PMC:7267510 / 13934-14532
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T59 | 76-80 | Body_part | denotes | neck | http://purl.org/sig/ont/fma/fma7155 |
| T60 | 87-91 | Body_part | denotes | Neck | http://purl.org/sig/ont/fma/fma7155 |
| T61 | 132-138 | Body_part | denotes | tonsil | http://purl.org/sig/ont/fma/fma9609 |
| T62 | 271-275 | Body_part | denotes | neck | http://purl.org/sig/ont/fma/fma7155 |
| T63 | 300-304 | Body_part | denotes | neck | http://purl.org/sig/ont/fma/fma7155 |
| T64 | 369-375 | Body_part | denotes | tonsil | http://purl.org/sig/ont/fma/fma9609 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T54 | 76-80 | Body_part | denotes | neck | http://purl.obolibrary.org/obo/UBERON_0000974 |
| T55 | 87-91 | Body_part | denotes | Neck | http://purl.obolibrary.org/obo/UBERON_0000974 |
| T56 | 132-138 | Body_part | denotes | tonsil | http://purl.obolibrary.org/obo/UBERON_0002372 |
| T57 | 271-275 | Body_part | denotes | neck | http://purl.obolibrary.org/obo/UBERON_0000974 |
| T58 | 300-304 | Body_part | denotes | neck | http://purl.obolibrary.org/obo/UBERON_0000974 |
| T59 | 369-375 | Body_part | denotes | tonsil | http://purl.obolibrary.org/obo/UBERON_0002372 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T102 | 59-63 | Disease | denotes | SCCA | http://purl.obolibrary.org/obo/MONDO_0005096 |
| T103 | 407-416 | Disease | denotes | Papilloma | http://purl.obolibrary.org/obo/MONDO_0002363 |
| T104 | 437-441 | Disease | denotes | SCCA | http://purl.obolibrary.org/obo/MONDO_0005096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T137 | 32-33 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T138 | 43-47 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
| T139 | 43-47 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
| T140 | 76-80 | http://www.ebi.ac.uk/efo/EFO_0000967 | denotes | neck |
| T141 | 87-91 | http://www.ebi.ac.uk/efo/EFO_0000967 | denotes | Neck |
| T142 | 132-138 | http://purl.obolibrary.org/obo/UBERON_0002372 | denotes | tonsil |
| T143 | 271-275 | http://www.ebi.ac.uk/efo/EFO_0000967 | denotes | neck |
| T144 | 300-304 | http://www.ebi.ac.uk/efo/EFO_0000967 | denotes | neck |
| T145 | 369-375 | http://purl.obolibrary.org/obo/UBERON_0002372 | denotes | tonsil |
| T146 | 401-406 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | Human |
| T147 | 417-422 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | Virus |
| T148 | 542-543 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T9 | 43-47 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 111-117 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T40 | 59-63 | Phenotype | denotes | SCCA | http://purl.obolibrary.org/obo/HP_0002860 |
| T41 | 407-416 | Phenotype | denotes | Papilloma | http://purl.obolibrary.org/obo/HP_0012740 |
| T42 | 437-441 | Phenotype | denotes | SCCA | http://purl.obolibrary.org/obo/HP_0002860 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T102 | 0-352 | Sentence | denotes | 15 March 31, 2020 University A 56‐y‐old male with FNA + SCCA cystic left neck mass Neck mass, progressive, growth, cystic, left tonsil suspicious, but not enough for office biopsy Direct laryngoscopy with biopsy, bronchoscopy, esophagoscopy, tonsillectomy, possible neck mass excision, possible neck dissection Approved, Reduce extent of surgery. |
| T103 | 353-442 | Sentence | denotes | High risk Left tonsil removed and positive for Human Papilloma Virus (HPV)‐related SCCA. |
| T104 | 443-525 | Sentence | denotes | Did not perform panendosopy and contralateral tonsillectomy as originally planned. |
| T105 | 526-598 | Sentence | denotes | Would have been a TORS candidate but will go for radiation therapy (RT). |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 319 | 401-422 | Species | denotes | Human Papilloma Virus | Tax:10566 |
| 335 | 424-427 | Species | denotes | HPV | Tax:10566 |