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PMC:7306567 / 22869-23406 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T28 83-88 Body_part denotes Serum http://purl.org/sig/ont/fma/fma63083
T29 200-206 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T30 312-317 Body_part denotes Serum http://purl.org/sig/ont/fma/fma63083
T31 485-491 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T24 83-88 Body_part denotes Serum http://purl.obolibrary.org/obo/UBERON_0001977
T25 200-206 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T26 312-317 Body_part denotes Serum http://purl.obolibrary.org/obo/UBERON_0001977
T27 485-491 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T98 42-47 Disease denotes ulcer http://purl.obolibrary.org/obo/MONDO_0043839

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T148 9-15 http://purl.obolibrary.org/obo/UBERON_0001005 denotes Airway
T149 253-254 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T150 382-383 http://purl.obolibrary.org/obo/CLO_0001021 denotes B

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T148 89-91 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T150 107-110 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T151 111-113 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T153 138-141 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T154 318-320 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T156 336-339 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198
T157 340-342 Chemical denotes GM http://purl.obolibrary.org/obo/CHEBI_74120|http://purl.obolibrary.org/obo/CHEBI_27680
T159 367-370 Chemical denotes BAL http://purl.obolibrary.org/obo/CHEBI_64198

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T14 89-91 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T15 111-113 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T16 318-320 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510
T17 340-342 GlycoEpitope denotes GM http://www.glycoepitope.jp/epitopes/EP0510

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T30 256-276 Phenotype denotes Pulmonary infiltrate http://purl.obolibrary.org/obo/HP_0002113

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T151 0-47 Sentence denotes Probable Airway plaque, pseudomembrane or ulcer
T152 48-82 Sentence denotes and at least one of the following:
T153 83-103 Sentence denotes Serum GM index > 0.5
T154 104-106 Sentence denotes or
T155 107-125 Sentence denotes BAL GM index ≥ 1.0
T156 126-128 Sentence denotes or
T157 129-149 Sentence denotes Positive BAL culture
T158 150-152 Sentence denotes or
T159 153-187 Sentence denotes Positive tracheal aspirate culture
T160 188-190 Sentence denotes or
T161 191-214 Sentence denotes Positive sputum culture
T162 215-217 Sentence denotes or
T163 218-255 Sentence denotes Hyphae consistent with Aspergillus A:
T164 256-276 Sentence denotes Pulmonary infiltrate
T165 277-311 Sentence denotes and at least one of the following:
T166 312-332 Sentence denotes Serum GM index > 0.5
T167 333-335 Sentence denotes or
T168 336-354 Sentence denotes BAL GM index ≥ 1.0
T169 355-357 Sentence denotes or
T170 358-378 Sentence denotes Positive BAL culture
T171 379-381 Sentence denotes OR
T172 382-384 Sentence denotes B:
T173 385-440 Sentence denotes Cavitating infiltrate (not attributed to another cause)
T174 441-475 Sentence denotes and at least one of the following:
T175 476-499 Sentence denotes Positive sputum culture
T176 500-502 Sentence denotes or
T177 503-537 Sentence denotes Positive tracheal aspirate culture

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T187 83-88 UBERON:0001977 denotes Serum
T188 162-170 UBERON:0003126 denotes tracheal
T189 200-206 UBERON:0007311 denotes sputum
T190 256-265 UBERON:0002048 denotes Pulmonary
T191 312-317 UBERON:0001977 denotes Serum
T192 485-491 UBERON:0007311 denotes sputum
T193 512-520 UBERON:0003126 denotes tracheal
T49668 83-88 UBERON:0001977 denotes Serum
T42816 162-170 UBERON:0003126 denotes tracheal
T82825 200-206 UBERON:0007311 denotes sputum
T7327 256-265 UBERON:0002048 denotes Pulmonary
T86954 312-317 UBERON:0001977 denotes Serum
T76040 485-491 UBERON:0007311 denotes sputum
T7513 512-520 UBERON:0003126 denotes tracheal