PMC:7295558 / 12607-13862
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T112 | 124-131 | UBERON:0000948 | denotes | cardiac |
T113 | 162-172 | UBERON:0002349 | denotes | myocardial |
T114 | 269-279 | UBERON:0002349 | denotes | myocardial |
T115 | 334-342 | SP_7 | denotes | COVID-19 |
T116 | 353-363 | UBERON:0002349 | denotes | myocardial |
T117 | 442-451 | UBERON:0003126 | denotes | tricuspid |
T118 | 471-480 | UBERON:0003126 | denotes | tricuspid |
T119 | 517-522 | UBERON:0000178 | denotes | blood |
T120 | 582-590 | SP_10 | denotes | SARS-CoV |
T121 | 695-703 | SP_7 | denotes | COVID-19 |
T122 | 715-727 | GO:0050817 | denotes | coagulopathy |
T123 | 833-843 | GO:0007596 | denotes | thrombotic |
T124 | 875-883 | SP_7 | denotes | COVID-19 |
T125 | 892-901 | UBERON:0002048 | denotes | pulmonary |
T126 | 1045-1054 | UBERON:0002048 | denotes | pulmonary |
T127 | 1164-1182 | GO:0007596 | denotes | thromboprophylaxis |
T128 | 1216-1224 | UBERON:0010210 | denotes | thrombus |
T63600 | 124-131 | UBERON:0000948 | denotes | cardiac |
T61077 | 162-172 | UBERON:0002349 | denotes | myocardial |
T88255 | 269-279 | UBERON:0002349 | denotes | myocardial |
T99292 | 334-342 | SP_7 | denotes | COVID-19 |
T27430 | 353-363 | UBERON:0002349 | denotes | myocardial |
T28250 | 442-451 | UBERON:0003126 | denotes | tricuspid |
T15014 | 471-480 | UBERON:0003126 | denotes | tricuspid |
T8599 | 517-522 | UBERON:0000178 | denotes | blood |
T57055 | 582-590 | SP_10 | denotes | SARS-CoV |
T53160 | 695-703 | SP_7 | denotes | COVID-19 |
T45664 | 715-727 | GO:0050817 | denotes | coagulopathy |
T77693 | 833-843 | GO:0007596 | denotes | thrombotic |
T68410 | 875-883 | SP_7 | denotes | COVID-19 |
T1894 | 892-901 | UBERON:0002048 | denotes | pulmonary |
T50114 | 1045-1054 | UBERON:0002048 | denotes | pulmonary |
T22379 | 1164-1182 | GO:0007596 | denotes | thromboprophylaxis |
T60869 | 1216-1224 | UBERON:0010210 | denotes | thrombus |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T32 | 39-48 | Body_part | denotes | troponins | http://purl.org/sig/ont/fma/fma62338 |
T33 | 517-522 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T16 | 517-522 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T17 | 1241-1246 | Body_part | denotes | valve | http://purl.obolibrary.org/obo/UBERON_0003978 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T74 | 148-150 | Disease | denotes | CK | http://purl.obolibrary.org/obo/MONDO_0017941 |
T75 | 152-154 | Disease | denotes | CK | http://purl.obolibrary.org/obo/MONDO_0017941 |
T76 | 334-342 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T77 | 471-494 | Disease | denotes | tricuspid regurgitation | http://purl.obolibrary.org/obo/MONDO_0002870 |
T78 | 582-600 | Disease | denotes | SARS-CoV infection | http://purl.obolibrary.org/obo/MONDO_0005091 |
T79 | 591-600 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T80 | 622-634 | Disease | denotes | endocarditis | http://purl.obolibrary.org/obo/MONDO_0005025 |
T81 | 695-703 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T82 | 715-727 | Disease | denotes | coagulopathy | http://purl.obolibrary.org/obo/MONDO_0001531 |
T83 | 729-732 | Disease | denotes | CAC | http://purl.obolibrary.org/obo/MONDO_0001531 |
T84 | 751-769 | Disease | denotes | hypercoagulability | http://purl.obolibrary.org/obo/MONDO_0002305 |
T85 | 875-883 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T86 | 892-910 | Disease | denotes | pulmonary embolism | http://purl.obolibrary.org/obo/MONDO_0005279 |
T87 | 1216-1224 | Disease | denotes | thrombus | http://purl.obolibrary.org/obo/MONDO_0000831 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T134 | 155-157 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | MB |
T135 | 308-309 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T136 | 440-441 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T137 | 517-522 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T138 | 517-522 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
T139 | 693-694 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T140 | 770-773 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T141 | 819-820 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T142 | 947-948 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T143 | 1214-1215 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T144 | 1241-1246 | http://www.ebi.ac.uk/efo/EFO_0000825 | denotes | valve |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7 | 152-157 | http://purl.obolibrary.org/obo/GO_0004111 | denotes | CK-MB |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T145 | 0-212 | Sentence | denotes | In this series, serial measurements of troponins or D-dimer determination were not available, but increased levels of other cardiac markers such as CK, CK-MB and myocardial dysfunction detected by TTE were found. |
T146 | 213-257 | Sentence | denotes | None of our patients had previous known CVD. |
T147 | 258-415 | Sentence | denotes | Therefore, myocardial dysfunction could represent a direct manifestation of COVID-19, and also myocardial abnormalities seen in critically ill patients [13]. |
T148 | 416-532 | Sentence | denotes | One of our patients had a tricuspid vegetation, severe tricuspid regurgitation and repeated negative blood cultures. |
T149 | 533-666 | Sentence | denotes | Interestingly, previous reports in subjects with SARS-CoV infection show the presence of endocarditis with marantic vegetations [14]. |
T150 | 667-920 | Sentence | denotes | Recently, the presence of a COVID-19-associated coagulopathy (CAC) characterized by hypercoagulability has been proposed, and recent studies have found a presence of thrombotic events in 31% of subjects with COVID-19, mainly pulmonary embolism [15, 16]. |
T151 | 921-1119 | Sentence | denotes | We were unable to perform a pathologic evaluation of our subject’s vegetation for this report, and computed tomography (CT)-pulmonary angiography was not available because of his clinical condition. |
T152 | 1120-1255 | Sentence | denotes | Although all of our subjects were receiving thromboprophylaxis, the possibility of this being a thrombus attached to the valve remains. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T50 | 471-494 | Phenotype | denotes | tricuspid regurgitation | http://purl.obolibrary.org/obo/HP_0005180 |
T51 | 622-634 | Phenotype | denotes | endocarditis | http://purl.obolibrary.org/obo/HP_0100584 |
T52 | 715-727 | Phenotype | denotes | coagulopathy | http://purl.obolibrary.org/obo/HP_0003256 |
T53 | 729-732 | Phenotype | denotes | CAC | http://purl.obolibrary.org/obo/HP_0003256 |
T54 | 751-769 | Phenotype | denotes | hypercoagulability | http://purl.obolibrary.org/obo/HP_0100724 |
T55 | 892-910 | Phenotype | denotes | pulmonary embolism | http://purl.obolibrary.org/obo/HP_0002204 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
248 | 148-150 | Gene | denotes | CK | Gene:51727 |
249 | 225-233 | Species | denotes | patients | Tax:9606 |
250 | 401-409 | Species | denotes | patients | Tax:9606 |
251 | 427-435 | Species | denotes | patients | Tax:9606 |
252 | 162-184 | Disease | denotes | myocardial dysfunction | MESH:D009202 |
253 | 253-256 | Disease | denotes | CVD | MESH:D002318 |
254 | 269-291 | Disease | denotes | myocardial dysfunction | MESH:D009202 |
255 | 334-342 | Disease | denotes | COVID-19 | MESH:C000657245 |
256 | 353-377 | Disease | denotes | myocardial abnormalities | MESH:D009202 |
257 | 386-400 | Disease | denotes | critically ill | MESH:D016638 |
258 | 471-494 | Disease | denotes | tricuspid regurgitation | MESH:D014262 |
259 | 582-600 | Disease | denotes | SARS-CoV infection | MESH:C000657245 |
260 | 622-634 | Disease | denotes | endocarditis | MESH:D004696 |
261 | 695-703 | Disease | denotes | COVID-19 | MESH:C000657245 |
262 | 715-727 | Disease | denotes | coagulopathy | MESH:D001778 |
263 | 751-769 | Disease | denotes | hypercoagulability | MESH:D019851 |
264 | 833-843 | Disease | denotes | thrombotic | MESH:D013927 |
265 | 875-883 | Disease | denotes | COVID-19 | MESH:C000657245 |
266 | 892-910 | Disease | denotes | pulmonary embolism | MESH:D011655 |
267 | 1216-1224 | Disease | denotes | thrombus | MESH:D013927 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32595812-30521759-18405867 | 411-413 | 30521759 | denotes | 13 |
32595812-14736283-18405868 | 662-664 | 14736283 | denotes | 14 |
32595812-32302453-18405869 | 916-918 | 32302453 | denotes | 16 |