PMC:7269710 / 9285-11218 JSON TXT

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LitCovid-PubTator

LitCovid-PD-FMA-UBERON

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T7","span":{"begin":1448,"end":1454},"obj":"Body_part"},{"id":"T8","span":{"begin":1525,"end":1530},"obj":"Body_part"},{"id":"T9","span":{"begin":1550,"end":1554},"obj":"Body_part"},{"id":"T10","span":{"begin":1588,"end":1593},"obj":"Body_part"}],"attributes":[{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma228738"},{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma46472"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma9576"}],"text":"36 individuals were confirmed to have COVID-19, and these people were related to three local clusters, referred to as A (containing 11 people), B (consisting of 20 individuals), and C (comprising five people; figure 1 ). Of these affected individuals, 17 tested positive for SARS-CoV-2 in Singapore, of whom only two (both from cluster C) had recent travel history to China 14 days before onset of symptoms (table ). Two people from cluster A and 17 from cluster B were reported by the health authorities of countries where they resided or travelled to.\nFigure 1 Timing of events and cases in three clusters of COVID-19 in Singapore\nAge and sex are shown for each case (left panels), with other pertinent information (eg, relationship or nationality). Timeline of events (right panels); onset dates of symptomatic cases are shown, when available. COVID-19=coronavirus disease 2019.\nTable Demographic, clinical, and radiological characteristics of individuals who tested positive for SARS-CoV-2 in Singapore\nIndividuals (n=17)\nAge (years) 40 (36–51)\nGender\nMale 7 (41%)\nFemale 10 (59%)\nEthnic origin\nChinese 16 (94%)\nOther 1 (6%)\nNationality\nSingaporean 13 (76%)\nChinese 3 (18%)\nIndonesian 1 (6%)\nCluster\nA (tourist group from China and shopworkers) 9 (53%)\nB (company conference) 3 (18%)\nC (church) 5 (29%)\nChronic illness\nYes* 3 (18%)\nNo 14 (82%)\nTravel to China in past 14 days\nYes 2 (12%)\nNo 15 (88%)\nSymptoms\nFever 15 (88%)\nCough 14 (82%)\nSore throat 8 (47%)\nShortness of breath 6 (35%)\nMyalgia 5 (29%)\nDiarrhoea 4 (24%)\nChest pain 3 (18%)\nRunny nose 1 (6%)\nNausea or vomiting 1 (6%)\nChest radiography findings on admission†\nPresent 8 (53%)\nAbsent 7 (47%)\nInterval between symptom onset and hospitalisation (days) 4 (3–9)\nData are median (IQR) or n (%). SARS-CoV-2=severe acute respiratory syndrome coronavirus 2.\n* Allergic rhinitis (n=1), hypertension (n=1), and cervical spondylosis (n=1).\n† Data available for 15 individuals."}

LitCovid-PD-UBERON

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T4","span":{"begin":1448,"end":1454},"obj":"Body_part"},{"id":"T5","span":{"begin":1525,"end":1530},"obj":"Body_part"},{"id":"T6","span":{"begin":1550,"end":1554},"obj":"Body_part"},{"id":"T7","span":{"begin":1588,"end":1593},"obj":"Body_part"}],"attributes":[{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A6","pred":"uberon_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/UBERON_0000004"},{"id":"A7","pred":"uberon_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"}],"text":"36 individuals were confirmed to have COVID-19, and these people were related to three local clusters, referred to as A (containing 11 people), B (consisting of 20 individuals), and C (comprising five people; figure 1 ). Of these affected individuals, 17 tested positive for SARS-CoV-2 in Singapore, of whom only two (both from cluster C) had recent travel history to China 14 days before onset of symptoms (table ). Two people from cluster A and 17 from cluster B were reported by the health authorities of countries where they resided or travelled to.\nFigure 1 Timing of events and cases in three clusters of COVID-19 in Singapore\nAge and sex are shown for each case (left panels), with other pertinent information (eg, relationship or nationality). Timeline of events (right panels); onset dates of symptomatic cases are shown, when available. COVID-19=coronavirus disease 2019.\nTable Demographic, clinical, and radiological characteristics of individuals who tested positive for SARS-CoV-2 in Singapore\nIndividuals (n=17)\nAge (years) 40 (36–51)\nGender\nMale 7 (41%)\nFemale 10 (59%)\nEthnic origin\nChinese 16 (94%)\nOther 1 (6%)\nNationality\nSingaporean 13 (76%)\nChinese 3 (18%)\nIndonesian 1 (6%)\nCluster\nA (tourist group from China and shopworkers) 9 (53%)\nB (company conference) 3 (18%)\nC (church) 5 (29%)\nChronic illness\nYes* 3 (18%)\nNo 14 (82%)\nTravel to China in past 14 days\nYes 2 (12%)\nNo 15 (88%)\nSymptoms\nFever 15 (88%)\nCough 14 (82%)\nSore throat 8 (47%)\nShortness of breath 6 (35%)\nMyalgia 5 (29%)\nDiarrhoea 4 (24%)\nChest pain 3 (18%)\nRunny nose 1 (6%)\nNausea or vomiting 1 (6%)\nChest radiography findings on admission†\nPresent 8 (53%)\nAbsent 7 (47%)\nInterval between symptom onset and hospitalisation (days) 4 (3–9)\nData are median (IQR) or n (%). SARS-CoV-2=severe acute respiratory syndrome coronavirus 2.\n* Allergic rhinitis (n=1), hypertension (n=1), and cervical spondylosis (n=1).\n† Data available for 15 individuals."}

LitCovid-PD-MONDO

LitCovid-PD-CLO

LitCovid-PD-CHEBI

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T9","span":{"begin":1215,"end":1220},"obj":"Chemical"}],"attributes":[{"id":"A9","pred":"chebi_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"}],"text":"36 individuals were confirmed to have COVID-19, and these people were related to three local clusters, referred to as A (containing 11 people), B (consisting of 20 individuals), and C (comprising five people; figure 1 ). Of these affected individuals, 17 tested positive for SARS-CoV-2 in Singapore, of whom only two (both from cluster C) had recent travel history to China 14 days before onset of symptoms (table ). Two people from cluster A and 17 from cluster B were reported by the health authorities of countries where they resided or travelled to.\nFigure 1 Timing of events and cases in three clusters of COVID-19 in Singapore\nAge and sex are shown for each case (left panels), with other pertinent information (eg, relationship or nationality). Timeline of events (right panels); onset dates of symptomatic cases are shown, when available. COVID-19=coronavirus disease 2019.\nTable Demographic, clinical, and radiological characteristics of individuals who tested positive for SARS-CoV-2 in Singapore\nIndividuals (n=17)\nAge (years) 40 (36–51)\nGender\nMale 7 (41%)\nFemale 10 (59%)\nEthnic origin\nChinese 16 (94%)\nOther 1 (6%)\nNationality\nSingaporean 13 (76%)\nChinese 3 (18%)\nIndonesian 1 (6%)\nCluster\nA (tourist group from China and shopworkers) 9 (53%)\nB (company conference) 3 (18%)\nC (church) 5 (29%)\nChronic illness\nYes* 3 (18%)\nNo 14 (82%)\nTravel to China in past 14 days\nYes 2 (12%)\nNo 15 (88%)\nSymptoms\nFever 15 (88%)\nCough 14 (82%)\nSore throat 8 (47%)\nShortness of breath 6 (35%)\nMyalgia 5 (29%)\nDiarrhoea 4 (24%)\nChest pain 3 (18%)\nRunny nose 1 (6%)\nNausea or vomiting 1 (6%)\nChest radiography findings on admission†\nPresent 8 (53%)\nAbsent 7 (47%)\nInterval between symptom onset and hospitalisation (days) 4 (3–9)\nData are median (IQR) or n (%). SARS-CoV-2=severe acute respiratory syndrome coronavirus 2.\n* Allergic rhinitis (n=1), hypertension (n=1), and cervical spondylosis (n=1).\n† Data available for 15 individuals."}

LitCovid-sentences

LitCovid-PD-HP

{"project":"LitCovid-PD-HP","denotations":[{"id":"T4","span":{"begin":1413,"end":1418},"obj":"Phenotype"},{"id":"T5","span":{"begin":1428,"end":1433},"obj":"Phenotype"},{"id":"T6","span":{"begin":1443,"end":1454},"obj":"Phenotype"},{"id":"T7","span":{"begin":1463,"end":1482},"obj":"Phenotype"},{"id":"T8","span":{"begin":1491,"end":1498},"obj":"Phenotype"},{"id":"T9","span":{"begin":1507,"end":1516},"obj":"Phenotype"},{"id":"T10","span":{"begin":1525,"end":1535},"obj":"Phenotype"},{"id":"T11","span":{"begin":1544,"end":1554},"obj":"Phenotype"},{"id":"T12","span":{"begin":1562,"end":1580},"obj":"Phenotype"},{"id":"T13","span":{"begin":1820,"end":1837},"obj":"Phenotype"},{"id":"T14","span":{"begin":1845,"end":1857},"obj":"Phenotype"},{"id":"T15","span":{"begin":1869,"end":1889},"obj":"Phenotype"}],"attributes":[{"id":"A4","pred":"hp_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A5","pred":"hp_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/HP_0012735"},{"id":"A6","pred":"hp_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/HP_0033050"},{"id":"A7","pred":"hp_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/HP_0002098"},{"id":"A8","pred":"hp_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/HP_0003326"},{"id":"A9","pred":"hp_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/HP_0002014"},{"id":"A10","pred":"hp_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/HP_0100749"},{"id":"A11","pred":"hp_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/HP_0031417"},{"id":"A12","pred":"hp_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/HP_0002017"},{"id":"A13","pred":"hp_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/HP_0003193"},{"id":"A14","pred":"hp_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/HP_0000822"},{"id":"A15","pred":"hp_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/HP_0008480"}],"text":"36 individuals were confirmed to have COVID-19, and these people were related to three local clusters, referred to as A (containing 11 people), B (consisting of 20 individuals), and C (comprising five people; figure 1 ). Of these affected individuals, 17 tested positive for SARS-CoV-2 in Singapore, of whom only two (both from cluster C) had recent travel history to China 14 days before onset of symptoms (table ). Two people from cluster A and 17 from cluster B were reported by the health authorities of countries where they resided or travelled to.\nFigure 1 Timing of events and cases in three clusters of COVID-19 in Singapore\nAge and sex are shown for each case (left panels), with other pertinent information (eg, relationship or nationality). Timeline of events (right panels); onset dates of symptomatic cases are shown, when available. COVID-19=coronavirus disease 2019.\nTable Demographic, clinical, and radiological characteristics of individuals who tested positive for SARS-CoV-2 in Singapore\nIndividuals (n=17)\nAge (years) 40 (36–51)\nGender\nMale 7 (41%)\nFemale 10 (59%)\nEthnic origin\nChinese 16 (94%)\nOther 1 (6%)\nNationality\nSingaporean 13 (76%)\nChinese 3 (18%)\nIndonesian 1 (6%)\nCluster\nA (tourist group from China and shopworkers) 9 (53%)\nB (company conference) 3 (18%)\nC (church) 5 (29%)\nChronic illness\nYes* 3 (18%)\nNo 14 (82%)\nTravel to China in past 14 days\nYes 2 (12%)\nNo 15 (88%)\nSymptoms\nFever 15 (88%)\nCough 14 (82%)\nSore throat 8 (47%)\nShortness of breath 6 (35%)\nMyalgia 5 (29%)\nDiarrhoea 4 (24%)\nChest pain 3 (18%)\nRunny nose 1 (6%)\nNausea or vomiting 1 (6%)\nChest radiography findings on admission†\nPresent 8 (53%)\nAbsent 7 (47%)\nInterval between symptom onset and hospitalisation (days) 4 (3–9)\nData are median (IQR) or n (%). SARS-CoV-2=severe acute respiratory syndrome coronavirus 2.\n* Allergic rhinitis (n=1), hypertension (n=1), and cervical spondylosis (n=1).\n† Data available for 15 individuals."}

PMC:7269710 / 9285-11218 JSONTXT

Annnotations TAB JSON ListView MergeView

PMC:7269710 / 9285-11218 JSON TXT