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PMC:7271924 / 30135-31050 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T544 48-61 SO:0000409 denotes binding sites
T545 69-79 SP_7 denotes SARS-CoV-2
T546 92-100 SP_7 denotes COVID-19
T547 139-149 SP_7 denotes SARS-CoV-2
T548 168-197 CHEBI:24499;CHEBI:24499 denotes Heparan sulfate proteoglycans
T549 276-281 NCBITaxon:10239 denotes virus
T550 301-306 NCBITaxon:10239 denotes virus
T551 314-326 GO:0009986 denotes cell surface
T552 358-363 NCBITaxon:10239 denotes virus
T553 386-390 G_3;PG_10;PR:000003622 denotes ACE2
T554 477-488 GO:0006260 denotes replication
T555 556-567 PR:000009978 denotes Lactoferrin
T556 631-635 G_3;PG_10;PR:000003622 denotes ACE2
T557 659-670 PR:000009978 denotes lactoferrin
T558 676-687 PR:000009978 denotes Lactoferrin
T559 711-715 PR:000014459;SP_7 denotes SARS
T560 715-721 SP_7 denotes -CoV-2
T561 781-791 SP_7 denotes SARS-CoV-2
T562 835-853 GO:0033644 denotes host cell membrane
T563 855-863 SP_7 denotes COVID-19
T72810 48-61 SO:0000409 denotes binding sites
T35553 69-79 SP_7 denotes SARS-CoV-2
T97132 92-100 SP_7 denotes COVID-19
T67819 139-149 SP_7 denotes SARS-CoV-2
T34731 168-197 CHEBI:24499;CHEBI:24499 denotes Heparan sulfate proteoglycans
T11160 276-281 NCBITaxon:10239 denotes virus
T78505 301-306 NCBITaxon:10239 denotes virus
T90756 314-326 GO:0009986 denotes cell surface
T54560 358-363 NCBITaxon:10239 denotes virus
T72876 386-390 G_3;PG_10;PR:000003622 denotes ACE2
T96834 477-488 GO:0006260 denotes replication
T36697 556-567 PR:000009978 denotes Lactoferrin
T86359 631-635 G_3;PG_10;PR:000003622 denotes ACE2
T42997 659-670 PR:000009978 denotes lactoferrin
T49171 676-687 PR:000009978 denotes Lactoferrin
T95006 711-715 PR:000014459;SP_7 denotes SARS
T3005 715-721 SP_7 denotes -CoV-2
T14660 781-791 SP_7 denotes SARS-CoV-2
T97248 835-853 GO:0033644 denotes host cell membrane
T13325 855-863 SP_7 denotes COVID-19

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
779 23-34 Gene denotes lactoferrin Gene:280846
780 386-390 Gene denotes ACE2 Gene:59272
781 556-567 Gene denotes Lactoferrin Gene:280846
782 631-635 Gene denotes ACE2 Gene:59272
783 659-670 Gene denotes lactoferrin Gene:280846
784 676-687 Gene denotes Lactoferrin Gene:280846
785 845-853 Gene denotes membrane Gene:43740571
786 69-79 Species denotes SARS-CoV-2 Tax:2697049
787 139-149 Species denotes SARS-CoV-2 Tax:2697049
788 711-721 Species denotes SARS-CoV-2 Tax:2697049
789 781-791 Species denotes SARS-CoV-2 Tax:2697049
791 92-100 Disease denotes COVID-19 MESH:C000657245
792 855-863 Disease denotes COVID-19 MESH:C000657245
793 864-873 Disease denotes infection MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T340 122-127 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T341 168-197 Body_part denotes Heparan sulfate proteoglycans http://purl.org/sig/ont/fma/fma82834
T342 168-183 Body_part denotes Heparan sulfate http://purl.org/sig/ont/fma/fma63023
T343 168-175 Body_part denotes Heparan http://purl.org/sig/ont/fma/fma67110
T344 199-204 Body_part denotes HSPGs http://purl.org/sig/ont/fma/fma82834
T345 263-267 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T346 314-326 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T347 314-318 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T348 446-454 Body_part denotes clathrin http://purl.org/sig/ont/fma/fma62262
T349 516-520 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T350 592-597 Body_part denotes HSPGs http://purl.org/sig/ont/fma/fma82834
T351 736-740 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T352 840-853 Body_part denotes cell membrane http://purl.org/sig/ont/fma/fma63841
T353 840-844 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T114 69-77 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T115 92-100 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T116 139-147 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T117 711-719 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T118 781-789 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T119 855-863 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T120 864-873 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T404 122-127 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T405 168-197 http://purl.obolibrary.org/obo/PR_000001307 denotes Heparan sulfate proteoglycans
T406 199-204 http://purl.obolibrary.org/obo/PR_000001307 denotes HSPGs
T407 263-267 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T408 276-281 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T409 301-306 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T410 314-318 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T411 358-363 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T412 471-476 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T413 516-520 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T414 592-597 http://purl.obolibrary.org/obo/PR_000001307 denotes HSPGs
T415 644-645 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T416 736-740 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T417 840-844 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T418 845-853 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T359 168-183 Chemical denotes Heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T360 176-183 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T361 184-197 Chemical denotes proteoglycans http://purl.obolibrary.org/obo/CHEBI_37396

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T66 106-121 http://purl.obolibrary.org/obo/GO_0044409 denotes Entry into host

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T237 207-854 Sentence denotes This attachment initiates the first contact between the cell and the virus, concentrating the virus on the cell surface, (4) followed attaching of the virus to the host receptor (ACE2) and association and entering are then facilitated via clathrin-coated pits (5) Virus replication can then happen inside the cell. (6) One of the characteristics of Lactoferrin, is that it attaches to HSPGs. (7) Currently we do not know if ACE2 is also a receptor for lactoferrin. (8) Lactoferrin may block the entry of SARS-CoV-2 into the host cell, by occupying HPSGs, thereby preventing SARS-CoV-2 initial attachment and accumulation on the host cell membrane.
T238 855-915 Sentence denotes COVID-19 infection template adjusted from www.biorender.com.

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T6 168-183 GlycoEpitope denotes Heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086