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PMC:7289100 / 27583-28327 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T95 333-338 Body_part denotes serum http://purl.org/sig/ont/fma/fma63083
T96 357-365 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T97 399-402 Body_part denotes IgG http://purl.org/sig/ont/fma/fma62872
T98 472-477 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T99 730-738 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T40 333-338 Body_part denotes serum http://purl.obolibrary.org/obo/UBERON_0001977

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T352 35-43 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T353 35-39 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T354 166-181 Disease denotes Rheumatic Fever http://purl.obolibrary.org/obo/MONDO_0017767
T355 333-347 Disease denotes serum sickness http://purl.obolibrary.org/obo/MONDO_0043789
T356 389-392 Disease denotes ADE http://purl.obolibrary.org/obo/MONDO_0019383
T357 433-448 Disease denotes virus infection http://purl.obolibrary.org/obo/MONDO_0005108
T358 439-448 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T359 525-531 Disease denotes Dengue http://purl.obolibrary.org/obo/MONDO_0005502
T360 621-624 Disease denotes ADE http://purl.obolibrary.org/obo/MONDO_0019383
T361 646-664 Disease denotes SARS-CoV infection http://purl.obolibrary.org/obo/MONDO_0005091
T362 646-650 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T363 655-664 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T221 59-60 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T222 255-256 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T223 433-438 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T224 452-454 http://purl.obolibrary.org/obo/CLO_0052676 denotes Fc
T225 472-477 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T122 730-738 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T177 176-181 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T178 243-248 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T12 115-124 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T179 0-478 Sentence denotes Other possible mechanisms by which SARS-CoV-2 could induce a hyperinflammatory syndrome are: i) the autoantibodies formation through “molecular mimicry”, as in Acute Rheumatic Fever (although this mechanism would not justify the occurrence of shock); ii) a vascular damage secondary to the deposition of immune-complexes as in acute serum sickness; iii) an antibody-dependent enhancement (ADE) with IgG immune complexes that enhance virus infection in Fc-receptor-bearing cells.
T180 479-620 Sentence denotes Intriguingly, this phenomenon is the cause of Dengue vascular permeability syndrome, which, again, shares some similarities with PeCOHS [78].
T181 621-744 Sentence denotes ADE were demonstrated in SARS-CoV infection years ago, mediated by antibodies directed to the envelope spike proteins [79].

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T389 35-45 SP_7 denotes SARS-CoV-2
T390 100-114 GO:0042571 denotes autoantibodies
T391 304-310 UBERON:0002405 denotes immune
T392 311-320 GO:0032991 denotes complexes
T393 333-338 UBERON:0001977 denotes serum
T394 357-365 GO:0042571 denotes antibody
T395 399-402 GO:0071735 denotes IgG
T396 403-409 UBERON:0002405 denotes immune
T397 410-419 GO:0032991 denotes complexes
T398 433-438 NCBITaxon:10239 denotes virus
T399 646-654 SP_10 denotes SARS-CoV
T400 688-698 GO:0042571 denotes antibodies
T401 715-723 GO:0031975 denotes envelope
T76353 35-45 SP_7 denotes SARS-CoV-2
T6122 100-114 GO:0042571 denotes autoantibodies
T45069 304-310 UBERON:0002405 denotes immune
T99998 311-320 GO:0032991 denotes complexes
T26306 333-338 UBERON:0001977 denotes serum
T68672 357-365 GO:0042571 denotes antibody
T8993 399-402 GO:0071735 denotes IgG
T23253 403-409 UBERON:0002405 denotes immune
T18082 410-419 GO:0032991 denotes complexes
T58686 433-438 NCBITaxon:10239 denotes virus
T31947 646-654 SP_10 denotes SARS-CoV
T57313 688-698 GO:0042571 denotes antibodies
T58548 715-723 GO:0031975 denotes envelope

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
954 35-45 Species denotes SARS-CoV-2 Tax:2697049
955 61-87 Disease denotes hyperinflammatory syndrome MESH:D061325
956 160-181 Disease denotes Acute Rheumatic Fever MESH:D012213
957 433-448 Disease denotes virus infection MESH:D001102
958 525-562 Disease denotes Dengue vascular permeability syndrome MESH:D003715
959 646-664 Disease denotes SARS-CoV infection MESH:C000657245

2_test

Id Subject Object Predicate Lexical cue
32535093-25073113-4828881 740-742 25073113 denotes 79