PMC:7294857 / 26988-28368
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T323 | 13-19 | UBERON:0001969 | denotes | plasma |
| T324 | 59-65 | UBERON:0001969 | denotes | plasma |
| T325 | 134-142 | SP_9 | denotes | MERS-CoV |
| T326 | 274-282 | SP_7 | denotes | COVID-19 |
| T327 | 460-466 | UBERON:0001969 | denotes | plasma |
| T328 | 634-642 | SP_7 | denotes | COVID-19 |
| T329 | 668-676 | GO:0042571 | denotes | antibody |
| T330 | 695-701 | UBERON:0001969 | denotes | plasma |
| T331 | 1057-1062 | NCBITaxon:10239 | denotes | viral |
| T332 | 1360-1364 | UBERON:0002048 | denotes | lung |
| T17497 | 13-19 | UBERON:0001969 | denotes | plasma |
| T49120 | 59-65 | UBERON:0001969 | denotes | plasma |
| T991 | 134-142 | SP_9 | denotes | MERS-CoV |
| T8881 | 274-282 | SP_7 | denotes | COVID-19 |
| T59412 | 460-466 | UBERON:0001969 | denotes | plasma |
| T39441 | 634-642 | SP_7 | denotes | COVID-19 |
| T50090 | 668-676 | GO:0042571 | denotes | antibody |
| T40740 | 695-701 | UBERON:0001969 | denotes | plasma |
| T93224 | 1057-1062 | NCBITaxon:10239 | denotes | viral |
| T59329 | 1360-1364 | UBERON:0002048 | denotes | lung |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T89 | 13-19 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
| T90 | 59-65 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
| T91 | 460-466 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
| T92 | 668-676 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
| T93 | 695-701 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
| T94 | 1360-1364 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T44 | 1360-1364 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T135 | 143-152 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T136 | 274-282 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T137 | 634-642 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T138 | 648-652 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T139 | 1354-1371 | Disease | denotes | acute lung injury | http://purl.obolibrary.org/obo/MONDO_0006502|http://purl.obolibrary.org/obo/MONDO_0015796 |
| T141 | 1365-1371 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T175 | 13-19 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
| T176 | 59-65 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
| T177 | 66-69 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T178 | 183-189 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T179 | 242-243 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T180 | 284-286 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T181 | 407-413 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | active |
| T182 | 452-454 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T183 | 460-466 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
| T184 | 552-553 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T185 | 695-701 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
| T186 | 843-844 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T187 | 1031-1032 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T188 | 1360-1364 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T189 | 1360-1364 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T89 | 1047-1054 | Phenotype | denotes | remia a | http://purl.obolibrary.org/obo/HP_0020071 |
| T90 | 1356-1373 | Phenotype | denotes | ute lung injury ( | http://www.orpha.net/ORDO/Orphanet_178320 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T222 | 0-45 | Sentence | denotes | Convalescent plasma and passive immunization: |
| T223 | 46-153 | Sentence | denotes | Convalescent plasma has already been in use for some diseases; it was also effective in MERS-CoV infection. |
| T224 | 154-288 | Sentence | denotes | Its safety and efficacy were tested by Arabi et al. and showed that it could be used as a potential treatment option in COVID-19 [27]. |
| T225 | 289-551 | Sentence | denotes | The WHO recently recommended its use as passive immunization in all serious patients because of the unavailability of active immunization in the form of vaccines [27].The plasma of recovered patients was used in different patients and had shown positive effects. |
| T226 | 552-702 | Sentence | denotes | A case review series by Shen et al. discussed five critically ill patients having COVID-19 with ARDS who were given antibody-rich convalescent plasma. |
| T227 | 703-861 | Sentence | denotes | They showed significant improvement in clinical status, their SOFA score improved, temperature improved, and they also were weaned off from a ventilator [28]. |
| T228 | 862-964 | Sentence | denotes | The results, however, cannot be considered as significantly reliable because of the small sample size. |
| T229 | 965-1134 | Sentence | denotes | Another case study showed significant improvement in symptoms and a decrease in viremia and viral load in seven out of 10 patients without any serious side effects [29]. |
| T230 | 1135-1252 | Sentence | denotes | Despite the positive results and considering that most of the studies had weak evidence, it can help manage patients. |
| T231 | 1253-1380 | Sentence | denotes | Still, more studies are needed to assess its potential serious side-effects like transfusion-related acute lung injury (TRALI). |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32550056-130-136-2286794 | 284-286 | ["26618098"] | denotes | 27 |
| 32550056-163-169-2286795 | 452-454 | ["26618098"] | denotes | 27 |
| 32550056-165-171-2286796 | 1130-1132 | ["32253318"] | denotes | 29 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32550056-26618098-23854250 | 284-286 | 26618098 | denotes | 27 |
| 32550056-26618098-23854251 | 452-454 | 26618098 | denotes | 27 |
| 32550056-32253318-23854252 | 1130-1132 | 32253318 | denotes | 29 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 681 | 365-373 | Species | denotes | patients | Tax:9606 |
| 682 | 480-488 | Species | denotes | patients | Tax:9606 |
| 683 | 511-519 | Species | denotes | patients | Tax:9606 |
| 684 | 618-626 | Species | denotes | patients | Tax:9606 |
| 685 | 1087-1095 | Species | denotes | patients | Tax:9606 |
| 686 | 1243-1251 | Species | denotes | patients | Tax:9606 |
| 687 | 134-152 | Disease | denotes | MERS-CoV infection | MESH:D018352 |
| 688 | 274-282 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 689 | 603-617 | Disease | denotes | critically ill | MESH:D016638 |
| 690 | 634-642 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 691 | 648-652 | Disease | denotes | ARDS | MESH:D012128 |
| 692 | 1045-1052 | Disease | denotes | viremia | MESH:D014766 |
| 693 | 1360-1371 | Disease | denotes | lung injury | MESH:D055370 |