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PMC:7272971 / 9727-10654 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
329 201-205 Gene denotes ACE2 Gene:59272
330 350-357 Gene denotes TMPRSS2 Gene:7113
331 366-371 Gene denotes spike Gene:43740568
332 395-399 Gene denotes ACE2 Gene:59272
333 429-434 Gene denotes CD209 Gene:30835
334 94-107 Species denotes Coronaviruses Tax:11118
335 127-132 Species denotes human Tax:9606
336 194-199 Species denotes CoV‐2 Tax:2697049
337 524-532 Species denotes MERS‐CoV Tax:1335626
338 133-152 Disease denotes CoV disease Ocular MESH:C000657245
339 244-253 Disease denotes infection MESH:D007239
340 299-317 Disease denotes corneal epithelium MESH:D003316
341 468-485 Disease denotes corneal dendritic MESH:D003316
342 577-586 Disease denotes infection MESH:D007239
343 694-715 Disease denotes palpebral conjunctiva MESH:C563620
347 23-33 Species denotes SARS‐CoV‐2 Tax:2697049
348 35-43 Species denotes SARS‐CoV Tax:694009
349 48-56 Species denotes MERS‐CoV Tax:1335626

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T68 77-93 Body_part denotes surface and lung http://purl.org/sig/ont/fma/fma17530
T69 89-93 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T70 162-166 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T71 175-179 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T72 212-216 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T73 271-281 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T74 286-297 Body_part denotes fibroblasts http://purl.org/sig/ont/fma/fma63877
T75 299-317 Body_part denotes corneal epithelium http://purl.org/sig/ont/fma/fma58263
T76 307-317 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T77 333-342 Body_part denotes epithelia http://purl.org/sig/ont/fma/fma9639
T78 372-379 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T79 414-424 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T80 436-440 Body_part denotes Cell http://purl.org/sig/ont/fma/fma68646
T81 444-448 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T82 476-491 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T83 486-491 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T84 508-519 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T85 545-549 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T86 615-626 Body_part denotes endothelium http://purl.org/sig/ont/fma/fma63916
T87 635-639 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T88 640-649 Body_part denotes epithelia http://purl.org/sig/ont/fma/fma9639
T89 694-715 Body_part denotes palpebral conjunctiva http://purl.org/sig/ont/fma/fma59025
T90 738-757 Body_part denotes alveolar epithelium http://purl.org/sig/ont/fma/fma63915
T91 747-757 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T92 871-877 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T93 920-926 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T11 89-93 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 175-179 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T13 271-281 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T14 299-317 Body_part denotes corneal epithelium http://purl.obolibrary.org/obo/UBERON_0001772
T15 307-317 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T16 333-342 Body_part denotes epithelia http://purl.obolibrary.org/obo/UBERON_0000483
T17 414-424 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T18 615-626 Body_part denotes endothelium http://purl.obolibrary.org/obo/UBERON_0001986
T19 635-639 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T20 640-649 Body_part denotes epithelia http://purl.obolibrary.org/obo/UBERON_0000483
T21 694-715 Body_part denotes palpebral conjunctiva http://purl.obolibrary.org/obo/UBERON_0001812
T22 704-715 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T23 747-757 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T24 871-877 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T25 920-926 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T58 23-27 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T59 35-39 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T60 180-184 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T61 189-193 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T62 244-253 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T63 577-586 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T100 89-93 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T101 89-93 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T102 127-132 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T103 162-172 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T104 175-179 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T105 175-179 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T106 212-216 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T107 271-281 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T108 286-297 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T109 307-317 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T110 326-332 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T111 407-413 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T112 414-424 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T113 426-428 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T114 436-440 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell
T115 444-448 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T116 476-491 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T117 493-495 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T118 521-523 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T119 545-549 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T120 615-626 http://purl.obolibrary.org/obo/UBERON_0001986 denotes endothelium
T121 635-639 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T122 635-639 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T123 704-715 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T124 704-715 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T125 747-757 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T126 778-781 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T42 372-379 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T43 676-678 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T67 0-93 Sentence denotes Table 1 Comparison of SARS‐CoV‐2, SARS‐CoV and MERS‐CoV receptors on ocular surface and lung
T68 94-179 Sentence denotes Coronaviruses Receptor Role in human CoV disease Ocular surface (cell types) Lung
T69 180-188 Sentence denotes SARS‐CoV
T70 189-349 Sentence denotes SARS‐CoV‐2 ACE2 Host cell receptor and essential for infection + (conjunctival epithelium and fibroblasts; corneal epithelium) 31 + (airway epithelia)32, 33
T71 350-428 Sentence denotes TMPRSS2 Primes spike protein for binding to ACE2 – + (airway epithelium) 34
T72 429-523 Sentence denotes CD209 Cell‐to‐cell viral transfer + (corneal dendritic cells) 35 + (alveola macrophages) 36
T73 524-668 Sentence denotes MERS‐CoV CD26 Host cell receptor and essential for infection +/− (conjunctival vascular endothelium) 37 + (lung epithelia and endothelia) 38
T74 669-761 Sentence denotes CD66e Co‐receptor +/− (palpebral conjunctiva) 39 + (bronchial and alveolar epithelium) 32
T75 762-927 Sentence denotes +: the receptor has been found, −: there are no reports of the receptor on the ocular surface, +/−: found in tissue but only on non‐virally‐mediated inflamed tissue.