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PMC:7299399 / 4570-5354 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 171-177 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T8 360-365 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T9 561-566 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T10 568-574 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T11 576-579 Body_part denotes eye http://purl.org/sig/ont/fma/fma54448
T12 602-607 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 171-177 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T3 360-365 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T4 542-548 Body_part denotes organs http://purl.obolibrary.org/obo/UBERON_0000062
T5 561-566 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T6 568-574 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T7 576-579 Body_part denotes eye http://purl.obolibrary.org/obo/UBERON_0000970
T8 602-607 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T21 21-29 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T22 166-177 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T23 189-197 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T24 323-335 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T25 337-345 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T26 351-373 Disease denotes coronary heart disease http://purl.obolibrary.org/obo/MONDO_0005010
T27 360-373 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T28 500-508 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T29 581-595 Disease denotes conjunctivitis http://purl.obolibrary.org/obo/MONDO_0003799
T30 609-621 Disease denotes encephalitis http://purl.obolibrary.org/obo/MONDO_0019956
T31 693-701 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T34 360-365 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T35 360-365 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T36 360-365 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T37 360-365 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T38 542-548 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organs
T39 561-566 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T40 561-566 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T41 561-566 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T42 561-566 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T43 568-574 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T44 568-574 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T45 568-574 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T46 576-579 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eye
T47 602-607 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T48 602-607 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T49 626-628 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T15 655-660 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T16 765-773 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T5 34-39 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T6 49-54 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T7 68-75 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T8 120-127 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T9 129-137 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T10 166-177 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T11 179-187 Phenotype denotes vomiting http://purl.obolibrary.org/obo/HP_0002013
T12 189-197 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T13 199-209 Phenotype denotes rhinorrhea http://purl.obolibrary.org/obo/HP_0031417
T14 215-229 Phenotype denotes abdominal pain http://purl.obolibrary.org/obo/HP_0002027
T15 323-335 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T16 581-595 Phenotype denotes conjunctivitis http://purl.obolibrary.org/obo/HP_0000509
T17 609-621 Phenotype denotes encephalitis http://purl.obolibrary.org/obo/HP_0002383

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T24 0-84 Sentence denotes The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%).
T25 85-230 Sentence denotes Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain.
T26 231-784 Sentence denotes The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
83 258-266 Species denotes patients Tax:9606
84 509-517 Species denotes patients Tax:9606
85 21-29 Disease denotes COVID-19 MESH:C000657245
86 34-39 Disease denotes fever MESH:D005334
87 49-54 Disease denotes cough MESH:D003371
88 68-75 Disease denotes fatigue MESH:D005221
89 120-127 Disease denotes dyspnea MESH:D004417
90 129-137 Disease denotes headache MESH:D006261
91 139-155 Disease denotes loss of appetite MESH:D001068
92 166-177 Disease denotes sore throat MESH:D010608
93 179-187 Disease denotes vomiting MESH:D014839
94 189-197 Disease denotes diarrhea MESH:D003967
95 199-209 Disease denotes rhinorrhea MESH:D012818
96 215-229 Disease denotes abdominal pain MESH:D015746
97 323-335 Disease denotes hypertension MESH:D006973
98 337-345 Disease denotes diabetes MESH:D003920
99 351-373 Disease denotes coronary heart disease MESH:D003324
100 500-508 Disease denotes COVID-19 MESH:C000657245
101 581-595 Disease denotes conjunctivitis MESH:D003231
102 609-621 Disease denotes encephalitis MESH:D004660
103 693-701 Disease denotes COVID-19 MESH:C000657245

2_test

Id Subject Object Predicate Lexical cue
32519842-31986264-158451 377-379 31986264 denotes 13
32519842-32150748-158452 463-465 32150748 denotes 14
32519842-32247212-158453 623-625 32247212 denotes 15