PMC:7279430 / 25116-27022
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T67 | 896-903 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T68 | 1132-1134 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T69 | 1312-1317 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T70 | 1349-1354 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T71 | 1536-1542 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T72 | 1543-1548 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T73 | 1651-1658 | Body_part | denotes | Protein | http://purl.org/sig/ont/fma/fma67257 |
T74 | 1728-1734 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T75 | 1735-1740 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T76 | 1870-1876 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T77 | 1877-1882 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T9 | 1536-1542 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T10 | 1728-1734 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T11 | 1870-1876 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1015 | 1255-1284 | Gene | denotes | angiotensin-converting enzyme | Gene:1636 |
1016 | 756-766 | Species | denotes | Adenovirus | Tax:10508 |
1017 | 772-793 | Species | denotes | Avian influenza virus | Tax:11309 |
1018 | 802-820 | Species | denotes | Bacillus anthracis | Tax:1392 |
1019 | 974-986 | Species | denotes | Dengue virus | Tax:12637 |
1014 | 1242-1247 | Gene | denotes | hACE2 | Gene:59272 |
1020 | 1006-1018 | Species | denotes | Dengue virus | Tax:12637 |
1021 | 1038-1050 | Species | denotes | Dengue virus | Tax:12637 |
1022 | 1070-1082 | Species | denotes | Dengue virus | Tax:12637 |
1023 | 1102-1117 | Species | denotes | Russell’s viper | Tax:8707 |
1024 | 1230-1241 | Species | denotes | Echovirus 9 | Tax:12060 |
1025 | 1249-1254 | Species | denotes | Human | Tax:9606 |
1026 | 1291-1296 | Species | denotes | Human | Tax:9606 |
1027 | 1325-1330 | Species | denotes | Human | Tax:9606 |
1028 | 1355-1359 | Species | denotes | HRSV | Tax:11250 |
1029 | 1361-1394 | Species | denotes | Human respiratory syncytial virus | Tax:11250 |
1030 | 1395-1400 | Species | denotes | HSV-1 | Tax:10298 |
1031 | 1402-1424 | Species | denotes | Herpes simplex virus 1 | Tax:10298 |
1032 | 1425-1430 | Species | denotes | HSV-2 | Tax:10310 |
1033 | 1432-1454 | Species | denotes | Herpes simplex virus 2 | Tax:10310 |
1034 | 1499-1510 | Species | denotes | Junin virus | Tax:11619 |
1035 | 1707-1727 | Species | denotes | African green monkey | Tax:9534 |
1036 | 1741-1751 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1037 | 1758-1805 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
1038 | 1849-1869 | Species | denotes | African green monkey | Tax:9534 |
1039 | 966-970 | Species | denotes | DENV | Tax:12637 |
1040 | 998-1004 | Species | denotes | DENV-2 | Tax:11060 |
1041 | 1030-1034 | Species | denotes | DENV | Tax:12637 |
1042 | 1062-1066 | Species | denotes | DENV | Tax:12637 |
1043 | 1883-1886 | Species | denotes | YFV | Tax:11089 |
1044 | 914-938 | Disease | denotes | Coronavirus disease 2019 | MESH:C000657245 |
1045 | 1306-1311 | Disease | denotes | tumor | MESH:D009369 |
1046 | 1678-1697 | Disease | denotes | Poliomyelitis virus | MESH:D011051 |
1047 | 1895-1900 | Disease | denotes | fever | MESH:D005334 |
1048 | 1222-1228 | CellLine | denotes | ECHO 9 | CVCL:1R14 |
1049 | 1285-1289 | CellLine | denotes | HeLa | CVCL:0030 |
1050 | 1318-1323 | CellLine | denotes | HEp-2 | CVCL:1906 |
1051 | 1511-1515 | CellLine | denotes | MDCK | CVCL:0422 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T140 | 772-787 | Disease | denotes | Avian influenza | http://purl.obolibrary.org/obo/MONDO_0018695 |
T141 | 778-787 | Disease | denotes | influenza | http://purl.obolibrary.org/obo/MONDO_0005812 |
T142 | 904-912 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T143 | 914-938 | Disease | denotes | Coronavirus disease 2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T144 | 974-980 | Disease | denotes | Dengue | http://purl.obolibrary.org/obo/MONDO_0005502 |
T145 | 1006-1012 | Disease | denotes | Dengue | http://purl.obolibrary.org/obo/MONDO_0005502 |
T146 | 1038-1044 | Disease | denotes | Dengue | http://purl.obolibrary.org/obo/MONDO_0005502 |
T147 | 1070-1076 | Disease | denotes | Dengue | http://purl.obolibrary.org/obo/MONDO_0005502 |
T148 | 1297-1311 | Disease | denotes | cervical tumor | http://purl.obolibrary.org/obo/MONDO_0021230 |
T149 | 1306-1311 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
T150 | 1402-1416 | Disease | denotes | Herpes simplex | http://purl.obolibrary.org/obo/MONDO_0004609 |
T151 | 1432-1446 | Disease | denotes | Herpes simplex | http://purl.obolibrary.org/obo/MONDO_0004609 |
T152 | 1549-1552 | Disease | denotes | MTT | http://purl.obolibrary.org/obo/MONDO_0016757 |
T153 | 1669-1674 | Disease | denotes | Polio | http://purl.obolibrary.org/obo/MONDO_0017373 |
T154 | 1678-1691 | Disease | denotes | Poliomyelitis | http://purl.obolibrary.org/obo/MONDO_0017373 |
T155 | 1741-1749 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T156 | 1758-1805 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T157 | 1758-1791 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
T158 | 1888-1900 | Disease | denotes | Yellow fever | http://purl.obolibrary.org/obo/MONDO_0020502 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T170 | 64-74 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activities |
T171 | 788-793 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T172 | 960-965 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T173 | 981-986 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T174 | 1013-1018 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T175 | 1045-1050 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T176 | 1077-1082 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T177 | 1132-1134 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T178 | 1249-1254 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Human |
T179 | 1285-1289 | http://purl.obolibrary.org/obo/CLO_0003684 | denotes | HeLa |
T180 | 1285-1289 | http://purl.obolibrary.org/obo/CLO_0050910 | denotes | HeLa |
T181 | 1291-1296 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Human |
T182 | 1312-1317 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T183 | 1318-1323 | http://purl.obolibrary.org/obo/CLO_0003707 | denotes | HEp-2 |
T184 | 1318-1323 | http://purl.obolibrary.org/obo/CLO_0050927 | denotes | HEp-2 |
T185 | 1325-1330 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Human |
T186 | 1331-1341 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
T187 | 1349-1354 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T188 | 1361-1366 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Human |
T189 | 1389-1394 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T190 | 1417-1422 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T191 | 1447-1452 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T192 | 1505-1510 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T193 | 1511-1515 | http://purl.obolibrary.org/obo/CLO_0007646 | denotes | MDCK |
T194 | 1511-1515 | http://purl.obolibrary.org/obo/CLO_0050861 | denotes | MDCK |
T195 | 1536-1542 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T196 | 1536-1542 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T197 | 1536-1542 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T198 | 1543-1548 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T199 | 1692-1697 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T200 | 1721-1727 | http://purl.obolibrary.org/obo/NCBITaxon_9479 | denotes | monkey |
T201 | 1728-1734 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T202 | 1728-1734 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T203 | 1728-1734 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T204 | 1735-1740 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T205 | 1843-1847 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
T206 | 1843-1847 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
T207 | 1863-1869 | http://purl.obolibrary.org/obo/NCBITaxon_9479 | denotes | monkey |
T208 | 1870-1876 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T209 | 1870-1876 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T210 | 1870-1876 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T211 | 1877-1882 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T212 | 1901-1906 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T400 | 271-277 | Chemical | denotes | formal | http://purl.obolibrary.org/obo/CHEBI_48341 |
T401 | 821-831 | Chemical | denotes | nicotinate | http://purl.obolibrary.org/obo/CHEBI_32544 |
T402 | 832-846 | Chemical | denotes | mononucleotide | http://purl.obolibrary.org/obo/CHEBI_29075 |
T403 | 896-903 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T404 | 1193-1204 | Chemical | denotes | L-aspartate | http://purl.obolibrary.org/obo/CHEBI_29991|http://purl.obolibrary.org/obo/CHEBI_29993 |
T406 | 1195-1204 | Chemical | denotes | aspartate | http://purl.obolibrary.org/obo/CHEBI_132943|http://purl.obolibrary.org/obo/CHEBI_29995|http://purl.obolibrary.org/obo/CHEBI_72314 |
T409 | 1255-1266 | Chemical | denotes | angiotensin | http://purl.obolibrary.org/obo/CHEBI_48433 |
T410 | 1549-1552 | Chemical | denotes | MTT | http://purl.obolibrary.org/obo/CHEBI_53233 |
T411 | 1607-1614 | Chemical | denotes | bromide | http://purl.obolibrary.org/obo/CHEBI_15858 |
T412 | 1651-1658 | Chemical | denotes | Protein | http://purl.obolibrary.org/obo/CHEBI_16541 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T11 | 1297-1311 | Phenotype | denotes | cervical tumor | http://purl.obolibrary.org/obo/HP_0030159 |
T12 | 1895-1900 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T181 | 0-15 | Sentence | denotes | Acknowledgments |
T182 | 16-152 | Sentence | denotes | W.N.S. participated in this work as part of the activities of the Aromatic Plant Research Center 237 (APRC, https://aromaticplant.org/). |
T183 | 154-174 | Sentence | denotes | Author Contributions |
T184 | 175-613 | Sentence | denotes | Conceptualization, J.K.R.d.S., K.G.B., and W.N.S.; methodology, J.K.R.d.S., K.G.B., and W.N.S.; formal analysis, W.N.S.; investigation, J.K.R.d.S., P.L.B.F., K.G.B., and W.N.S.; data curation, W.N.S.; writing—original draft preparation, J.K.R.d.S. and W.N.S.; writing—review and editing, J.K.R.d.S., P.L.B.F., K.G.B., and W.N.S.; project administration, W.N.S.; All authors have read and agreed to the published version of the manuscript. |
T185 | 615-622 | Sentence | denotes | Funding |
T186 | 623-666 | Sentence | denotes | This research received no external funding. |
T187 | 668-689 | Sentence | denotes | Conflicts of Interest |
T188 | 690-734 | Sentence | denotes | The authors declare no conflict of interest. |
T189 | 735-748 | Sentence | denotes | Abbreviations |
T190 | 749-766 | Sentence | denotes | Adeno Adenovirus |
T191 | 767-793 | Sentence | denotes | AIV Avian influenza virus |
T192 | 794-865 | Sentence | denotes | BaNadD Bacillus anthracis nicotinate mononucleotide adenylytransferase |
T193 | 866-903 | Sentence | denotes | BtOBP Bovine odorant binding protein |
T194 | 904-938 | Sentence | denotes | COVID-19 Coronavirus disease 2019 |
T195 | 939-965 | Sentence | denotes | Cox B1 Coxsackie B1 virus |
T196 | 966-997 | Sentence | denotes | DENV-1 Dengue virus serotype 1 |
T197 | 998-1029 | Sentence | denotes | DENV-2 Dengue virus serotype 2 |
T198 | 1030-1061 | Sentence | denotes | DENV-3 Dengue virus serotype 3 |
T199 | 1062-1093 | Sentence | denotes | DENV-4 Dengue virus serotype 4 |
T200 | 1094-1134 | Sentence | denotes | DrPLA2 Russell’s viper phospholipase A2 |
T201 | 1135-1167 | Sentence | denotes | DSnorm Normalized docking score |
T202 | 1168-1221 | Sentence | denotes | EcAspTA Esherichia coli L-aspartate aminotransferase |
T203 | 1222-1241 | Sentence | denotes | ECHO 9 Echovirus 9 |
T204 | 1242-1284 | Sentence | denotes | hACE2 Human angiotensin-converting enzyme |
T205 | 1285-1317 | Sentence | denotes | HeLa Human cervical tumor cells |
T206 | 1318-1354 | Sentence | denotes | HEp-2 Human epithelial type 2 cells |
T207 | 1355-1394 | Sentence | denotes | HRSV Human respiratory syncytial virus |
T208 | 1395-1424 | Sentence | denotes | HSV-1 Herpes simplex virus 1 |
T209 | 1425-1454 | Sentence | denotes | HSV-2 Herpes simplex virus 2 |
T210 | 1455-1492 | Sentence | denotes | IC50 Median inhibitory concentration |
T211 | 1493-1510 | Sentence | denotes | JUNV Junin virus |
T212 | 1511-1548 | Sentence | denotes | MDCK Madin-Darby canine kidney cells |
T213 | 1549-1614 | Sentence | denotes | MTT 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide |
T214 | 1615-1645 | Sentence | denotes | PCR Polymerase chain reaction |
T215 | 1646-1668 | Sentence | denotes | PDB Protein data bank |
T216 | 1669-1699 | Sentence | denotes | Polio 1 Poliomyelitis virus 1 |
T217 | 1700-1740 | Sentence | denotes | RC-37 African green monkey kidney cells |
T218 | 1741-1805 | Sentence | denotes | SARS-CoV-2 2019 severe acute respiratory syndrome coronavirus 2 |
T219 | 1806-1842 | Sentence | denotes | TcAChE Torpedo acetylcholinesterase |
T220 | 1843-1882 | Sentence | denotes | Vero African green monkey kidney cells |
T221 | 1883-1906 | Sentence | denotes | YFV Yellow fever virus |