PMC:7295558 / 1797-3008
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T20 | 127-138 | NCBITaxon:11118 | denotes | coronavirus |
T21 | 153-161 | SP_7 | denotes | COVID-19 |
T22 | 186-197 | NCBITaxon:11118 | denotes | coronavirus |
T23 | 198-210 | SP_7 | denotes | severe acute |
T24 | 211-222 | SP_7;UBERON:0001004 | denotes | respiratory |
T25 | 223-245 | SP_7 | denotes | syndrome coronavirus 2 |
T26 | 247-257 | SP_7 | denotes | SARS-CoV-2 |
T27 | 369-377 | SP_7 | denotes | COVID-19 |
T28 | 546-554 | SP_7 | denotes | COVID-19 |
T29 | 587-598 | UBERON:0001004 | denotes | respiratory |
T30 | 707-728 | UBERON:0004535 | denotes | cardiovascular system |
T31 | 836-850 | UBERON:0004535 | denotes | cardiovascular |
T32 | 913-926 | UBERON:0000948 | denotes | Transthoracic |
T33 | 977-987 | UBERON:0002349 | denotes | myocardial |
T34 | 1047-1063 | UBERON:0002084 | denotes | left ventricular |
T35 | 1202-1210 | SP_7 | denotes | COVID-19 |
T20851 | 127-138 | NCBITaxon:11118 | denotes | coronavirus |
T97341 | 153-161 | SP_7 | denotes | COVID-19 |
T61228 | 186-197 | NCBITaxon:11118 | denotes | coronavirus |
T9029 | 198-210 | SP_7 | denotes | severe acute |
T75673 | 211-222 | SP_7;UBERON:0001004 | denotes | respiratory |
T36620 | 223-245 | SP_7 | denotes | syndrome coronavirus 2 |
T18134 | 247-257 | SP_7 | denotes | SARS-CoV-2 |
T33325 | 369-377 | SP_7 | denotes | COVID-19 |
T75404 | 546-554 | SP_7 | denotes | COVID-19 |
T53069 | 587-598 | UBERON:0001004 | denotes | respiratory |
T43876 | 707-728 | UBERON:0004535 | denotes | cardiovascular system |
T85327 | 836-850 | UBERON:0004535 | denotes | cardiovascular |
T80970 | 913-926 | UBERON:0000948 | denotes | Transthoracic |
T33822 | 977-987 | UBERON:0002349 | denotes | myocardial |
T16632 | 1047-1063 | UBERON:0002084 | denotes | left ventricular |
T7327 | 1202-1210 | SP_7 | denotes | COVID-19 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T3 | 707-728 | Body_part | denotes | cardiovascular system | http://purl.org/sig/ont/fma/fma7161 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T4 | 707-728 | Body_part | denotes | cardiovascular system | http://purl.obolibrary.org/obo/UBERON_0004535 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T12 | 46-55 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T13 | 127-151 | Disease | denotes | coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T14 | 153-161 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T15 | 198-245 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T16 | 198-231 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T17 | 247-255 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T18 | 369-377 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T19 | 546-554 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T20 | 836-864 | Disease | denotes | cardiovascular disease (CVD) | http://purl.obolibrary.org/obo/MONDO_0004995 |
T21 | 1202-1210 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15 | 18-19 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T16 | 263-266 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T17 | 315-316 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T18 | 338-340 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T19 | 647-650 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T20 | 707-728 | http://purl.obolibrary.org/obo/UBERON_0004535 | denotes | cardiovascular system |
T21 | 707-728 | http://www.ebi.ac.uk/efo/EFO_0000791 | denotes | cardiovascular system |
T22 | 883-886 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T23 | 887-888 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T5 | 181-185 | Chemical | denotes | beta | http://purl.obolibrary.org/obo/CHEBI_10545 |
T6 | 877-882 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22 | 0-112 | Sentence | denotes | In December 2019, a wave of cases of atypical pneumonia emerged from Wuhan City, Hubei Province in China [1, 2]. |
T23 | 113-341 | Sentence | denotes | This disease (coronavirus disease 2019 (COVID-19)) is caused by the beta coronavirus severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and has rapidly spread around the world, being declared a pandemic since March 11. |
T24 | 342-536 | Sentence | denotes | Early reports suggest that COVID-19 is generally mild; nevertheless, up to 19% of cases will require in-hospital management, and 6% will need to be admitted to the intensive care unit (ICU) [3]. |
T25 | 537-735 | Sentence | denotes | Although COVID-19 manifests in most patients with respiratory symptoms, other presentations can occur, and it has been suggested that there could be direct damage to the cardiovascular system [4-6]. |
T26 | 736-912 | Sentence | denotes | In addition, increasing concern exists regarding the severity of the disease in patients with prior cardiovascular disease (CVD), since this group has a worse prognosis [7, 8]. |
T27 | 913-1129 | Sentence | denotes | Transthoracic echocardiography (TTE) allows us to detect subtle myocardial damage with tools that are associated with prognosis, e.g. left ventricular ejection fraction (LVEF) or global longitudinal strain (GLS) [9]. |
T28 | 1130-1211 | Sentence | denotes | Herein, we present the echocardiographic findings in four patients with COVID-19. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T6 | 46-55 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T7 | 836-858 | Phenotype | denotes | cardiovascular disease | http://purl.obolibrary.org/obo/HP_0001626 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
54 | 181-197 | Species | denotes | beta coronavirus | Tax:694002 |
55 | 198-245 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
56 | 247-257 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
57 | 573-581 | Species | denotes | patients | Tax:9606 |
58 | 816-824 | Species | denotes | patients | Tax:9606 |
59 | 1188-1196 | Species | denotes | patients | Tax:9606 |
60 | 46-55 | Disease | denotes | pneumonia | MESH:D011014 |
61 | 127-151 | Disease | denotes | coronavirus disease 2019 | MESH:C000657245 |
62 | 153-161 | Disease | denotes | COVID-19 | MESH:C000657245 |
63 | 369-377 | Disease | denotes | COVID-19 | MESH:C000657245 |
64 | 546-554 | Disease | denotes | COVID-19 | MESH:C000657245 |
65 | 587-607 | Disease | denotes | respiratory symptoms | MESH:D012818 |
66 | 836-858 | Disease | denotes | cardiovascular disease | MESH:D002318 |
67 | 860-863 | Disease | denotes | CVD | MESH:D002318 |
68 | 970-994 | Disease | denotes | subtle myocardial damage | MESH:D009202 |
69 | 1202-1210 | Disease | denotes | COVID-19 | MESH:C000657245 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32595812-32031570-18405858 | 106-107 | 32031570 | denotes | 1 |
32595812-32015507-18405859 | 109-110 | 32015507 | denotes | 2 |
32595812-32091533-18405860 | 533-534 | 32091533 | denotes | 3 |
32595812-31986264-18405861 | 730-731 | 31986264 | denotes | 4 |
32595812-32211816-18405861 | 730-731 | 32211816 | denotes | 4 |
32595812-32139904-18405862 | 909-910 | 32139904 | denotes | 8 |
32595812-30627581-18405863 | 1126-1127 | 30627581 | denotes | 9 |