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PMC:7271924 / 17768-19166 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T305 78-87 NCBITaxon:39107 denotes Moraxella
T306 166-177 PR:000016261 denotes transferrin
T307 225-234 NCBITaxon:2 denotes bacterial
T308 292-300 NCBITaxon:2 denotes bacteria
T309 308-320 CHEBI:26672;CHEBI:26672 denotes siderophores
T310 438-449 GO:0051235 denotes sequestered
T311 453-457 GO:0018995 denotes host
T312 458-469 PR:000016261 denotes transferrin
T313 471-482 PR:000009978 denotes lactoferrin
T314 531-539 GO:0016020 denotes membrane
T315 603-617 GO:0019867 denotes outer membrane
T316 619-623 PR:000022758 denotes TbpA
T317 628-639 PR:000016261 denotes transferrin
T318 653-664 PR:000009978 denotes lactoferrin
T319 711-722 PR:000009978 denotes lactoferrin
T320 723-734 PR:000016261 denotes transferrin
T321 755-759 PR:P34123 denotes TbpB
T322 764-775 PR:000016261 denotes transferrin
T323 789-800 PR:000009978 denotes lactoferrin
T324 834-845 PR:000009978 denotes lactoferrin
T325 855-859 PR:P34123 denotes TbpB
T326 880-891 PR:000016261 denotes transferrin
T327 931-936 SP_6;NCBITaxon:9606 denotes human
T328 937-941 UBERON:0001913 denotes milk
T329 1015-1023 NCBITaxon:2 denotes bacteria
T330 1028-1039 CHEBI:30808;CHEBI:30808 denotes ferric iron
T331 1058-1071 GO:0008283 denotes proliferation
T332 1178-1187 NCBITaxon:2 denotes bacterial
T333 1243-1247 GO:0006968 denotes host
T334 1248-1255 GO:0006952 denotes defense
T335 1355-1361 GO:0045087 denotes innate
T336 1366-1374 GO:0002250 denotes adaptive
T337 1375-1381 GO:0002250;UBERON:0002405 denotes immune
T338 1382-1391 GO:0002250 denotes responses
T26947 78-87 NCBITaxon:39107 denotes Moraxella
T65420 166-177 PR:000016261 denotes transferrin
T21588 225-234 NCBITaxon:2 denotes bacterial
T49891 292-300 NCBITaxon:2 denotes bacteria
T30797 308-320 CHEBI:26672;CHEBI:26672 denotes siderophores
T12367 438-449 GO:0051235 denotes sequestered
T80327 453-457 GO:0018995 denotes host
T77009 458-469 PR:000016261 denotes transferrin
T40949 471-482 PR:000009978 denotes lactoferrin
T66596 531-539 GO:0016020 denotes membrane
T73998 603-617 GO:0019867 denotes outer membrane
T64162 619-623 PR:000022758 denotes TbpA
T34393 628-639 PR:000016261 denotes transferrin
T65453 653-664 PR:000009978 denotes lactoferrin
T27946 711-722 PR:000009978 denotes lactoferrin
T46165 723-734 PR:000016261 denotes transferrin
T57015 755-759 PR:P34123 denotes TbpB
T55928 764-775 PR:000016261 denotes transferrin
T97295 789-800 PR:000009978 denotes lactoferrin
T99285 834-845 PR:000009978 denotes lactoferrin
T38439 855-859 PR:P34123 denotes TbpB
T87300 880-891 PR:000016261 denotes transferrin
T90222 931-936 SP_6;NCBITaxon:9606 denotes human
T78826 937-941 UBERON:0001913 denotes milk
T31225 1015-1023 NCBITaxon:2 denotes bacteria
T47845 1028-1039 CHEBI:30808;CHEBI:30808 denotes ferric iron
T96516 1058-1071 GO:0008283 denotes proliferation
T81850 1178-1187 NCBITaxon:2 denotes bacterial
T70301 1243-1247 GO:0006968 denotes host
T95712 1248-1255 GO:0006952 denotes defense
T65079 1355-1361 GO:0045087 denotes innate
T33909 1366-1374 GO:0002250 denotes adaptive
T42958 1375-1381 GO:0002250;UBERON:0002405 denotes immune
T16651 1382-1391 GO:0002250 denotes responses

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
428 166-177 Gene denotes transferrin Gene:7018
429 458-469 Gene denotes transferrin Gene:7018
430 471-482 Gene denotes lactoferrin Gene:280846
431 619-623 Gene denotes TbpA Gene:7276
432 628-639 Gene denotes transferrin Gene:7018
433 653-664 Gene denotes lactoferrin Gene:280846
434 711-722 Gene denotes lactoferrin Gene:280846
435 723-734 Gene denotes transferrin Gene:7018
436 764-775 Gene denotes transferrin Gene:7018
437 789-800 Gene denotes lactoferrin Gene:280846
438 834-845 Gene denotes lactoferrin Gene:280846
439 880-891 Gene denotes transferrin Gene:7018
440 609-617 Gene denotes membrane Gene:43740571
441 185-200 Species denotes N. meningitidis Tax:487
442 249-257 Species denotes children Tax:9606
443 931-936 Species denotes human Tax:9606
444 531-539 Gene denotes membrane Gene:43740571
445 140-144 Chemical denotes iron MESH:D007501
446 345-349 Chemical denotes iron MESH:D007501
447 433-437 Chemical denotes iron MESH:D007501
448 587-591 Chemical denotes iron MESH:D007501
449 699-703 Chemical denotes iron MESH:D007501
450 1028-1039 Chemical denotes ferric iron
451 57-73 Disease denotes genera Neisseria MESH:D006069
452 225-245 Disease denotes bacterial meningitis MESH:D016920
453 357-366 Disease denotes Neisseria MESH:D006069

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T201 391-398 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T202 488-498 Body_part denotes hemoglobin http://purl.org/sig/ont/fma/fma62293
T203 673-684 Body_part denotes lipoprotein http://purl.org/sig/ont/fma/fma63169
T204 937-941 Body_part denotes milk http://purl.org/sig/ont/fma/fma62100

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T36 826-830 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T37 872-876 Body_part denotes lobe http://purl.obolibrary.org/obo/UBERON_3010752
T38 937-941 Body_part denotes milk http://purl.obolibrary.org/obo/UBERON_0001913

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T31 225-245 Disease denotes bacterial meningitis http://purl.obolibrary.org/obo/MONDO_0006670
T32 235-245 Disease denotes meningitis http://purl.obolibrary.org/obo/MONDO_0004796|http://purl.obolibrary.org/obo/MONDO_0021108

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T234 204-205 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T235 292-300 http://purl.obolibrary.org/obo/NCBITaxon_2 denotes bacteria
T236 367-370 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T237 379-380 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T238 529-530 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T239 531-539 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T240 609-617 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T241 671-672 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T242 931-936 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T243 1015-1023 http://purl.obolibrary.org/obo/NCBITaxon_2 denotes bacteria
T244 1218-1219 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T245 1340-1341 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T224 140-144 Chemical denotes iron http://purl.obolibrary.org/obo/CHEBI_18248
T225 159-161 Chemical denotes LF http://purl.obolibrary.org/obo/CHEBI_73585
T226 308-320 Chemical denotes siderophores http://purl.obolibrary.org/obo/CHEBI_26672
T227 345-349 Chemical denotes iron http://purl.obolibrary.org/obo/CHEBI_18248
T228 391-398 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T229 433-437 Chemical denotes iron http://purl.obolibrary.org/obo/CHEBI_18248
T230 488-498 Chemical denotes hemoglobin http://purl.obolibrary.org/obo/CHEBI_35143
T231 587-591 Chemical denotes iron http://purl.obolibrary.org/obo/CHEBI_18248
T232 673-684 Chemical denotes lipoprotein http://purl.obolibrary.org/obo/CHEBI_6495
T233 699-703 Chemical denotes iron http://purl.obolibrary.org/obo/CHEBI_18248
T234 925-927 Chemical denotes LF http://purl.obolibrary.org/obo/CHEBI_73585
T235 1028-1039 Chemical denotes ferric iron http://purl.obolibrary.org/obo/CHEBI_29034
T236 1035-1039 Chemical denotes iron http://purl.obolibrary.org/obo/CHEBI_18248
T237 1122-1124 Chemical denotes LF http://purl.obolibrary.org/obo/CHEBI_73585
T238 1199-1201 Chemical denotes LF http://purl.obolibrary.org/obo/CHEBI_73585

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T42 391-411 http://purl.obolibrary.org/obo/GO_0015031 denotes protein transporters
T43 546-557 http://purl.obolibrary.org/obo/GO_0006810 denotes transporter
T44 576-586 http://purl.obolibrary.org/obo/GO_0006810 denotes transports
T45 723-753 http://purl.obolibrary.org/obo/GO_0033572 denotes transferrin to the transporter
T46 742-753 http://purl.obolibrary.org/obo/GO_0006810 denotes transporter
T47 1366-1391 http://purl.obolibrary.org/obo/GO_0002250 denotes adaptive immune responses

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T144 0-184 Sentence denotes Several Gram-negative pathogens including members of the genera Neisseria and Moraxella have evolved two-component systems that can extract iron from the host LF and transferrin (157).
T145 185-258 Sentence denotes N. meningitidis is a principal cause of bacterial meningitis in children.
T146 259-505 Sentence denotes While the majority of pathogenic bacteria employ siderophores to chelate and scavenge iron (158), Neisseria has evolved a series of protein transporters that directly hijack iron sequestered in host transferrin, lactoferrin, and hemoglobin (159).
T147 506-808 Sentence denotes The system consists of a membrane-bound transporter that extracts and transports iron across the outer membrane (TbpA for transferrin and LbpA for lactoferrin), and a lipoprotein that delivers iron-loaded lactoferrin/transferrin to the transporter (TbpB for transferrin and LbpB for lactoferrin) (157).
T148 809-898 Sentence denotes LbpB binds the N-lobe of lactoferrin, whereas TbpB binds the C-lobe of transferrin (157).
T149 899-1111 Sentence denotes However, more than 90% of LF in human milk is in the form of apolactoferrin (160), which competes with siderophilic bacteria for ferric iron, and disrupts the proliferation of these microbial and other pathogens.
T150 1112-1198 Sentence denotes Similarly LF supplements may play an important role to counteract bacterial processes.
T151 1199-1315 Sentence denotes LF is consequently a significant element of host defense (19), and its levels may vary in health and during disease.
T152 1316-1398 Sentence denotes It is hence known to be a modulator of innate and adaptive immune responses (161).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 235-245 Phenotype denotes meningitis http://purl.obolibrary.org/obo/HP_0001287

MyTest

Id Subject Object Predicate Lexical cue
32574271-25286931-34514697 179-182 25286931 denotes 157
32574271-18675317-34514698 351-354 18675317 denotes 158
32574271-10383753-34514699 500-503 10383753 denotes 159
32574271-25286931-34514700 803-806 25286931 denotes 157
32574271-25286931-34514701 893-896 25286931 denotes 157
32574271-7359228-34514702 976-979 7359228 denotes 160
32574271-28914813-34514703 1257-1259 28914813 denotes 19
32574271-27234406-34514704 1393-1396 27234406 denotes 161

TEST0

Id Subject Object Predicate Lexical cue
32574271-179-186-2882289 179-182 ["25286931"] denotes 157
32574271-92-99-2882290 351-354 ["18675317"] denotes 158
32574271-235-242-2882291 500-503 ["10383753"] denotes 159
32574271-231-238-2882292 803-806 ["25286931"] denotes 157
32574271-84-91-2882293 893-896 ["25286931"] denotes 157
32574271-77-84-2882294 976-979 ["7359228"] denotes 160
32574271-58-64-2882295 1257-1259 ["28914813"] denotes 19
32574271-77-84-2882296 1393-1396 ["27234406"] denotes 161

2_test

Id Subject Object Predicate Lexical cue
32574271-25286931-34514697 179-182 25286931 denotes 157
32574271-18675317-34514698 351-354 18675317 denotes 158
32574271-10383753-34514699 500-503 10383753 denotes 159
32574271-25286931-34514700 803-806 25286931 denotes 157
32574271-25286931-34514701 893-896 25286931 denotes 157
32574271-7359228-34514702 976-979 7359228 denotes 160
32574271-28914813-34514703 1257-1259 28914813 denotes 19
32574271-27234406-34514704 1393-1396 27234406 denotes 161