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PMC:7278709 / 48070-48496 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T347 27-37 Body_part denotes tryptophan http://purl.org/sig/ont/fma/fma82767
T348 150-162 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T349 398-405 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T124 52-60 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T125 111-119 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T126 125-128 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T128 264-267 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T130 271-279 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T475 122-124 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T476 178-184 http://purl.obolibrary.org/obo/SO_0000418 denotes signal
T477 185-192 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T478 261-263 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T479 319-320 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T705 27-37 Chemical denotes tryptophan http://purl.obolibrary.org/obo/CHEBI_16828|http://purl.obolibrary.org/obo/CHEBI_27897|http://purl.obolibrary.org/obo/CHEBI_57719|http://purl.obolibrary.org/obo/CHEBI_57912
T709 150-162 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T710 185-192 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T711 398-405 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T285 0-235 Sentence denotes The possible importance of tryptophan in binding in SARS-CoV-2 is exemplified in the following sequence of the SARS-CoV-2 S1-NTD section of the spike glycoprotein (including the signal peptide, in order to conserve standard numbering).
T286 236-426 Sentence denotes The sequence is from the S1-NTD of SARS-CoV-2 GenBank entry MN908947.3, along with a brief description of accessibility in PDB entry 6VVX, which is for the spike protein in the closed state.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
948 392-397 Gene denotes spike Gene:43740568
949 52-62 Species denotes SARS-CoV-2 Tax:2697049
950 111-121 Species denotes SARS-CoV-2 Tax:2697049
951 271-281 Species denotes SARS-CoV-2 Tax:2697049
952 27-37 Chemical denotes tryptophan MESH:D014364
953 296-306 CellLine denotes MN908947.3 CVCL:U508