PMC:7289100 / 3480-4661
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T12 | 709-726 | Body_part | denotes | connective tissue | http://purl.org/sig/ont/fma/fma9640 |
| T13 | 756-760 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T14 | 852-857 | Body_part | denotes | organ | http://purl.org/sig/ont/fma/fma67498 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T4 | 709-726 | Body_part | denotes | connective tissue | http://purl.obolibrary.org/obo/UBERON_0002384 |
| T5 | 720-726 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T6 | 756-760 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T7 | 852-857 | Body_part | denotes | organ | http://purl.obolibrary.org/obo/UBERON_0000062 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T49 | 114-135 | Disease | denotes | inflammatory diseases | http://purl.obolibrary.org/obo/MONDO_0021166 |
| T50 | 166-174 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T51 | 166-170 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T52 | 326-335 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T53 | 535-543 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T54 | 535-539 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T55 | 558-577 | Disease | denotes | respiratory failure | http://purl.obolibrary.org/obo/MONDO_0021113 |
| T56 | 678-682 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T57 | 709-734 | Disease | denotes | connective tissue disease | http://purl.obolibrary.org/obo/MONDO_0003900|http://purl.obolibrary.org/obo/MONDO_0005554 |
| T59 | 743-768 | Disease | denotes | interstitial lung disease | http://purl.obolibrary.org/obo/MONDO_0015925 |
| T60 | 756-768 | Disease | denotes | lung disease | http://purl.obolibrary.org/obo/MONDO_0005275 |
| T61 | 795-803 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T62 | 795-799 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T63 | 806-815 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T64 | 983-991 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T65 | 983-987 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T66 | 994-1003 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T67 | 1062-1080 | Disease | denotes | autoimmune disease | http://purl.obolibrary.org/obo/MONDO_0007179 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T37 | 3-6 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T38 | 190-191 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T39 | 233-234 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T40 | 471-472 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T41 | 482-484 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T42 | 709-726 | http://purl.obolibrary.org/obo/UBERON_0002384 | denotes | connective tissue |
| T43 | 709-726 | http://www.ebi.ac.uk/efo/EFO_0000952 | denotes | connective tissue |
| T44 | 756-760 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T45 | 756-760 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T46 | 842-843 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T47 | 852-857 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organ |
| T48 | 905-907 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T49 | 913-914 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T50 | 1024-1025 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5 | 473-478 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T29 | 326-335 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T30 | 519-531 | Phenotype | denotes | autoimmunity | http://purl.obolibrary.org/obo/HP_0002960 |
| T31 | 558-577 | Phenotype | denotes | respiratory failure | http://purl.obolibrary.org/obo/HP_0002878 |
| T32 | 743-768 | Phenotype | denotes | interstitial lung disease | http://purl.obolibrary.org/obo/HP_0006530 |
| T33 | 867-879 | Phenotype | denotes | autoimmunity | http://purl.obolibrary.org/obo/HP_0002960 |
| T34 | 994-1003 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T35 | 1062-1080 | Phenotype | denotes | autoimmune disease | http://purl.obolibrary.org/obo/HP_0002960 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T18 | 0-377 | Sentence | denotes | It has been suggested that the shared pathogenetic mechanisms and clinical-radiological aspects between the hyper-inflammatory diseases and Covid-19 may suggest that SARS-CoV-2 could act as a triggering factor for the development of a rapid autoimmune and/or autoinflammatory dysregulation, leading to the severe interstitial pneumonia, in genetic predisposed individuals [26]. |
| T19 | 378-578 | Sentence | denotes | Furthermore, in an online pre-published study from Germany the authors studied prospectively a group of 22 patients for the possible role of autoimmunity in SARS-CoV-2 -associated respiratory failure. |
| T20 | 579-909 | Sentence | denotes | Based on serological, radiological and histomorphological similarities between Covid-19-associated ARDS and acute exacerbation of connective tissue disease induced interstitial lung disease, the authors suggest that SARS-CoV-2 infection might trigger or simulate a form of organ specific autoimmunity in predisposed patients [27]. |
| T21 | 910-1181 | Sentence | denotes | In a similar retrospective study from China of 21 patients with critical SARS-CoV-2 pneumonia, the authors showed a prevalence of between 20 and 50% of autoimmune disease related autoantibodies, suggesting the rational for immunosupression in such cases of Covid-19 [28]. |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T69 | 140-148 | SP_7 | denotes | Covid-19 |
| T70 | 166-176 | SP_7 | denotes | SARS-CoV-2 |
| T71 | 241-251 | UBERON:0002405 | denotes | autoimmune |
| T72 | 276-289 | GO:0065007 | denotes | dysregulation |
| T73 | 313-325 | UBERON:0005169 | denotes | interstitial |
| T74 | 340-347 | SO:0000704 | denotes | genetic |
| T75 | 360-371 | NCBITaxon:1 | denotes | individuals |
| T76 | 535-545 | SP_7 | denotes | SARS-CoV-2 |
| T77 | 558-569 | UBERON:0001004 | denotes | respiratory |
| T78 | 658-666 | SP_7 | denotes | Covid-19 |
| T79 | 709-726 | UBERON:0002384 | denotes | connective tissue |
| T80 | 743-755 | UBERON:0005169 | denotes | interstitial |
| T81 | 756-760 | UBERON:0002048 | denotes | lung |
| T82 | 795-805 | SP_7 | denotes | SARS-CoV-2 |
| T83 | 852-857 | UBERON:0000062 | denotes | organ |
| T84 | 983-993 | SP_7 | denotes | SARS-CoV-2 |
| T85 | 1062-1072 | UBERON:0002405 | denotes | autoimmune |
| T86 | 1089-1103 | GO:0042571 | denotes | autoantibodies |
| T87 | 1167-1175 | SP_7 | denotes | Covid-19 |
| T15503 | 140-148 | SP_7 | denotes | Covid-19 |
| T24030 | 166-176 | SP_7 | denotes | SARS-CoV-2 |
| T85118 | 241-251 | UBERON:0002405 | denotes | autoimmune |
| T75819 | 276-289 | GO:0065007 | denotes | dysregulation |
| T41445 | 313-325 | UBERON:0005169 | denotes | interstitial |
| T67454 | 340-347 | SO:0000704 | denotes | genetic |
| T9657 | 360-371 | NCBITaxon:1 | denotes | individuals |
| T48049 | 535-545 | SP_7 | denotes | SARS-CoV-2 |
| T36327 | 558-569 | UBERON:0001004 | denotes | respiratory |
| T49541 | 658-666 | SP_7 | denotes | Covid-19 |
| T55349 | 709-726 | UBERON:0002384 | denotes | connective tissue |
| T28114 | 743-755 | UBERON:0005169 | denotes | interstitial |
| T77496 | 756-760 | UBERON:0002048 | denotes | lung |
| T55588 | 795-805 | SP_7 | denotes | SARS-CoV-2 |
| T72508 | 852-857 | UBERON:0000062 | denotes | organ |
| T73018 | 983-993 | SP_7 | denotes | SARS-CoV-2 |
| T73200 | 1062-1072 | UBERON:0002405 | denotes | autoimmune |
| T76547 | 1089-1103 | GO:0042571 | denotes | autoantibodies |
| T88308 | 1167-1175 | SP_7 | denotes | Covid-19 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 128 | 166-176 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 129 | 485-493 | Species | denotes | patients | Tax:9606 |
| 130 | 535-545 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 131 | 895-903 | Species | denotes | patients | Tax:9606 |
| 132 | 960-968 | Species | denotes | patients | Tax:9606 |
| 133 | 108-135 | Disease | denotes | hyper-inflammatory diseases | MESH:D007249 |
| 134 | 140-148 | Disease | denotes | Covid-19 | MESH:C000657245 |
| 135 | 326-335 | Disease | denotes | pneumonia | MESH:D011014 |
| 136 | 558-577 | Disease | denotes | respiratory failure | MESH:D012131 |
| 137 | 658-666 | Disease | denotes | Covid-19 | MESH:C000657245 |
| 138 | 678-682 | Disease | denotes | ARDS | MESH:D012128 |
| 139 | 743-768 | Disease | denotes | interstitial lung disease | MESH:D017563 |
| 140 | 795-815 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
| 141 | 983-1003 | Disease | denotes | SARS-CoV-2 pneumonia | MESH:C000657245 |
| 142 | 1062-1080 | Disease | denotes | autoimmune disease | MESH:D001327 |
| 143 | 1167-1175 | Disease | denotes | Covid-19 | MESH:C000657245 |