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PMC:7301188 / 9724-10557 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T62 5-15 SP_7 denotes SARS-CoV-2
T63 46-77 PG_10;PR:000003622 denotes angiotensin-converting enzyme 2
T64 79-83 G_3;PG_10;PR:000003622 denotes ACE2
T65 121-128 CL:0000219;UBERON:0000344 denotes mucosal
T66 129-139 UBERON:0000483;CL:0000066 denotes epithelial
T67 140-145 CL:0000066 denotes cells
T68 197-201 PR:000017540 denotes PAMP
T69 236-249 UBERON:0002405 denotes immune system
T70 255-261 UBERON:0002405;GO:0006955 denotes immune
T71 262-270 GO:0006955 denotes response
T72 297-302 NCBITaxon:10239 denotes virus
T73 327-333 UBERON:0002405;GO:0006955 denotes immune
T74 334-342 GO:0006955 denotes response
T75 417-428 UBERON:0001986 denotes endothelial
T76 451-462 GO:0050817 denotes coagulation
T77 488-500 GO:0042730 denotes fibrinolytic
T78 505-520 GO:0050817 denotes anticoagulating
T79 540-550 GO:0007596 denotes thromboses
T80 572-578 UBERON:0002049 denotes system
T81 614-625 GO:0050817 denotes coagulation
T82 696-701 UBERON:0000062 denotes organ
T83 774-785 GO:0050817 denotes coagulation
T14036 5-15 SP_7 denotes SARS-CoV-2
T34847 46-77 PG_10;PR:000003622 denotes angiotensin-converting enzyme 2
T90610 79-83 G_3;PG_10;PR:000003622 denotes ACE2
T49124 121-128 CL:0000219;UBERON:0000344 denotes mucosal
T79134 129-139 UBERON:0000483;CL:0000066 denotes epithelial
T19986 140-145 CL:0000066 denotes cells
T31255 197-201 PR:000017540 denotes PAMP
T47825 236-249 UBERON:0002405 denotes immune system
T35483 255-261 UBERON:0002405;GO:0006955 denotes immune
T70637 262-270 GO:0006955 denotes response
T26218 297-302 NCBITaxon:10239 denotes virus
T6087 327-333 UBERON:0002405;GO:0006955 denotes immune
T65360 334-342 GO:0006955 denotes response
T64424 417-428 UBERON:0001986 denotes endothelial
T91538 451-462 GO:0050817 denotes coagulation
T61209 488-500 GO:0042730 denotes fibrinolytic
T1741 505-520 GO:0050817 denotes anticoagulating
T24928 540-550 GO:0007596 denotes thromboses
T35188 572-578 UBERON:0002049 denotes system
T27616 614-625 GO:0050817 denotes coagulation
T2954 696-701 UBERON:0000062 denotes organ
T2895 774-785 GO:0050817 denotes coagulation

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T12 29-33 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T13 129-145 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T14 140-145 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T15 236-249 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T16 357-365 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T17 386-394 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T18 696-701 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T11 236-249 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T12 696-701 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
256 46-77 Gene denotes angiotensin-converting enzyme 2 Gene:59272
257 79-83 Gene denotes ACE2 Gene:59272
258 5-15 Species denotes SARS-CoV-2 Tax:2697049
259 408-435 Disease denotes vascular endothelial damage MESH:D057772
260 530-550 Disease denotes Excessive thromboses MESH:D013927
261 587-625 Disease denotes disseminated intravascular coagulation MESH:D004211
262 627-630 Disease denotes DIC MESH:D004211
263 687-722 Disease denotes multiple organ dysfunction syndrome MESH:D009102
264 774-797 Disease denotes coagulation dysfunction MESH:D001778
265 823-832 Disease denotes mortality MESH:D003643

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T77 5-13 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T78 540-550 Disease denotes thromboses http://purl.obolibrary.org/obo/MONDO_0000831
T79 587-631 Disease denotes disseminated intravascular coagulation (DIC) http://purl.obolibrary.org/obo/MONDO_0001243
T80 687-722 Disease denotes multiple organ dysfunction syndrome http://purl.obolibrary.org/obo/MONDO_0043726

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T84 129-139 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T85 140-145 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T86 236-249 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system
T87 274-283 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T88 297-302 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T89 355-356 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T90 376-377 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T91 437-446 http://purl.obolibrary.org/obo/CLO_0001658 denotes activates
T92 696-701 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T93 724-726 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T49 46-57 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T50 627-630 Chemical denotes DIC http://purl.obolibrary.org/obo/CHEBI_4305|http://purl.obolibrary.org/obo/CHEBI_53092

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T9 255-270 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T10 327-342 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T11 437-462 http://purl.obolibrary.org/obo/GO_0050820 denotes activates the coagulation
T12 451-462 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T13 614-625 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation
T14 774-785 http://purl.obolibrary.org/obo/GO_0050817 denotes coagulation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T103 0-303 Sentence denotes Upon SARS-CoV-2 entering the body through the angiotensin-converting enzyme 2 (ACE2) receptor adsorbed on the surface of mucosal epithelial cells [7, 8], its pathogen-associated molecular pattern (PAMP) can be quickly recognized by the immune system, and immune response is activated to clear the virus.
T104 304-372 Sentence denotes However, overactivated immune response could cause a cytokine storm.
T105 373-529 Sentence denotes As a result, cytokine storm causes vascular endothelial damage, activates the coagulation system, and inhibits the fibrinolytic and anticoagulating systems.
T106 530-728 Sentence denotes Excessive thromboses in the microvascular system lead to disseminated intravascular coagulation (DIC) and, ultimately, microcirculatory disorder and serious multiple organ dysfunction syndrome [11].
T107 729-833 Sentence denotes Therefore, early detection and correction of coagulation dysfunction could effectively reduce mortality.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T14 357-371 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T15 386-400 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T16 587-625 Phenotype denotes disseminated intravascular coagulation http://purl.obolibrary.org/obo/HP_0005521
T17 627-630 Phenotype denotes DIC http://purl.obolibrary.org/obo/HP_0005521

2_test

Id Subject Object Predicate Lexical cue
32596339-31996437-7053682 147-148 31996437 denotes 7
32596339-18424768-7053683 150-151 18424768 denotes 8
32596339-12490963-7053684 724-726 12490963 denotes 11