PMC:7301188 / 9724-10557
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T62 | 5-15 | SP_7 | denotes | SARS-CoV-2 |
T63 | 46-77 | PG_10;PR:000003622 | denotes | angiotensin-converting enzyme 2 |
T64 | 79-83 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T65 | 121-128 | CL:0000219;UBERON:0000344 | denotes | mucosal |
T66 | 129-139 | UBERON:0000483;CL:0000066 | denotes | epithelial |
T67 | 140-145 | CL:0000066 | denotes | cells |
T68 | 197-201 | PR:000017540 | denotes | PAMP |
T69 | 236-249 | UBERON:0002405 | denotes | immune system |
T70 | 255-261 | UBERON:0002405;GO:0006955 | denotes | immune |
T71 | 262-270 | GO:0006955 | denotes | response |
T72 | 297-302 | NCBITaxon:10239 | denotes | virus |
T73 | 327-333 | UBERON:0002405;GO:0006955 | denotes | immune |
T74 | 334-342 | GO:0006955 | denotes | response |
T75 | 417-428 | UBERON:0001986 | denotes | endothelial |
T76 | 451-462 | GO:0050817 | denotes | coagulation |
T77 | 488-500 | GO:0042730 | denotes | fibrinolytic |
T78 | 505-520 | GO:0050817 | denotes | anticoagulating |
T79 | 540-550 | GO:0007596 | denotes | thromboses |
T80 | 572-578 | UBERON:0002049 | denotes | system |
T81 | 614-625 | GO:0050817 | denotes | coagulation |
T82 | 696-701 | UBERON:0000062 | denotes | organ |
T83 | 774-785 | GO:0050817 | denotes | coagulation |
T14036 | 5-15 | SP_7 | denotes | SARS-CoV-2 |
T34847 | 46-77 | PG_10;PR:000003622 | denotes | angiotensin-converting enzyme 2 |
T90610 | 79-83 | G_3;PG_10;PR:000003622 | denotes | ACE2 |
T49124 | 121-128 | CL:0000219;UBERON:0000344 | denotes | mucosal |
T79134 | 129-139 | UBERON:0000483;CL:0000066 | denotes | epithelial |
T19986 | 140-145 | CL:0000066 | denotes | cells |
T31255 | 197-201 | PR:000017540 | denotes | PAMP |
T47825 | 236-249 | UBERON:0002405 | denotes | immune system |
T35483 | 255-261 | UBERON:0002405;GO:0006955 | denotes | immune |
T70637 | 262-270 | GO:0006955 | denotes | response |
T26218 | 297-302 | NCBITaxon:10239 | denotes | virus |
T6087 | 327-333 | UBERON:0002405;GO:0006955 | denotes | immune |
T65360 | 334-342 | GO:0006955 | denotes | response |
T64424 | 417-428 | UBERON:0001986 | denotes | endothelial |
T91538 | 451-462 | GO:0050817 | denotes | coagulation |
T61209 | 488-500 | GO:0042730 | denotes | fibrinolytic |
T1741 | 505-520 | GO:0050817 | denotes | anticoagulating |
T24928 | 540-550 | GO:0007596 | denotes | thromboses |
T35188 | 572-578 | UBERON:0002049 | denotes | system |
T27616 | 614-625 | GO:0050817 | denotes | coagulation |
T2954 | 696-701 | UBERON:0000062 | denotes | organ |
T2895 | 774-785 | GO:0050817 | denotes | coagulation |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T12 | 29-33 | Body_part | denotes | body | http://purl.org/sig/ont/fma/fma256135 |
T13 | 129-145 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
T14 | 140-145 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T15 | 236-249 | Body_part | denotes | immune system | http://purl.org/sig/ont/fma/fma9825 |
T16 | 357-365 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T17 | 386-394 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
T18 | 696-701 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T11 | 236-249 | Body_part | denotes | immune system | http://purl.obolibrary.org/obo/UBERON_0002405 |
T12 | 696-701 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
256 | 46-77 | Gene | denotes | angiotensin-converting enzyme 2 | Gene:59272 |
257 | 79-83 | Gene | denotes | ACE2 | Gene:59272 |
258 | 5-15 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
259 | 408-435 | Disease | denotes | vascular endothelial damage | MESH:D057772 |
260 | 530-550 | Disease | denotes | Excessive thromboses | MESH:D013927 |
261 | 587-625 | Disease | denotes | disseminated intravascular coagulation | MESH:D004211 |
262 | 627-630 | Disease | denotes | DIC | MESH:D004211 |
263 | 687-722 | Disease | denotes | multiple organ dysfunction syndrome | MESH:D009102 |
264 | 774-797 | Disease | denotes | coagulation dysfunction | MESH:D001778 |
265 | 823-832 | Disease | denotes | mortality | MESH:D003643 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T77 | 5-13 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T78 | 540-550 | Disease | denotes | thromboses | http://purl.obolibrary.org/obo/MONDO_0000831 |
T79 | 587-631 | Disease | denotes | disseminated intravascular coagulation (DIC) | http://purl.obolibrary.org/obo/MONDO_0001243 |
T80 | 687-722 | Disease | denotes | multiple organ dysfunction syndrome | http://purl.obolibrary.org/obo/MONDO_0043726 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T84 | 129-139 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
T85 | 140-145 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T86 | 236-249 | http://purl.obolibrary.org/obo/UBERON_0002405 | denotes | immune system |
T87 | 274-283 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activated |
T88 | 297-302 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T89 | 355-356 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T90 | 376-377 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T91 | 437-446 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activates |
T92 | 696-701 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
T93 | 724-726 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T49 | 46-57 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
T50 | 627-630 | Chemical | denotes | DIC | http://purl.obolibrary.org/obo/CHEBI_4305|http://purl.obolibrary.org/obo/CHEBI_53092 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9 | 255-270 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune response |
T10 | 327-342 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune response |
T11 | 437-462 | http://purl.obolibrary.org/obo/GO_0050820 | denotes | activates the coagulation |
T12 | 451-462 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
T13 | 614-625 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
T14 | 774-785 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T103 | 0-303 | Sentence | denotes | Upon SARS-CoV-2 entering the body through the angiotensin-converting enzyme 2 (ACE2) receptor adsorbed on the surface of mucosal epithelial cells [7, 8], its pathogen-associated molecular pattern (PAMP) can be quickly recognized by the immune system, and immune response is activated to clear the virus. |
T104 | 304-372 | Sentence | denotes | However, overactivated immune response could cause a cytokine storm. |
T105 | 373-529 | Sentence | denotes | As a result, cytokine storm causes vascular endothelial damage, activates the coagulation system, and inhibits the fibrinolytic and anticoagulating systems. |
T106 | 530-728 | Sentence | denotes | Excessive thromboses in the microvascular system lead to disseminated intravascular coagulation (DIC) and, ultimately, microcirculatory disorder and serious multiple organ dysfunction syndrome [11]. |
T107 | 729-833 | Sentence | denotes | Therefore, early detection and correction of coagulation dysfunction could effectively reduce mortality. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T14 | 357-371 | Phenotype | denotes | cytokine storm | http://purl.obolibrary.org/obo/HP_0033041 |
T15 | 386-400 | Phenotype | denotes | cytokine storm | http://purl.obolibrary.org/obo/HP_0033041 |
T16 | 587-625 | Phenotype | denotes | disseminated intravascular coagulation | http://purl.obolibrary.org/obo/HP_0005521 |
T17 | 627-630 | Phenotype | denotes | DIC | http://purl.obolibrary.org/obo/HP_0005521 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32596339-31996437-7053682 | 147-148 | 31996437 | denotes | 7 |
32596339-18424768-7053683 | 150-151 | 18424768 | denotes | 8 |
32596339-12490963-7053684 | 724-726 | 12490963 | denotes | 11 |