes | Positive tracheal aspirate culture |
T160 | 188-190 | Sentence | denotes | or |
T161 | 191-214 | Sentence | denotes | Positive sputum culture |
T162 | 215-217 | Sentence | denotes | or |
T163 | 218-255 | Sentence | denotes | Hyphae consistent with Aspergillus A: |
T164 | 256-276 | Sentence | denotes | Pulmonary infiltrate |
T165 | 277-311 | Sentence | denotes | and at least one of the following: |
T166 | 312-332 | Sentence | denotes | Serum GM index > 0.5 |
T167 | 333-335 | Sentence | denotes | or |
T168 | 336-354 | Sentence | denotes | BAL GM index ≥ 1.0 |
T169 | 355-357 | Sentence | denotes | or |
T170 | 358-378 | Sentence | denotes | Positive BAL culture |
T171 | 379-381 | Sentence | denotes | OR |
T172 | 382-384 | Sentence | denotes | B: |
T173 | 385-440 | Sentence | denotes | Cavitating infiltrate (not attributed to another cause) |
T174 | 441-475 | Sentence | denotes | and at least one of the following: |
T175 | 476-499 | Sentence | denotes | Positive sputum culture |
T176 | 500-502 | Sentence | denotes | or |
T177 | 503-537 | Sentence | denotes | Positive tracheal aspirate culture |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T187 | 83-88 | UBERON:0001977 | denotes | Serum |
T188 | 162-170 | UBERON:0003126 | denotes | tracheal |
T189 | 200-206 | UBERON:0007311 | denotes | sputum |
T190 | 256-265 | UBERON:0002048 | denotes | Pulmonary |
T191 | 312-317 | UBERON:0001977 | denotes | Serum |
T192 | 485-491 | UBERON:0007311 | denotes | sputum |
T193 | 512-520 | UBERON:0003126 | denotes | tracheal |
T49668 | 83-88 | UBERON:0001977 | denotes | Serum |
T42816 | 162-170 | UBERON:0003126 | denotes | tracheal |
T82825 | 200-206 | UBERON:0007311 | denotes | sputum |
T7327 | 256-265 | UBERON:0002048 | denotes | Pulmonary |
T86954 | 312-317 | UBERON:0001977 | denotes | Serum |
T76040 | 485-491 | UBERON:0007311 | denotes | sputum |
T7513 | 512-520 | UBERON:0003126 | denotes | tracheal |