PMC:7271924 / 20196-21278
Annnotations
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T365 | 0-8 | SP_7 | denotes | COVID-19 |
| T366 | 22-34 | SP_7 | denotes | severe acute |
| T367 | 35-46 | SP_7;UBERON:0001004 | denotes | respiratory |
| T368 | 47-69 | SP_7 | denotes | syndrome coronavirus 2 |
| T369 | 71-81 | SP_7 | denotes | SARS-CoV-2 |
| T370 | 89-97 | SP_7 | denotes | COVID-19 |
| T371 | 121-132 | UBERON:0001004 | denotes | respiratory |
| T372 | 174-183 | UBERON:0002048 | denotes | pulmonary |
| T373 | 194-198 | UBERON:0002048 | denotes | lung |
| T374 | 217-222 | UBERON:0002107 | denotes | liver |
| T375 | 224-229 | UBERON:0000948 | denotes | heart |
| T376 | 235-241 | UBERON:0002113 | denotes | kidney |
| T377 | 335-340 | UBERON:0001977 | denotes | serum |
| T378 | 368-373 | PR:000001136 | denotes | IL-1β |
| T379 | 375-379 | PR:000001379 | denotes | IL-2 |
| T380 | 381-385 | PR:000001317 | denotes | IL-7 |
| T381 | 387-391 | PR:000001395 | denotes | IL-8 |
| T382 | 393-397 | PR:000001396 | denotes | IL-9 |
| T383 | 399-404 | PR:000001471 | denotes | IL-10 |
| T384 | 406-411 | PR:000001092 | denotes | IL-17 |
| T385 | 413-424 | CL:0000094;PR:000005932 | denotes | granulocyte |
| T386 | 425-450 | PR:000005932 | denotes | colony-stimulating factor |
| T387 | 452-457 | PR:000005932 | denotes | G-CSF |
| T388 | 460-471 | CL:0000094;PR:000005931 | denotes | Granulocyte |
| T389 | 471-472 | PR:000005931 | denotes | - |
| T390 | 472-482 | PR:000005931;CL:0000235 | denotes | Macrophage |
| T391 | 483-508 | PR:000005931 | denotes | Colony Stimulating Factor |
| T392 | 510-516 | PR:000005931 | denotes | GM-CSF |
| T393 | 561-564 | PR:000000134 | denotes | TNF |
| T394 | 568-584 | PR:000000017 | denotes | Interferon gamma |
| T395 | 605-609 | PR:000006064 | denotes | IP10 |
| T396 | 612-620 | CL:0000576;PR:000002122 | denotes | Monocyte |
| T397 | 621-646 | PR:000002122 | denotes | Chemoattractant Protein-1 |
| T398 | 648-652 | PR:000002122 | denotes | MCP1 |
| T399 | 655-665 | CL:0000235 | denotes | macrophage |
| T400 | 689-693 | PR:000010164 | denotes | MIP1 |
| T401 | 700-705 | PR:000002124 | denotes | MIP1B |
| T402 | 713-718 | PR:000001383 | denotes | IL-22 |
| T403 | 742-747 | PR:000001092 | denotes | IL-17 |
| T404 | 796-803 | UBERON:0000912 | denotes | mucosal |
| T405 | 804-810 | UBERON:0000062 | denotes | organs |
| T406 | 812-817 | PR:000001383 | denotes | IL-22 |
| T407 | 843-853 | GO:0005577 | denotes | fibrinogen |
| T408 | 880-885 | UBERON:0001977 | denotes | serum |
| T409 | 886-893 | CHEBI:60425;CHEBI:60425 | denotes | amyloid |
| T410 | 894-895 | CHEBI:7989;CHEBI:7989 | denotes | A |
| T411 | 901-904 | CHEBI:16412;CHEBI:16412 | denotes | LPS |
| T412 | 980-984 | UBERON:0000104 | denotes | life |
| T413 | 1020-1026 | CHEBI:5054;CHEBI:5054 | denotes | fibrin |
| T414 | 1042-1050 | SP_10 | denotes | SARS-CoV |
| T415 | 1058-1066 | SP_10 | denotes | SARS-CoV |
| T21961 | 0-8 | SP_7 | denotes | COVID-19 |
| T57568 | 22-34 | SP_7 | denotes | severe acute |
| T48361 | 35-46 | SP_7;UBERON:0001004 | denotes | respiratory |
| T31522 | 47-69 | SP_7 | denotes | syndrome coronavirus 2 |
| T52636 | 71-81 | SP_7 | denotes | SARS-CoV-2 |
| T40297 | 89-97 | SP_7 | denotes | COVID-19 |
| T32589 | 121-132 | UBERON:0001004 | denotes | respiratory |
| T22216 | 174-183 | UBERON:0002048 | denotes | pulmonary |
| T80163 | 194-198 | UBERON:0002048 | denotes | lung |
| T48907 | 217-222 | UBERON:0002107 | denotes | liver |
| T80260 | 224-229 | UBERON:0000948 | denotes | heart |
| T48548 | 235-241 | UBERON:0002113 | denotes | kidney |
| T78411 | 335-340 | UBERON:0001977 | denotes | serum |
| T64057 | 368-373 | PR:000001136 | denotes | IL-1β |
| T80719 | 375-379 | PR:000001379 | denotes | IL-2 |
| T18104 | 381-385 | PR:000001317 | denotes | IL-7 |
| T12653 | 387-391 | PR:000001395 | denotes | IL-8 |
| T5166 | 393-397 | PR:000001396 | denotes | IL-9 |
| T68757 | 399-404 | PR:000001471 | denotes | IL-10 |
| T70368 | 406-411 | PR:000001092 | denotes | IL-17 |
| T81703 | 413-424 | CL:0000094;PR:000005932 | denotes | granulocyte |
| T27861 | 425-450 | PR:000005932 | denotes | colony-stimulating factor |
| T68228 | 452-457 | PR:000005932 | denotes | G-CSF |
| T27684 | 460-471 | CL:0000094;PR:000005931 | denotes | Granulocyte |
| T37450 | 471-472 | PR:000005931 | denotes | - |
| T20908 | 472-482 | PR:000005931;CL:0000235 | denotes | Macrophage |
| T23043 | 483-508 | PR:000005931 | denotes | Colony Stimulating Factor |
| T78990 | 510-516 | PR:000005931 | denotes | GM-CSF |
| T52267 | 561-564 | PR:000000134 | denotes | TNF |
| T4551 | 568-584 | PR:000000017 | denotes | Interferon gamma |
| T66153 | 605-609 | PR:000006064 | denotes | IP10 |
| T50343 | 612-620 | CL:0000576;PR:000002122 | denotes | Monocyte |
| T86908 | 621-646 | PR:000002122 | denotes | Chemoattractant Protein-1 |
| T10781 | 648-652 | PR:000002122 | denotes | MCP1 |
| T11661 | 655-665 | CL:0000235 | denotes | macrophage |
| T74644 | 689-693 | PR:000010164 | denotes | MIP1 |
| T69701 | 700-705 | PR:000002124 | denotes | MIP1B |
| T34323 | 713-718 | PR:000001383 | denotes | IL-22 |
| T81339 | 742-747 | PR:000001092 | denotes | IL-17 |
| T93339 | 796-803 | UBERON:0000912 | denotes | mucosal |
| T81526 | 804-810 | UBERON:0000062 | denotes | organs |
| T83671 | 812-817 | PR:000001383 | denotes | IL-22 |
| T1713 | 843-853 | GO:0005577 | denotes | fibrinogen |
| T59765 | 880-885 | UBERON:0001977 | denotes | serum |
| T26555 | 886-893 | CHEBI:60425;CHEBI:60425 | denotes | amyloid |
| T12741 | 894-895 | CHEBI:7989;CHEBI:7989 | denotes | A |
| T22604 | 901-904 | CHEBI:16412;CHEBI:16412 | denotes | LPS |
| T73519 | 980-984 | UBERON:0000104 | denotes | life |
| T59462 | 1020-1026 | CHEBI:5054;CHEBI:5054 | denotes | fibrin |
| T33264 | 1042-1050 | SP_10 | denotes | SARS-CoV |
| T67515 | 1058-1066 | SP_10 | denotes | SARS-CoV |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 500 | 375-379 | Gene | denotes | IL-2 | Gene:3558 |
| 501 | 381-385 | Gene | denotes | IL-7 | Gene:3574 |
| 502 | 387-391 | Gene | denotes | IL-8 | Gene:3576 |
| 503 | 393-397 | Gene | denotes | IL-9 | Gene:3578 |
| 504 | 399-404 | Gene | denotes | IL-10 | Gene:3586 |
| 505 | 406-411 | Gene | denotes | IL-17 | Gene:3605 |
| 506 | 413-450 | Gene | denotes | granulocyte colony-stimulating factor | Gene:1440 |
| 507 | 452-457 | Gene | denotes | G-CSF | Gene:1440 |
| 508 | 460-508 | Gene | denotes | Granulocyte-Macrophage Colony Stimulating Factor | Gene:1437 |
| 509 | 510-516 | Gene | denotes | GM-CSF | Gene:1437 |
| 510 | 538-566 | Gene | denotes | tumor necrosis factor (TNF)α | Gene:7124 |
| 511 | 605-609 | Gene | denotes | IP10 | Gene:3627 |
| 512 | 612-646 | Gene | denotes | Monocyte Chemoattractant Protein-1 | Gene:6347 |
| 513 | 655-695 | Gene | denotes | macrophage inflammatory protein 1(MIP1)A | Gene:57521 |
| 514 | 700-705 | Gene | denotes | MIP1B | Gene:6351 |
| 515 | 713-718 | Gene | denotes | IL-22 | Gene:50616 |
| 516 | 742-747 | Gene | denotes | IL-17 | Gene:3605 |
| 517 | 752-756 | Gene | denotes | TNFα | Gene:7124 |
| 518 | 812-817 | Gene | denotes | IL-22 | Gene:50616 |
| 519 | 901-920 | Gene | denotes | LPS binding protein | Gene:3929 |
| 520 | 939-944 | Gene | denotes | IL-22 | Gene:50616 |
| 521 | 22-69 | Species | denotes | severe acute respiratory syndrome coronavirus 2 | Tax:2697049 |
| 522 | 71-81 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 523 | 98-106 | Species | denotes | patients | Tax:9606 |
| 524 | 1042-1050 | Species | denotes | SARS-CoV | Tax:694009 |
| 525 | 1058-1066 | Species | denotes | SARS-CoV | Tax:694009 |
| 526 | 1067-1075 | Species | denotes | patients | Tax:9606 |
| 527 | 0-8 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 528 | 89-97 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 529 | 115-150 | Disease | denotes | acute respiratory distress syndrome | MESH:D012128 |
| 530 | 152-156 | Disease | denotes | ARDS | MESH:D012128 |
| 531 | 174-189 | Disease | denotes | pulmonary edema | MESH:D011654 |
| 532 | 194-206 | Disease | denotes | lung failure | MESH:D012131 |
| 533 | 997-1003 | Disease | denotes | oedema | MESH:D004487 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T221 | 194-198 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T222 | 217-222 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
| T223 | 224-229 | Body_part | denotes | heart | http://purl.org/sig/ont/fma/fma7088 |
| T224 | 235-241 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
| T225 | 288-296 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
| T226 | 335-340 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
| T227 | 351-362 | Body_part | denotes | interleukin | http://purl.org/sig/ont/fma/fma86578 |
| T228 | 364-366 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T229 | 368-372 | Body_part | denotes | IL-1 | http://purl.org/sig/ont/fma/fma86583 |
| T230 | 368-370 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T231 | 375-379 | Body_part | denotes | IL-2 | http://purl.org/sig/ont/fma/fma84051 |
| T232 | 375-377 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T233 | 381-383 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T234 | 387-389 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T235 | 393-395 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T236 | 399-401 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T237 | 406-408 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T238 | 413-424 | Body_part | denotes | granulocyte | http://purl.org/sig/ont/fma/fma62854 |
| T239 | 454-457 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
| T240 | 460-471 | Body_part | denotes | Granulocyte | http://purl.org/sig/ont/fma/fma62854 |
| T241 | 472-482 | Body_part | denotes | Macrophage | http://purl.org/sig/ont/fma/fma63261 |
| T242 | 513-516 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
| T243 | 593-600 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T244 | 612-620 | Body_part | denotes | Monocyte | http://purl.org/sig/ont/fma/fma62864 |
| T245 | 637-644 | Body_part | denotes | Protein | http://purl.org/sig/ont/fma/fma67257 |
| T246 | 655-665 | Body_part | denotes | macrophage | http://purl.org/sig/ont/fma/fma63261 |
| T247 | 679-686 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T248 | 713-715 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T249 | 742-744 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T250 | 812-814 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
| T251 | 870-878 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T252 | 880-885 | Body_part | denotes | serum | http://purl.org/sig/ont/fma/fma63083 |
| T253 | 913-920 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T254 | 939-941 | Body_part | denotes | IL | http://purl.org/sig/ont/fma/fma86578 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T39 | 194-198 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T40 | 217-222 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T41 | 224-229 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
| T42 | 235-241 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T43 | 335-340 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T44 | 804-810 | Body_part | denotes | organs | http://purl.obolibrary.org/obo/UBERON_0000062 |
| T45 | 880-885 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T37 | 0-8 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T38 | 22-69 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T39 | 22-55 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T40 | 71-79 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T41 | 89-97 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T42 | 115-150 | Disease | denotes | acute respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T43 | 121-150 | Disease | denotes | respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0009971 |
| T44 | 152-156 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T45 | 174-189 | Disease | denotes | pulmonary edema | http://purl.obolibrary.org/obo/MONDO_0006932 |
| T46 | 538-543 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
| T47 | 886-893 | Disease | denotes | amyloid | http://purl.obolibrary.org/obo/MONDO_0019065 |
| T48 | 1042-1050 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T49 | 1058-1066 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T275 | 194-198 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T276 | 194-198 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T277 | 217-222 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T278 | 217-222 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
| T279 | 224-229 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | heart |
| T280 | 224-229 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | heart |
| T281 | 224-229 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | heart |
| T282 | 224-229 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | heart |
| T283 | 235-241 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T284 | 235-241 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T285 | 235-241 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T286 | 286-287 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T287 | 375-379 | http://purl.obolibrary.org/obo/PR_000001379 | denotes | IL-2 |
| T288 | 387-391 | http://purl.obolibrary.org/obo/CLO_0053704 | denotes | IL-8 |
| T289 | 413-450 | http://purl.obolibrary.org/obo/PR_000005932 | denotes | granulocyte colony-stimulating factor |
| T290 | 452-457 | http://purl.obolibrary.org/obo/PR_000005932 | denotes | G-CSF |
| T291 | 568-584 | http://purl.obolibrary.org/obo/PR_000000017 | denotes | Interferon gamma |
| T292 | 612-620 | http://purl.obolibrary.org/obo/CL_0000576 | denotes | Monocyte |
| T293 | 694-695 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T294 | 716-718 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T295 | 780-788 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | peptides |
| T296 | 804-810 | http://purl.obolibrary.org/obo/UBERON_0003103 | denotes | organs |
| T297 | 815-817 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T298 | 894-895 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T299 | 942-944 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T300 | 1051-1053 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T246 | 364-366 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T249 | 368-370 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T252 | 375-377 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T255 | 381-383 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T258 | 387-389 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T261 | 393-395 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T264 | 399-401 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T267 | 406-408 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T270 | 510-512 | Chemical | denotes | GM | http://purl.obolibrary.org/obo/CHEBI_74120 |
| T271 | 519-529 | Chemical | denotes | interferon | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T272 | 531-534 | Chemical | denotes | IFN | http://purl.obolibrary.org/obo/CHEBI_52999 |
| T273 | 568-603 | Chemical | denotes | Interferon gamma-induced protein 10 | http://purl.obolibrary.org/obo/CHEBI_138157 |
| T274 | 579-584 | Chemical | denotes | gamma | http://purl.obolibrary.org/obo/CHEBI_30212 |
| T275 | 593-600 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T276 | 637-644 | Chemical | denotes | Protein | http://purl.obolibrary.org/obo/CHEBI_16541 |
| T277 | 679-686 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T278 | 713-715 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T281 | 742-744 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T284 | 766-779 | Chemical | denotes | antimicrobial | http://purl.obolibrary.org/obo/CHEBI_33281 |
| T285 | 780-788 | Chemical | denotes | peptides | http://purl.obolibrary.org/obo/CHEBI_16670 |
| T286 | 812-814 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
| T289 | 870-878 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T290 | 880-895 | Chemical | denotes | serum amyloid A | http://purl.obolibrary.org/obo/CHEBI_138152 |
| T291 | 901-904 | Chemical | denotes | LPS | http://purl.obolibrary.org/obo/CHEBI_16412|http://purl.obolibrary.org/obo/CHEBI_52603|http://purl.obolibrary.org/obo/CHEBI_89981 |
| T294 | 913-920 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T295 | 939-941 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072|http://purl.obolibrary.org/obo/CHEBI_52998 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T48 | 544-552 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
| T49 | 544-552 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
| T50 | 544-552 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
| T51 | 544-552 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
| T52 | 967-976 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T162 | 0-83 | Sentence | denotes | COVID-19 is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). |
| T163 | 84-250 | Sentence | denotes | Many COVID-19 patients develop acute respiratory distress syndrome (ARDS), which leads to pulmonary edema and lung failure, and have liver, heart, and kidney damages. |
| T164 | 251-712 | Sentence | denotes | These symptoms are associated with a cytokine storm (166, 167) manifesting elevated serum levels of interleukin (IL) IL-1β, IL-2, IL-7, IL-8, IL-9, IL-10, IL-17, granulocyte colony-stimulating factor (G-CSF), Granulocyte-Macrophage Colony Stimulating Factor (GM-CSF), interferon (IFN)γ, tumor necrosis factor (TNF)α, Interferon gamma-induced protein 10 (IP10), Monocyte Chemoattractant Protein-1 (MCP1), macrophage inflammatory protein 1(MIP1)A and MIP1B (168). |
| T165 | 713-811 | Sentence | denotes | IL-22, in collaboration with IL-17 and TNFα, induces antimicrobial peptides in the mucosal organs. |
| T166 | 812-1082 | Sentence | denotes | IL-22 also upregulates mucins, fibrinogen, anti-apoptotic proteins, serum amyloid A, and LPS binding protein (169); therefore, IL-22 may contribute to the formation of life-threatening oedema with mucins and fibrin (170), seen in SARS-CoV-22 and SARS-CoV patients (168). |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T8 | 121-141 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
| T9 | 174-189 | Phenotype | denotes | pulmonary edema | http://purl.obolibrary.org/obo/HP_0100598 |
| T10 | 235-249 | Phenotype | denotes | kidney damages | http://purl.obolibrary.org/obo/HP_0000112 |
| T11 | 288-302 | Phenotype | denotes | cytokine storm | http://purl.obolibrary.org/obo/HP_0033041 |
| T12 | 538-543 | Phenotype | denotes | tumor | http://purl.obolibrary.org/obo/HP_0002664 |
| T13 | 997-1003 | Phenotype | denotes | oedema | http://purl.obolibrary.org/obo/HP_0000969 |
MyTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32574271-32192578-34514716 | 304-307 | 32192578 | denotes | 166 |
| 32574271-28778104-34514717 | 309-312 | 28778104 | denotes | 167 |
| 32574271-32205092-34514718 | 707-710 | 32205092 | denotes | 168 |
| 32574271-31022687-34514719 | 922-925 | 31022687 | denotes | 169 |
| 32574271-14990596-34514720 | 1028-1031 | 14990596 | denotes | 170 |
| 32574271-32205092-34514721 | 1077-1080 | 32205092 | denotes | 168 |
TEST0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32574271-220-227-2882308 | 304-307 | ["32192578"] | denotes | 166 |
| 32574271-58-65-2882309 | 309-312 | ["28778104"] | denotes | 167 |
| 32574271-224-231-2882310 | 707-710 | ["32205092"] | denotes | 168 |
| 32574271-110-117-2882311 | 922-925 | ["31022687"] | denotes | 169 |
| 32574271-216-223-2882312 | 1028-1031 | ["14990596"] | denotes | 170 |
| 32574271-234-241-2882313 | 1077-1080 | ["32205092"] | denotes | 168 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32574271-32192578-34514716 | 304-307 | 32192578 | denotes | 166 |
| 32574271-28778104-34514717 | 309-312 | 28778104 | denotes | 167 |
| 32574271-32205092-34514718 | 707-710 | 32205092 | denotes | 168 |
| 32574271-31022687-34514719 | 922-925 | 31022687 | denotes | 169 |
| 32574271-14990596-34514720 | 1028-1031 | 14990596 | denotes | 170 |
| 32574271-32205092-34514721 | 1077-1080 | 32205092 | denotes | 168 |