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PMC:7267243 / 5959-6766 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
196 413-416 Gene denotes lap Gene:7939
197 331-335 Species denotes hMPV Tax:162145
198 337-358 Species denotes human metapneumovirus Tax:162145
199 15-19 Disease denotes ARDS MESH:D012128
200 21-56 Disease denotes acute respiratory distress syndrome MESH:D012128
201 111-115 Disease denotes COPD MESH:D029424
202 117-154 Disease denotes chronic obstructive pulmonary disease MESH:D029424
203 241-247 Disease denotes Cancer MESH:D009369
204 297-329 Disease denotes chronic obstructive lung disease MESH:D029424
205 365-397 Disease denotes invasive pulmonary aspergillosis MESH:D055744

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T8 98-102 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T9 317-321 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T10 437-458 Body_part denotes lumbar vertebral body http://purl.org/sig/ont/fma/fma16075

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 317-321 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T4 444-453 Body_part denotes vertebral http://purl.obolibrary.org/obo/UBERON_3010224

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T77 15-19 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T78 21-56 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T79 27-56 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T80 111-154 Disease denotes COPD, chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005002
T81 137-154 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275
T82 241-247 Disease denotes Cancer http://purl.obolibrary.org/obo/MONDO_0004992
T83 248-255 Disease denotes Mycoses http://purl.obolibrary.org/obo/MONDO_0002041
T84 297-329 Disease denotes chronic obstructive lung disease http://purl.obolibrary.org/obo/MONDO_0005002
T85 305-329 Disease denotes obstructive lung disease http://purl.obolibrary.org/obo/MONDO_0002267
T86 317-329 Disease denotes lung disease http://purl.obolibrary.org/obo/MONDO_0005275
T87 384-397 Disease denotes aspergillosis http://purl.obolibrary.org/obo/MONDO_0005657
T88 675-677 Disease denotes TA http://purl.obolibrary.org/obo/MONDO_0017991

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T46 198-210 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T47 317-321 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T48 317-321 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T49 337-342 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T50 444-453 http://purl.obolibrary.org/obo/NCBITaxon_7742 denotes vertebral
T51 733-741 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T52 755-756 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T53 784-791 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T57 184-187 Chemical denotes MSG http://purl.obolibrary.org/obo/CHEBI_64220|http://purl.obolibrary.org/obo/CHEBI_64243
T59 269-273 Chemical denotes GOLD http://purl.obolibrary.org/obo/CHEBI_59965
T60 360-363 Chemical denotes IPA http://purl.obolibrary.org/obo/CHEBI_17824|http://purl.obolibrary.org/obo/CHEBI_30802
T62 475-478 Chemical denotes MIC http://purl.obolibrary.org/obo/CHEBI_59059
T63 590-592 Chemical denotes PY http://purl.obolibrary.org/obo/CHEBI_74799
T64 675-677 Chemical denotes TA http://purl.obolibrary.org/obo/CHEBI_74824

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T85 0-754 Sentence denotes Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation.
T86 755-805 Sentence denotes a Antifungal susceptibility testing by VIPcheck™.
T87 806-807 Sentence denotes 6

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T29 27-47 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T30 111-115 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T31 117-154 Phenotype denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/HP_0006510
T32 241-247 Phenotype denotes Cancer http://purl.obolibrary.org/obo/HP_0002664
T33 305-329 Phenotype denotes obstructive lung disease http://purl.obolibrary.org/obo/HP_0006536
T34 360-363 Phenotype denotes IPA http://purl.obolibrary.org/obo/HP_0020103
T35 365-397 Phenotype denotes invasive pulmonary aspergillosis http://purl.obolibrary.org/obo/HP_0020103