> top > docs > PMC:7269710 > spans > 9285-11218 > annotations

PMC:7269710 / 9285-11218 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
133 611-619 Disease denotes COVID-19 MESH:C000657245
136 633-636 Gene denotes Age Gene:5973
137 856-880 Disease denotes coronavirus disease 2019 MESH:C000657245
148 1026-1029 Gene denotes Age Gene:5973
149 1307-1322 Disease denotes Chronic illness MESH:D002908
150 1404-1418 Disease denotes Symptoms Fever MESH:D051271
151 1428-1433 Disease denotes Cough MESH:D003371
152 1463-1482 Disease denotes Shortness of breath MESH:D004417
153 1491-1498 Disease denotes Myalgia MESH:D063806
154 1507-1516 Disease denotes Diarrhoea MESH:D003967
155 1531-1535 Disease denotes pain MESH:D010146
156 1562-1568 Disease denotes Nausea MESH:D009325
157 1572-1580 Disease denotes vomiting MESH:D014839
159 983-993 Species denotes SARS-CoV-2 Tax:2697049
162 1758-1768 Species denotes SARS-CoV-2 Tax:2697049
163 1769-1816 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
167 1820-1837 Disease denotes Allergic rhinitis MESH:D065631
168 1845-1857 Disease denotes hypertension MESH:D006973
169 1869-1889 Disease denotes cervical spondylosis MESH:D055009
176 58-64 Species denotes people Tax:9606
177 135-141 Species denotes people Tax:9606
178 201-207 Species denotes people Tax:9606
179 275-285 Species denotes SARS-CoV-2 Tax:2697049
180 421-427 Species denotes people Tax:9606
181 38-46 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T7 1448-1454 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T8 1525-1530 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T9 1550-1554 Body_part denotes nose http://purl.org/sig/ont/fma/fma46472
T10 1588-1593 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T4 1448-1454 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341
T5 1525-1530 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T6 1550-1554 Body_part denotes nose http://purl.obolibrary.org/obo/UBERON_0000004
T7 1588-1593 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T55 38-46 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T56 275-283 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T57 611-619 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T58 847-855 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T59 856-880 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T60 983-991 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T61 1443-1454 Disease denotes Sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T62 1507-1516 Disease denotes Diarrhoea http://purl.obolibrary.org/obo/MONDO_0001673
T63 1544-1554 Disease denotes Runny nose http://purl.obolibrary.org/obo/MONDO_0003014
T64 1758-1766 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T65 1769-1816 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T66 1769-1802 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T67 1820-1837 Disease denotes Allergic rhinitis http://purl.obolibrary.org/obo/MONDO_0011786
T68 1829-1837 Disease denotes rhinitis http://purl.obolibrary.org/obo/MONDO_0003014
T69 1845-1857 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T70 1878-1889 Disease denotes spondylosis http://purl.obolibrary.org/obo/MONDO_0002253

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T49 0-2 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T50 118-119 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T51 132-134 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T52 144-145 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T53 255-261 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T54 441-442 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T55 463-464 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T56 963-969 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T57 1042-1044 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T58 1056-1060 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T59 1056-1060 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T60 1064-1066 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T61 1069-1075 http://purl.obolibrary.org/obo/UBERON_0003100 denotes Female
T62 1111-1113 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T63 1173-1175 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T64 1204-1205 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T65 1257-1258 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T66 1283-1285 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T67 1331-1333 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T68 1486-1488 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T69 1525-1530 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T70 1539-1541 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T71 1550-1554 http://www.ebi.ac.uk/efo/EFO_0000828 denotes nose
T72 1588-1593 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T9 1215-1220 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T80 0-220 Sentence denotes 36 individuals were confirmed to have COVID-19, and these people were related to three local clusters, referred to as A (containing 11 people), B (consisting of 20 individuals), and C (comprising five people; figure 1 ).
T81 221-416 Sentence denotes Of these affected individuals, 17 tested positive for SARS-CoV-2 in Singapore, of whom only two (both from cluster C) had recent travel history to China 14 days before onset of symptoms (table ).
T82 417-553 Sentence denotes Two people from cluster A and 17 from cluster B were reported by the health authorities of countries where they resided or travelled to.
T83 554-632 Sentence denotes Figure 1 Timing of events and cases in three clusters of COVID-19 in Singapore
T84 633-751 Sentence denotes Age and sex are shown for each case (left panels), with other pertinent information (eg, relationship or nationality).
T85 752-846 Sentence denotes Timeline of events (right panels); onset dates of symptomatic cases are shown, when available.
T86 847-881 Sentence denotes COVID-19=coronavirus disease 2019.
T87 882-1006 Sentence denotes Table Demographic, clinical, and radiological characteristics of individuals who tested positive for SARS-CoV-2 in Singapore
T88 1007-1025 Sentence denotes Individuals (n=17)
T89 1026-1048 Sentence denotes Age (years) 40 (36–51)
T90 1049-1055 Sentence denotes Gender
T91 1056-1068 Sentence denotes Male 7 (41%)
T92 1069-1084 Sentence denotes Female 10 (59%)
T93 1085-1098 Sentence denotes Ethnic origin
T94 1099-1115 Sentence denotes Chinese 16 (94%)
T95 1116-1128 Sentence denotes Other 1 (6%)
T96 1129-1140 Sentence denotes Nationality
T97 1141-1161 Sentence denotes Singaporean 13 (76%)
T98 1162-1177 Sentence denotes Chinese 3 (18%)
T99 1178-1195 Sentence denotes Indonesian 1 (6%)
T100 1196-1203 Sentence denotes Cluster
T101 1204-1256 Sentence denotes A (tourist group from China and shopworkers) 9 (53%)
T102 1257-1287 Sentence denotes B (company conference) 3 (18%)
T103 1288-1306 Sentence denotes C (church) 5 (29%)
T104 1307-1322 Sentence denotes Chronic illness
T105 1323-1335 Sentence denotes Yes* 3 (18%)
T106 1336-1347 Sentence denotes No 14 (82%)
T107 1348-1379 Sentence denotes Travel to China in past 14 days
T108 1380-1391 Sentence denotes Yes 2 (12%)
T109 1392-1403 Sentence denotes No 15 (88%)
T110 1404-1412 Sentence denotes Symptoms
T111 1413-1427 Sentence denotes Fever 15 (88%)
T112 1428-1442 Sentence denotes Cough 14 (82%)
T113 1443-1462 Sentence denotes Sore throat 8 (47%)
T114 1463-1490 Sentence denotes Shortness of breath 6 (35%)
T115 1491-1506 Sentence denotes Myalgia 5 (29%)
T116 1507-1524 Sentence denotes Diarrhoea 4 (24%)
T117 1525-1543 Sentence denotes Chest pain 3 (18%)
T118 1544-1561 Sentence denotes Runny nose 1 (6%)
T119 1562-1587 Sentence denotes Nausea or vomiting 1 (6%)
T120 1588-1628 Sentence denotes Chest radiography findings on admission†
T121 1629-1644 Sentence denotes Present 8 (53%)
T122 1645-1659 Sentence denotes Absent 7 (47%)
T123 1660-1725 Sentence denotes Interval between symptom onset and hospitalisation (days) 4 (3–9)
T124 1726-1757 Sentence denotes Data are median (IQR) or n (%).
T125 1758-1817 Sentence denotes SARS-CoV-2=severe acute respiratory syndrome coronavirus 2.
T126 1818-1896 Sentence denotes * Allergic rhinitis (n=1), hypertension (n=1), and cervical spondylosis (n=1).
T127 1897-1933 Sentence denotes † Data available for 15 individuals.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T4 1413-1418 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T5 1428-1433 Phenotype denotes Cough http://purl.obolibrary.org/obo/HP_0012735
T6 1443-1454 Phenotype denotes Sore throat http://purl.obolibrary.org/obo/HP_0033050
T7 1463-1482 Phenotype denotes Shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T8 1491-1498 Phenotype denotes Myalgia http://purl.obolibrary.org/obo/HP_0003326
T9 1507-1516 Phenotype denotes Diarrhoea http://purl.obolibrary.org/obo/HP_0002014
T10 1525-1535 Phenotype denotes Chest pain http://purl.obolibrary.org/obo/HP_0100749
T11 1544-1554 Phenotype denotes Runny nose http://purl.obolibrary.org/obo/HP_0031417
T12 1562-1580 Phenotype denotes Nausea or vomiting http://purl.obolibrary.org/obo/HP_0002017
T13 1820-1837 Phenotype denotes Allergic rhinitis http://purl.obolibrary.org/obo/HP_0003193
T14 1845-1857 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T15 1869-1889 Phenotype denotes cervical spondylosis http://purl.obolibrary.org/obo/HP_0008480