PMC:7275124 / 7357-7800 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"158","span":{"begin":203,"end":205},"obj":"Chemical"},{"id":"159","span":{"begin":434,"end":442},"obj":"Chemical"},{"id":"187","span":{"begin":8,"end":28},"obj":"Disease"},{"id":"188","span":{"begin":68,"end":77},"obj":"Disease"},{"id":"189","span":{"begin":88,"end":101},"obj":"Disease"},{"id":"190","span":{"begin":229,"end":244},"obj":"Disease"},{"id":"191","span":{"begin":246,"end":257},"obj":"Disease"},{"id":"192","span":{"begin":259,"end":275},"obj":"Disease"},{"id":"193","span":{"begin":277,"end":288},"obj":"Disease"},{"id":"194","span":{"begin":372,"end":388},"obj":"Disease"},{"id":"195","span":{"begin":390,"end":398},"obj":"Disease"},{"id":"196","span":{"begin":400,"end":418},"obj":"Disease"}],"attributes":[{"id":"A158","pred":"tao:has_database_id","subj":"158","obj":"MESH:D010100"},{"id":"A159","pred":"tao:has_database_id","subj":"159","obj":"MESH:D007773"},{"id":"A187","pred":"tao:has_database_id","subj":"187","obj":"MESH:D009102"},{"id":"A188","pred":"tao:has_database_id","subj":"188","obj":"MESH:D007239"},{"id":"A189","pred":"tao:has_database_id","subj":"189","obj":"MESH:D009102"},{"id":"A190","pred":"tao:has_database_id","subj":"190","obj":"MESH:D001002"},{"id":"A191","pred":"tao:has_database_id","subj":"191","obj":"MESH:D013610"},{"id":"A192","pred":"tao:has_database_id","subj":"192","obj":"MESH:D000067390"},{"id":"A193","pred":"tao:has_database_id","subj":"193","obj":"MESH:D007022"},{"id":"A194","pred":"tao:has_database_id","subj":"194","obj":"MESH:D013921"},{"id":"A195","pred":"tao:has_database_id","subj":"195","obj":"MESH:D000138"},{"id":"A196","pred":"tao:has_database_id","subj":"196","obj":"MESH:D006932"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T11","span":{"begin":15,"end":20},"obj":"Body_part"},{"id":"T12","span":{"begin":88,"end":93},"obj":"Body_part"},{"id":"T13","span":{"begin":118,"end":124},"obj":"Body_part"},{"id":"T14","span":{"begin":264,"end":275},"obj":"Body_part"}],"attributes":[{"id":"A11","pred":"fma_id","subj":"T11","obj":"http://purl.org/sig/ont/fma/fma67498"},{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma67498"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma264279"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma7182"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T10","span":{"begin":15,"end":20},"obj":"Body_part"},{"id":"T11","span":{"begin":88,"end":93},"obj":"Body_part"}],"attributes":[{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0000062"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T57","span":{"begin":68,"end":77},"obj":"Disease"},{"id":"T58","span":{"begin":238,"end":244},"obj":"Disease"},{"id":"T59","span":{"begin":277,"end":288},"obj":"Disease"},{"id":"T60","span":{"begin":372,"end":388},"obj":"Disease"},{"id":"T61","span":{"begin":390,"end":398},"obj":"Disease"},{"id":"T62","span":{"begin":400,"end":418},"obj":"Disease"}],"attributes":[{"id":"A57","pred":"mondo_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A58","pred":"mondo_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/MONDO_0002476"},{"id":"A59","pred":"mondo_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/MONDO_0005468"},{"id":"A60","pred":"mondo_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/MONDO_0002049"},{"id":"A61","pred":"mondo_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/MONDO_0006022"},{"id":"A62","pred":"mondo_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/MONDO_0002408"},{"id":"A63","pred":"mondo_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/MONDO_0024288"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T53","span":{"begin":15,"end":20},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T54","span":{"begin":88,"end":93},"obj":"http://purl.obolibrary.org/obo/UBERON_0003103"},{"id":"T55","span":{"begin":264,"end":275},"obj":"http://www.ebi.ac.uk/efo/EFO_0000876"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T5","span":{"begin":203,"end":205},"obj":"Chemical"},{"id":"T6","span":{"begin":434,"end":442},"obj":"Chemical"}],"attributes":[{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_15379"},{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_24997"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T2","span":{"begin":158,"end":169},"obj":"http://purl.obolibrary.org/obo/GO_0045333"},{"id":"T3","span":{"begin":158,"end":169},"obj":"http://purl.obolibrary.org/obo/GO_0007585"},{"id":"T4","span":{"begin":359,"end":370},"obj":"http://purl.obolibrary.org/obo/GO_0050817"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-sentences","denotations":[{"id":"T66","span":{"begin":0,"end":78},"obj":"Sentence"},{"id":"T67","span":{"begin":79,"end":443},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T23","span":{"begin":8,"end":14},"obj":"Phenotype"},{"id":"T24","span":{"begin":229,"end":237},"obj":"Phenotype"},{"id":"T25","span":{"begin":238,"end":244},"obj":"Phenotype"},{"id":"T26","span":{"begin":246,"end":257},"obj":"Phenotype"},{"id":"T27","span":{"begin":277,"end":288},"obj":"Phenotype"},{"id":"T28","span":{"begin":372,"end":388},"obj":"Phenotype"},{"id":"T29","span":{"begin":390,"end":398},"obj":"Phenotype"},{"id":"T30","span":{"begin":400,"end":418},"obj":"Phenotype"}],"attributes":[{"id":"A23","pred":"hp_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/HP_0100806"},{"id":"A24","pred":"hp_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/HP_0100520"},{"id":"A25","pred":"hp_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/HP_0100519"},{"id":"A26","pred":"hp_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/HP_0001649"},{"id":"A27","pred":"hp_id","subj":"T27","obj":"http://purl.obolibrary.org/obo/HP_0002615"},{"id":"A28","pred":"hp_id","subj":"T28","obj":"http://purl.obolibrary.org/obo/HP_0001873"},{"id":"A29","pred":"hp_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/HP_0001941"},{"id":"A30","pred":"hp_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/HP_0002904"}],"text":"Stage 5 Sepsis Organ failure caused by deregulated host response to infection. Signs of organ failure include altered mental status, difficult or superficial respiration, increased respiratory rate, low O2 peripheral saturation, oliguria/anuria, tachycardia, cold extremities, hypotension, and cutaneous alterations, and laboratory findings including altered coagulation, thrombocytopenia, acidosis, hyperbilirubinemia, and increased lactates."}