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PMC:7279430 / 10047-11389 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T10 473-478 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T11 1081-1086 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
403 29-47 Species denotes yellow fever virus Tax:11089
404 157-163 Species denotes humans Tax:9606
405 440-458 Species denotes yellow fever virus Tax:11089
406 491-509 Species denotes Lippia origanoides Tax:542673
407 706-713 Species denotes L. alba Tax:320345
408 894-901 Species denotes L. alba Tax:320345
409 49-52 Species denotes YFV Tax:11089
410 135-138 Species denotes YFV Tax:11089
411 275-278 Species denotes YFV Tax:11089
412 460-463 Species denotes YFV Tax:11089
413 1057-1060 Species denotes YFV Tax:11089
414 357-371 Chemical denotes Essential oils MESH:D009822
415 877-890 Chemical denotes essential oil MESH:D009822
416 939-946 Chemical denotes carvone MESH:C006923
417 956-964 Chemical denotes limonene MESH:D000077222
418 978-1003 Chemical denotes bicyclosesquiphellandrene
419 1097-1100 Chemical denotes MTT MESH:C070243
420 1117-1130 Chemical denotes essential oil MESH:D009822
421 1199-1207 Chemical denotes limonene MESH:D000077222
422 7-12 Disease denotes fever MESH:D005334
423 114-133 Disease denotes infectious diseases MESH:D003141

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T65 0-12 Disease denotes Yellow fever http://purl.obolibrary.org/obo/MONDO_0020502
T66 14-16 Disease denotes YF http://purl.obolibrary.org/obo/MONDO_0020502
T67 29-41 Disease denotes yellow fever http://purl.obolibrary.org/obo/MONDO_0020502
T68 114-124 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T69 440-452 Disease denotes yellow fever http://purl.obolibrary.org/obo/MONDO_0020502
T70 1097-1100 Disease denotes MTT http://purl.obolibrary.org/obo/MONDO_0016757

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T82 42-47 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T83 55-58 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T84 157-163 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T85 168-178 http://purl.obolibrary.org/obo/NCBITaxon_7157 denotes mosquitoes
T86 301-302 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T87 425-431 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T88 453-458 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T89 468-472 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero
T90 468-472 http://purl.obolibrary.org/obo/CLO_0050515 denotes Vero
T91 473-478 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T92 631-632 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T93 743-744 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 907-908 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T95 1066-1072 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T96 1076-1080 http://purl.obolibrary.org/obo/CLO_0009524 denotes Vero
T97 1076-1080 http://purl.obolibrary.org/obo/CLO_0050515 denotes Vero
T98 1081-1086 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T99 1233-1234 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T130 14-16 Chemical denotes YF http://purl.obolibrary.org/obo/CHEBI_75005
T131 517-526 Chemical denotes carvacrol http://purl.obolibrary.org/obo/CHEBI_3440
T132 536-542 Chemical denotes thymol http://purl.obolibrary.org/obo/CHEBI_27607
T133 800-807 Chemical denotes carvone http://purl.obolibrary.org/obo/CHEBI_38265
T134 817-825 Chemical denotes limonene http://purl.obolibrary.org/obo/CHEBI_15384
T135 877-890 Chemical denotes essential oil http://purl.obolibrary.org/obo/CHEBI_83630
T136 939-946 Chemical denotes carvone http://purl.obolibrary.org/obo/CHEBI_38265
T137 956-964 Chemical denotes limonene http://purl.obolibrary.org/obo/CHEBI_15384
T138 1097-1100 Chemical denotes MTT http://purl.obolibrary.org/obo/CHEBI_53233
T139 1117-1130 Chemical denotes essential oil http://purl.obolibrary.org/obo/CHEBI_83630
T140 1162-1170 Chemical denotes geranial http://purl.obolibrary.org/obo/CHEBI_16980
T141 1180-1185 Chemical denotes neral http://purl.obolibrary.org/obo/CHEBI_16980|http://purl.obolibrary.org/obo/CHEBI_29020
T143 1199-1207 Chemical denotes limonene http://purl.obolibrary.org/obo/CHEBI_15384
T144 1275-1281 Chemical denotes citral http://purl.obolibrary.org/obo/CHEBI_23316

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T3 7-12 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T4 36-41 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T5 447-452 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T62 0-134 Sentence denotes Yellow fever (YF), caused by yellow fever virus (YFV), has historically been considered one of the most dangerous infectious diseases.
T63 135-225 Sentence denotes YFV is transmitted to humans via mosquitoes of the Haemogogus, Sabethes, and Aedes genera.
T64 226-356 Sentence denotes Annually, there are approximately 80,000–200,000 YFV cases worldwide, with a case fatality rate (CFR) ranging from 20–60% [93,94].
T65 357-479 Sentence denotes Essential oils of Lippia species and their main compounds have been tested against yellow fever virus (YFV) in Vero cells.
T66 480-666 Sentence denotes The oil of Lippia origanoides showed carvacrol (44.0%), thymol (15.0%), and γ-terpinene (10.0%) as the main compounds and displayed 100% inhibition at a concentration of 11.1 μg/mL [43].
T67 667-774 Sentence denotes However, in the same study, the oil of L. alba displayed 100% inhibition at a concentration of 100.0 μg/mL.
T68 775-872 Sentence denotes The major compounds were carvone (51.0%), limonene (33.0%), and bicyclosesquiphellandrene (7.0%).
T69 873-1112 Sentence denotes The essential oil of L. alba with a similar chemical composition, carvone (39.7%), limonene (30.6%), and bicyclosesquiphellandrene (8.9%), displayed an IC50 value of 4.3 μg/mL against YFV when tested in Vero cells using the MTT assay [62].
T70 1113-1342 Sentence denotes The essential oil of L. citriodora, dominated by geranial (18.9%), neral (15.6%), and limonene (10.7%), did not display a statistical difference in comparison to citral, with IC50 values of 19.4 and 17.6 μg/mL, respectively [62].

2_test

Id Subject Object Predicate Lexical cue
32408699-27400066-52981856 349-351 27400066 denotes 93
32408699-29933925-52981857 352-354 29933925 denotes 94
32408699-19267922-52981858 662-664 19267922 denotes 43
32408699-23513741-52981859 1108-1110 23513741 denotes 62
32408699-23513741-52981860 1338-1340 23513741 denotes 62
T38573 349-351 27400066 denotes 93
T71953 352-354 29933925 denotes 94
T85002 662-664 19267922 denotes 43
T2914 1108-1110 23513741 denotes 62
T788 1338-1340 23513741 denotes 62