PMC:7299399 / 4570-5354 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T7","span":{"begin":171,"end":177},"obj":"Body_part"},{"id":"T8","span":{"begin":360,"end":365},"obj":"Body_part"},{"id":"T9","span":{"begin":561,"end":566},"obj":"Body_part"},{"id":"T10","span":{"begin":568,"end":574},"obj":"Body_part"},{"id":"T11","span":{"begin":576,"end":579},"obj":"Body_part"},{"id":"T12","span":{"begin":602,"end":607},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma228738"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma7088"},{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma7088"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma54448"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma50801"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T2","span":{"begin":171,"end":177},"obj":"Body_part"},{"id":"T3","span":{"begin":360,"end":365},"obj":"Body_part"},{"id":"T4","span":{"begin":542,"end":548},"obj":"Body_part"},{"id":"T5","span":{"begin":561,"end":566},"obj":"Body_part"},{"id":"T6","span":{"begin":568,"end":574},"obj":"Body_part"},{"id":"T7","span":{"begin":576,"end":579},"obj":"Body_part"},{"id":"T8","span":{"begin":602,"end":607},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0000970"},{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0000955"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T21","span":{"begin":21,"end":29},"obj":"Disease"},{"id":"T22","span":{"begin":166,"end":177},"obj":"Disease"},{"id":"T23","span":{"begin":189,"end":197},"obj":"Disease"},{"id":"T24","span":{"begin":323,"end":335},"obj":"Disease"},{"id":"T25","span":{"begin":337,"end":345},"obj":"Disease"},{"id":"T26","span":{"begin":351,"end":373},"obj":"Disease"},{"id":"T27","span":{"begin":360,"end":373},"obj":"Disease"},{"id":"T28","span":{"begin":500,"end":508},"obj":"Disease"},{"id":"T29","span":{"begin":581,"end":595},"obj":"Disease"},{"id":"T30","span":{"begin":609,"end":621},"obj":"Disease"},{"id":"T31","span":{"begin":693,"end":701},"obj":"Disease"}],"attributes":[{"id":"A21","pred":"mondo_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A22","pred":"mondo_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/MONDO_0002258"},{"id":"A23","pred":"mondo_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/MONDO_0001673"},{"id":"A24","pred":"mondo_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/MONDO_0005044"},{"id":"A25","pred":"mondo_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/MONDO_0005015"},{"id":"A26","pred":"mondo_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/MONDO_0005010"},{"id":"A27","pred":"mondo_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/MONDO_0005267"},{"id":"A28","pred":"mondo_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A29","pred":"mondo_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/MONDO_0003799"},{"id":"A30","pred":"mondo_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/MONDO_0019956"},{"id":"A31","pred":"mondo_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T34","span":{"begin":360,"end":365},"obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"T35","span":{"begin":360,"end":365},"obj":"http://purl.obolibrary.org/obo/UBERON_0007100"},{"id":"T36","span":{"begin":360,"end":365},"obj":"http://purl.obolibrary.org/obo/UBERON_0015228"},{"id":"T37","span":{"begin":360,"end":365},"obj":"http://www.ebi.ac.uk/efo/EFO_0000815"},{"id":"T38","span":{"begin":542,"end":548},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T39","span":{"begin":561,"end":566},"obj":"http://purl.obolibrary.org/obo/UBERON_0000948"},{"id":"T40","span":{"begin":561,"end":566},"obj":"http://purl.obolibrary.org/obo/UBERON_0007100"},{"id":"T41","span":{"begin":561,"end":566},"obj":"http://purl.obolibrary.org/obo/UBERON_0015228"},{"id":"T42","span":{"begin":561,"end":566},"obj":"http://www.ebi.ac.uk/efo/EFO_0000815"},{"id":"T43","span":{"begin":568,"end":574},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T44","span":{"begin":568,"end":574},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T45","span":{"begin":568,"end":574},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T46","span":{"begin":576,"end":579},"obj":"http://www.ebi.ac.uk/efo/EFO_0000827"},{"id":"T47","span":{"begin":602,"end":607},"obj":"http://purl.obolibrary.org/obo/UBERON_0000955"},{"id":"T48","span":{"begin":602,"end":607},"obj":"http://www.ebi.ac.uk/efo/EFO_0000302"},{"id":"T49","span":{"begin":626,"end":628},"obj":"http://purl.obolibrary.org/obo/CLO_0050510"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T15","span":{"begin":655,"end":660},"obj":"Chemical"},{"id":"T16","span":{"begin":765,"end":773},"obj":"Chemical"}],"attributes":[{"id":"A15","pred":"chebi_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"},{"id":"A16","pred":"chebi_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T5","span":{"begin":34,"end":39},"obj":"Phenotype"},{"id":"T6","span":{"begin":49,"end":54},"obj":"Phenotype"},{"id":"T7","span":{"begin":68,"end":75},"obj":"Phenotype"},{"id":"T8","span":{"begin":120,"end":127},"obj":"Phenotype"},{"id":"T9","span":{"begin":129,"end":137},"obj":"Phenotype"},{"id":"T10","span":{"begin":166,"end":177},"obj":"Phenotype"},{"id":"T11","span":{"begin":179,"end":187},"obj":"Phenotype"},{"id":"T12","span":{"begin":189,"end":197},"obj":"Phenotype"},{"id":"T13","span":{"begin":199,"end":209},"obj":"Phenotype"},{"id":"T14","span":{"begin":215,"end":229},"obj":"Phenotype"},{"id":"T15","span":{"begin":323,"end":335},"obj":"Phenotype"},{"id":"T16","span":{"begin":581,"end":595},"obj":"Phenotype"},{"id":"T17","span":{"begin":609,"end":621},"obj":"Phenotype"}],"attributes":[{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/HP_0012378"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/HP_0002094"},{"id":"A9","pred":"hp_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/HP_0002315"},{"id":"A10","pred":"hp_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/HP_0033050"},{"id":"A11","pred":"hp_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/HP_0002013"},{"id":"A12","pred":"hp_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/HP_0002014"},{"id":"A13","pred":"hp_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/HP_0031417"},{"id":"A14","pred":"hp_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/HP_0002027"},{"id":"A15","pred":"hp_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/HP_0000822"},{"id":"A16","pred":"hp_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/HP_0000509"},{"id":"A17","pred":"hp_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/HP_0002383"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"LitCovid-sentences","denotations":[{"id":"T24","span":{"begin":0,"end":84},"obj":"Sentence"},{"id":"T25","span":{"begin":85,"end":230},"obj":"Sentence"},{"id":"T26","span":{"begin":231,"end":784},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"LitCovid-PubTator","denotations":[{"id":"83","span":{"begin":258,"end":266},"obj":"Species"},{"id":"84","span":{"begin":509,"end":517},"obj":"Species"},{"id":"85","span":{"begin":21,"end":29},"obj":"Disease"},{"id":"86","span":{"begin":34,"end":39},"obj":"Disease"},{"id":"87","span":{"begin":49,"end":54},"obj":"Disease"},{"id":"88","span":{"begin":68,"end":75},"obj":"Disease"},{"id":"89","span":{"begin":120,"end":127},"obj":"Disease"},{"id":"90","span":{"begin":129,"end":137},"obj":"Disease"},{"id":"91","span":{"begin":139,"end":155},"obj":"Disease"},{"id":"92","span":{"begin":166,"end":177},"obj":"Disease"},{"id":"93","span":{"begin":179,"end":187},"obj":"Disease"},{"id":"94","span":{"begin":189,"end":197},"obj":"Disease"},{"id":"95","span":{"begin":199,"end":209},"obj":"Disease"},{"id":"96","span":{"begin":215,"end":229},"obj":"Disease"},{"id":"97","span":{"begin":323,"end":335},"obj":"Disease"},{"id":"98","span":{"begin":337,"end":345},"obj":"Disease"},{"id":"99","span":{"begin":351,"end":373},"obj":"Disease"},{"id":"100","span":{"begin":500,"end":508},"obj":"Disease"},{"id":"101","span":{"begin":581,"end":595},"obj":"Disease"},{"id":"102","span":{"begin":609,"end":621},"obj":"Disease"},{"id":"103","span":{"begin":693,"end":701},"obj":"Disease"}],"attributes":[{"id":"A83","pred":"tao:has_database_id","subj":"83","obj":"Tax:9606"},{"id":"A84","pred":"tao:has_database_id","subj":"84","obj":"Tax:9606"},{"id":"A85","pred":"tao:has_database_id","subj":"85","obj":"MESH:C000657245"},{"id":"A86","pred":"tao:has_database_id","subj":"86","obj":"MESH:D005334"},{"id":"A87","pred":"tao:has_database_id","subj":"87","obj":"MESH:D003371"},{"id":"A88","pred":"tao:has_database_id","subj":"88","obj":"MESH:D005221"},{"id":"A89","pred":"tao:has_database_id","subj":"89","obj":"MESH:D004417"},{"id":"A90","pred":"tao:has_database_id","subj":"90","obj":"MESH:D006261"},{"id":"A91","pred":"tao:has_database_id","subj":"91","obj":"MESH:D001068"},{"id":"A92","pred":"tao:has_database_id","subj":"92","obj":"MESH:D010608"},{"id":"A93","pred":"tao:has_database_id","subj":"93","obj":"MESH:D014839"},{"id":"A94","pred":"tao:has_database_id","subj":"94","obj":"MESH:D003967"},{"id":"A95","pred":"tao:has_database_id","subj":"95","obj":"MESH:D012818"},{"id":"A96","pred":"tao:has_database_id","subj":"96","obj":"MESH:D015746"},{"id":"A97","pred":"tao:has_database_id","subj":"97","obj":"MESH:D006973"},{"id":"A98","pred":"tao:has_database_id","subj":"98","obj":"MESH:D003920"},{"id":"A99","pred":"tao:has_database_id","subj":"99","obj":"MESH:D003324"},{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"MESH:C000657245"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:D003231"},{"id":"A102","pred":"tao:has_database_id","subj":"102","obj":"MESH:D004660"},{"id":"A103","pred":"tao:has_database_id","subj":"103","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}

{"project":"2_test","denotations":[{"id":"32519842-31986264-158451","span":{"begin":377,"end":379},"obj":"31986264"},{"id":"32519842-32150748-158452","span":{"begin":463,"end":465},"obj":"32150748"},{"id":"32519842-32247212-158453","span":{"begin":623,"end":625},"obj":"32247212"}],"text":"The main symptoms of COVID-19 are fever (85.6%), cough (68.7%), and fatigue (39.4%). Other less common symptoms include dyspnea, headache, loss of appetite, panting, sore throat, vomiting, diarrhea, rhinorrhea, and abdominal pain. The severity of disease in patients depends mainly on the presence of comorbidities such as hypertension, diabetes, and coronary heart disease.12,13 The incubation period is reported to be between 5 and 14 days before disease onset.14 Recent reports indicate that some COVID-19 patients exhibit damage in other organs such as the heart, kidney, eye (conjunctivitis), and brain (encephalitis).15−18 The race is on to develop drugs and treatment options to combat COVID-19, harnessing all of the tools and technologies modern molecular medicine can offer."}