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PMC:7272971 / 7038-7920 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
189 779-784 Gene denotes spike Gene:43740568
190 14-27 Species denotes Coronaviruses Tax:11118
191 95-101 Species denotes humans Tax:9606
192 121-126 Species denotes Human Tax:9606
193 127-140 Species denotes coronaviruses Tax:11118
194 141-150 Species denotes hCoV‐229E Tax:11137
195 302-315 Species denotes coronaviruses Tax:11118
196 352-358 Species denotes humans Tax:9606
197 361-369 Species denotes SARS‐CoV Tax:694009
198 384-392 Species denotes MERS‐CoV Tax:1335626
199 419-429 Species denotes SARS‐CoV‐2 Tax:2697049
200 454-467 Species denotes Coronaviruses Tax:11118
201 559-563 Species denotes cows Tax:9913
202 623-627 Species denotes cats Tax:9685
203 757-770 Species denotes Coronaviruses Tax:11118
204 158-162 Species denotes NL63 Tax:277944
205 168-172 Species denotes HKU1 Tax:290028
206 572-580 Species denotes chickens Tax:9031
207 822-827 Chemical denotes lipid MESH:D008055
208 194-214 Disease denotes respiratory diseases MESH:D012140
209 338-348 Disease denotes infections MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T30 677-682 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T31 723-728 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T32 785-792 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T33 822-827 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T34 874-879 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T41 194-214 Disease denotes respiratory diseases http://purl.obolibrary.org/obo/MONDO_0005087
T42 338-351 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T43 361-365 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T44 419-423 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T58 32-33 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T59 60-67 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T60 95-101 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T61 112-119 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T62 121-126 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T63 352-358 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T64 543-550 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T65 564-566 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T66 607-614 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T67 639-646 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T68 677-682 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T69 723-728 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T70 874-879 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T13 51-56 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T14 785-792 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T15 822-827 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T47 0-13 Sentence denotes Coronaviruses
T48 14-120 Sentence denotes Coronaviruses are a relatively large group of viruses that can cause diseases in humans and other animals.
T49 121-286 Sentence denotes Human coronaviruses hCoV‐229E, OC43, NL63, and HKU1 typically cause mild respiratory diseases, are seasonal (peaking in the winter) and have been around for decades.
T50 287-453 Sentence denotes More recently, coronaviruses which can cause fatal infections in humans – SARS‐CoV in 2002–2003, MERS‐CoV in 2012 10 and of course SARS‐CoV‐2 in 2019 – have emerged.
T51 454-756 Sentence denotes Coronaviruses also cause large economic losses as they can cause severe diseases in farm animals such as cows 11 and chickens12, 13 as well as domestic animals such as cats.14, 15 All viruses need to bind (adhere) to host cells, as the first step in their invasion of cells and subsequent replication.
T52 757-880 Sentence denotes Coronaviruses use the spike protein that protrudes through their lipid envelope to bind to various receptors on host cells.
T53 881-882 Sentence denotes 3