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PMC:7271924 / 21279-22358 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T416 9-17 SP_10 denotes SARS-CoV
T417 56-67 UBERON:0001004;GO:0045333 denotes respiratory
T418 119-123 G_3;PG_10;PR:000003622 denotes ACE2
T419 152-160 GO:0016020 denotes membrane
T420 207-218 UBERON:0001004;GO:0045333 denotes respiratory
T421 219-226 NCBITaxon:10239 denotes viruses
T422 246-255 GO:0010467 denotes expressed
T423 259-266 UBERON:0000479 denotes tissues
T424 278-295 UBERON:0000065 denotes respiratory tract
T425 310-318 SP_7 denotes COVID-19
T426 330-334 PR:000014459;SP_7 denotes SARS
T427 334-340 SP_7 denotes -CoV-2
T428 372-376 PR:000003622;G_3;PG_10 denotes ACE2
T429 393-397 G_3;PG_10;PR:000003622 denotes ACE2
T430 408-417 GO:0010467 denotes expressed
T431 421-426 SP_6;NCBITaxon:9606 denotes human
T432 427-431 CL:0000082;UBERON:0002048 denotes lung
T433 432-451 UBERON:0000115;CL:0000322 denotes alveolar epithelial
T434 452-457 CL:0000322 denotes cells
T435 459-470 CL:0000584 denotes enterocytes
T436 478-493 UBERON:0002108 denotes small intestine
T437 503-515 UBERON:0012427 denotes brush border
T438 553-559 UBERON:0002113 denotes kidney
T439 604-617 SO:0000409 denotes docking sites
T440 630-642 GO:0044228 denotes cell surface
T441 688-696 SP_10 denotes SARS-CoV
T442 697-707 GO:0035376 denotes cell entry
T443 761-771 SP_7 denotes SARS-CoV-2
T444 824-832 SP_10 denotes SARS-CoV
T445 905-909 G_3;PG_10;PR:000003622 denotes ACE2
T446 951-961 SP_7 denotes SARS-CoV-2
T447 1031-1039 SP_10 denotes SARS-CoV
T36857 9-17 SP_10 denotes SARS-CoV
T82961 56-67 UBERON:0001004;GO:0045333 denotes respiratory
T37184 119-123 G_3;PG_10;PR:000003622 denotes ACE2
T73164 152-160 GO:0016020 denotes membrane
T40029 207-218 UBERON:0001004;GO:0045333 denotes respiratory
T11986 219-226 NCBITaxon:10239 denotes viruses
T77571 246-255 GO:0010467 denotes expressed
T60480 259-266 UBERON:0000479 denotes tissues
T70545 278-295 UBERON:0000065 denotes respiratory tract
T92998 310-318 SP_7 denotes COVID-19
T48345 330-334 PR:000014459;SP_7 denotes SARS
T69502 334-340 SP_7 denotes -CoV-2
T80946 372-376 PR:000003622;G_3;PG_10 denotes ACE2
T86602 393-397 G_3;PG_10;PR:000003622 denotes ACE2
T18644 408-417 GO:0010467 denotes expressed
T21091 421-426 SP_6;NCBITaxon:9606 denotes human
T55007 427-431 CL:0000082;UBERON:0002048 denotes lung
T7874 432-451 UBERON:0000115;CL:0000322 denotes alveolar epithelial
T82482 452-457 CL:0000322 denotes cells
T72052 459-470 CL:0000584 denotes enterocytes
T99570 478-493 UBERON:0002108 denotes small intestine
T51361 503-515 UBERON:0012427 denotes brush border
T41879 553-559 UBERON:0002113 denotes kidney
T58249 604-617 SO:0000409 denotes docking sites
T28223 630-642 GO:0044228 denotes cell surface
T4732 688-696 SP_10 denotes SARS-CoV
T39879 697-707 GO:0035376 denotes cell entry
T1727 761-771 SP_7 denotes SARS-CoV-2
T64882 824-832 SP_10 denotes SARS-CoV
T9877 905-909 G_3;PG_10;PR:000003622 denotes ACE2
T10991 951-961 SP_7 denotes SARS-CoV-2
T10558 1031-1039 SP_10 denotes SARS-CoV

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
550 119-123 Gene denotes ACE2 Gene:59272
551 372-376 Gene denotes ACE2 Gene:59272
552 393-397 Gene denotes ACE2 Gene:59272
553 905-909 Gene denotes ACE2 Gene:59272
554 9-17 Species denotes SARS-CoV Tax:694009
555 330-340 Species denotes SARS-CoV-2 Tax:2697049
556 421-426 Species denotes human Tax:9606
557 688-696 Species denotes SARS-CoV Tax:694009
558 761-771 Species denotes SARS-CoV-2 Tax:2697049
559 824-832 Species denotes SARS-CoV Tax:694009
560 951-961 Species denotes SARS-CoV-2 Tax:2697049
561 1031-1039 Species denotes SARS-CoV Tax:694009
562 152-160 Gene denotes membrane Gene:43740571
563 310-318 Disease denotes COVID-19 MESH:C000657245
564 319-328 Disease denotes infection MESH:D007239
565 797-820 Disease denotes LF blocks the infection MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T255 95-100 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T256 161-168 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T257 259-266 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T258 278-295 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T259 358-363 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T260 427-431 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T261 432-457 Body_part denotes alveolar epithelial cells http://purl.org/sig/ont/fma/fma62499
T262 452-457 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T263 459-470 Body_part denotes enterocytes http://purl.org/sig/ont/fma/fma62122
T264 478-493 Body_part denotes small intestine http://purl.org/sig/ont/fma/fma7200
T265 503-515 Body_part denotes brush border http://purl.org/sig/ont/fma/fma70977
T266 540-545 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T267 553-559 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T268 566-571 Body_part denotes HSPGs http://purl.org/sig/ont/fma/fma82834
T269 630-642 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T270 630-634 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T271 697-701 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T272 781-786 Body_part denotes HSPGs http://purl.org/sig/ont/fma/fma82834
T273 847-852 Body_part denotes HSPGs http://purl.org/sig/ont/fma/fma82834
T274 931-936 Body_part denotes HSPGs http://purl.org/sig/ont/fma/fma82834
T275 979-984 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T46 278-295 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T47 427-431 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T48 478-493 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T49 484-493 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160
T50 553-559 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T50 9-17 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 43-76 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T52 310-318 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T53 319-328 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T54 330-338 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T55 688-696 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T56 761-769 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T57 811-820 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T58 824-832 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T59 951-959 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T60 1031-1039 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T301 95-100 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T302 152-160 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T303 181-182 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T304 219-226 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T305 358-363 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T306 421-426 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T307 427-431 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T308 427-431 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T309 441-451 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T310 452-457 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T311 478-493 http://purl.obolibrary.org/obo/UBERON_0002108 denotes small intestine
T312 540-545 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T313 553-559 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T314 553-559 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T315 553-559 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T316 566-571 http://purl.obolibrary.org/obo/PR_000001307 denotes HSPGs
T317 630-634 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T318 697-701 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T319 781-786 http://purl.obolibrary.org/obo/PR_000001307 denotes HSPGs
T320 847-852 http://purl.obolibrary.org/obo/PR_000001307 denotes HSPGs
T321 931-936 http://purl.obolibrary.org/obo/PR_000001307 denotes HSPGs
T322 979-984 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T298 161-168 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T299 797-799 Chemical denotes LF http://purl.obolibrary.org/obo/CHEBI_73585
T300 893-895 Chemical denotes LF http://purl.obolibrary.org/obo/CHEBI_73585

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T167 0-130 Sentence denotes The 2003 SARS-CoV strain, that also causes severe acute respiratory syndrome, attaches to host cells via host receptor ACE2 (171).
T168 131-302 Sentence denotes This type I integral membrane protein receptor is a well-known receptor for respiratory viruses, and is abundantly expressed in tissues lining the respiratory tract (111).
T169 303-392 Sentence denotes During COVID-19 infection, SARS-CoV-2 also enters host cells via the ACE2 receptor (172).
T170 393-565 Sentence denotes ACE2 is highly expressed on human lung alveolar epithelial cells, enterocytes of the small intestine, and the brush border of the proximal tubular cells of the kidney (99).
T171 566-713 Sentence denotes HSPGs are also one of the preliminary docking sites on the host cell surface and play an important role in the process of SARS-CoV cell entry (99).
T172 714-858 Sentence denotes There is no current confirmed information that SARS-CoV-2 binds to HSPGs, however, LF blocks the infection of SARS-CoV by binding to HSPGs (99).
T173 859-942 Sentence denotes It is not presently known whether LF binds to ACE2, but it does bind to HSPGs (99).
T174 943-1079 Sentence denotes Whether SARS-CoV-2 also enters host cells via HPSGs in the same way, as does (the 2003) SARS-CoV clearly warrants further investigation.

MyTest

Id Subject Object Predicate Lexical cue
32574271-31996437-34514722 125-128 31996437 denotes 171
32574271-29142129-34514723 297-300 29142129 denotes 111
32574271-32167747-34514724 387-390 32167747 denotes 172
32574271-21887302-34514725 561-563 21887302 denotes 99
32574271-21887302-34514726 709-711 21887302 denotes 99
32574271-21887302-34514727 854-856 21887302 denotes 99
32574271-21887302-34514728 938-940 21887302 denotes 99

TEST0

Id Subject Object Predicate Lexical cue
32574271-125-132-2882314 125-128 ["31996437"] denotes 171
32574271-166-173-2882315 297-300 ["29142129"] denotes 111
32574271-84-91-2882316 387-390 ["32167747"] denotes 172
32574271-168-174-2882317 561-563 ["21887302"] denotes 99
32574271-143-149-2882318 709-711 ["21887302"] denotes 99
32574271-140-146-2882319 854-856 ["21887302"] denotes 99
32574271-79-85-2882320 938-940 ["21887302"] denotes 99

2_test

Id Subject Object Predicate Lexical cue
32574271-31996437-34514722 125-128 31996437 denotes 171
32574271-29142129-34514723 297-300 29142129 denotes 111
32574271-32167747-34514724 387-390 32167747 denotes 172
32574271-21887302-34514725 561-563 21887302 denotes 99
32574271-21887302-34514726 709-711 21887302 denotes 99
32574271-21887302-34514727 854-856 21887302 denotes 99
32574271-21887302-34514728 938-940 21887302 denotes 99